Hello, everyone,
I've been trying use pymol to generate an image based on C-alpha coordinates
only. I tried to set the sphere to be transparency by the command "set
sphere_transparency, 0.5". However, the surface of the sphere shows some
shading which looks quite odd. If I ray trace the image, the surface looks nice
but it is solid rather than transparent. Any suggestions? Thanks.
Best,
Jett Song
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