Hi, It looks like the structure of PyMOL session (what we got from cmd.get_session) has changed in recent upgrades. I have to rewrite the program.
Does anyone know if there is a setting to export in the 'old' format? Best regards, Takanori Nakane On 2015/10/18 1:47, Osvaldo Martin wrote: > That really weird! the script is expecting a list but is getting an > integer. Could you send me the "my" molecule or a pse file with that > molecule? or at least other molecule that give you the same error? > > Cheers, > Osvaldo. > > > > On Sat, Oct 17, 2015 at 5:49 PM, Albert <mailmd2...@gmail.com> wrote: > >> Thanks a lot for further advice. >> >> Here is what I got: >> >> PyMOL> run exportToWeb.py >> PyMOL>exportToWeb my >> Traceback (most recent call last): >> File "/home/albert/install/pymol-1.7.6/modules/pymol/parser.py", line >> 256, in parse >> self.result=apply(layer.kw[0],layer.args,layer.kw_args) >> File "exportToWeb.py", line 118, in dump_rep >> ret += parseObjMol(obj) >> File "exportToWeb.py", line 50, in parseObjMol >> if (rep[5] == 1): >> TypeError: 'int' object has no attribute '__getitem__' >> >> >> If possible, would you please give me some suggestions? >> >> Thanks a lot >> >> Albert >> >> >> >> >> On 10/17/2015 04:36 PM, Osvaldo Martin wrote: >> >> Hi Albert, >> >> I do the following steps and I get a .html file as expected. >> >> 1. I download and unpack this >> >> <http://sourceforge.jp/projects/webglmol/downloads/54536/pymol-exporter-0.01.zip/> >> file. The script there seems to be similar to the one you attached. >> 2. Lauch PyMOL and do some stuff >> 3. cd to the folder creating during unpacking >> 4. run the script by doing >> >> run exportToWeb.py >> >> 5. then run the commnand >> >> exportToWeb PymolObjectName >> >> where PymolObjectName is the name of the pymol object you want to >> export >> 6. check the unpacked folder for a file with the name >> PymolObjectName.html >> >> Could you try to follow these steps and tell us what you get? >> >> Cheers, >> >> Osvaldo. >> >> >> > > > > ------------------------------------------------------------------------------ > > > > _______________________________________________ > PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) > Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users > Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net > ------------------------------------------------------------------------------ _______________________________________________ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
