Hello, After optimizing the Iron-sulfur clusters existing in the photosystem
I, the coordinates transforms to another frame, what I need to do is to
transfer back to the original coordinates by getting the transformation matrix.
here what I did ..using pymola1- I loaded post and pre-processing object2- I
aligned them together3- I tried to get the transformation matrix with this
commandprint cmd.get_object_matrix("pre-processing object")and this step
returns a 4*4 matrices (-0.017042629420757294, 0.6273888349533081,
-0.7785196304321289, -27.565351122804373, 0.15071848034858704,
0.7713475823402405, 0.6183096766471863, -142.13367787636093,
0.9884297847747803, -0.1067996621131897, -0.10770488530397415,
-81.02178268868633, 0.0, 0.0, 0.0, 1.0)finally, I used this command to apply
the matrix ...cmd.transform_object( "post_processing object",
[-0.017042625695466995, 0.15071852505207062, 0.9884297847747803,
101.03673254990264, 0.6273888349533081, 0.7713475823402405,
-0.10679969936609268, 118.27556096672724, -0.7785196304321289,
0.6183096766471863, -0.10770490765571594, 57.69601938212094, 0.0, 0.0, 0.0,
1.0])am I doing it in a correct way ??and I need to find the transformed
structure, how I could do it ?
Thank you, Fedaa Ali
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