Thanks for the workaround. It works for me, although it will be a bit hard
to incorporate into fully portable scripts. I think I'll avoid using scipy
where possible.
-Spencer
On Wed, Nov 26, 2014 at 6:09 PM, Thomas Holder <
thomas.hol...@schrodinger.com> wrote:
> Hi Spencer,
>
> thanks for bringing this to our attention. Since OS X 10.9 ships with
> scipy preinstalled, you can try this workaround which imports scipy from
> the system python:
>
> import sys
> sys.path.insert(1,
> '/System/Library/Frameworks/Python.framework/Versions/2.7/Extras/lib/python')
> import scipy.linalg
>
> Hope that helps.
>
> Cheers,
> Thomas
>
> On 25 Nov 2014, at 04:46, Spencer Bliven <sbli...@ucsd.edu> wrote:
>
> > Importing scipy.linalg in MacPyMOL crashes the program for me. Probably
> the linalg module shipped with MacPyMOL is corrupt or incorrectly linked.
> I've reproduced it with MacPyMOL 1.6 and 1.7, with both X11 and aqua, and
> on Mac OS 10.9 and 10.10.
> >
> > I discovered this problem because importing the full pymol script repo
> crashes, due to the pyanm plugin. Maybe this will save someone a headache
> in the future.
> >
> > -Spencer
>
> --
> Thomas Holder
> PyMOL Principal Developer
> Schrödinger, Inc.
>
>
------------------------------------------------------------------------------
Download BIRT iHub F-Type - The Free Enterprise-Grade BIRT Server
from Actuate! Instantly Supercharge Your Business Reports and Dashboards
with Interactivity, Sharing, Native Excel Exports, App Integration & more
Get technology previously reserved for billion-dollar corporations, FREE
http://pubads.g.doubleclick.net/gampad/clk?id=157005751&iu=/4140/ostg.clktrk
_______________________________________________
PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net)
Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users
Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
