Hi Spencer,

thanks for bringing this to our attention. Since OS X 10.9 ships with scipy 
preinstalled, you can try this workaround which imports scipy from the system 
python:

import sys
sys.path.insert(1, 
'/System/Library/Frameworks/Python.framework/Versions/2.7/Extras/lib/python')
import scipy.linalg

Hope that helps.

Cheers,
  Thomas

On 25 Nov 2014, at 04:46, Spencer Bliven <sbli...@ucsd.edu> wrote:

> Importing scipy.linalg in MacPyMOL crashes the program for me. Probably the 
> linalg module shipped with MacPyMOL is corrupt or incorrectly linked. I've 
> reproduced it with MacPyMOL 1.6 and 1.7, with both X11 and aqua, and on Mac 
> OS 10.9 and 10.10.
> 
> I discovered this problem because importing the full pymol script repo 
> crashes, due to the pyanm plugin. Maybe this will save someone a headache in 
> the future.
> 
> -Spencer

-- 
Thomas Holder
PyMOL Principal Developer
Schrödinger, Inc.


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