Hello again, Here’s a simple command for selecting four specific atoms in the ligand hemoglobin (HEM): sele resn HEM & n. C1A+C3A+CHA+C4D
sele = select resn = residue name n. = atom name Best, Chris On Tue, May 5, 2020 at 10:38 Chris Fage <fage...@gmail.com> wrote: > Hello, > > You can always change the selection mode from residues to atoms (Mouse > > Selection Mode > Atoms, at least in my version of Pymol). Then, select the > appropriate atoms and change the color for that selection. I'm sure there > are more sophisticated ways of doing this with the command line, but you'll > need to know the PDB-formatted names of those atoms to do. That likely > requires clicking on the atoms of interest anyway. > > Best, > Chris > > > <http://www.avg.com/email-signature?utm_medium=email&utm_source=link&utm_campaign=sig-email&utm_content=webmail> > Virus-free. > www.avg.com > <http://www.avg.com/email-signature?utm_medium=email&utm_source=link&utm_campaign=sig-email&utm_content=webmail> > <#m_-6096387057778460689_DAB4FAD8-2DD7-40BB-A1B8-4E2AA1F9FDF2> > > On Tue, May 5, 2020 at 9:08 AM Полина Короткова <korotkova...@gmail.com> > wrote: > >> Hello, I’m new to PyMOL and I need your help. I want to color different >> carbons in molecule differently: 1 color - carbon at the beginning of a >> chain, 2 color - carbon in the middle and 3 color - carbon at the end of >> the chain. I need to do this for a few molecules. Is there a command to do >> that? I tried to create different objects and color them in needed colors, >> but maybe there is a simpler way. >> Thank you in advance. >> >> _______________________________________________ >> PyMOL-users mailing list >> Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net >> Unsubscribe: >> https://sourceforge.net/projects/pymol/lists/pymol-users/unsubscribe > >
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