Hi Neena, Not sure if I understand your question correctly, but if you are looking for the number of helix residues or the relative helix content, you can do this:
count_helix = cmd.count_atoms("guide & ss H") count_all = cmd.count_atoms("guide") print("Number of helix residues:", count_helix) print("Relative helix content:", count_helix / count_all) Cheers, Thomas On Sat, Sep 10, 2022 at 1:37 PM Neena Susan Eappen <neenasusan...@gmail.com> wrote: > Hello PyMOL users, > > Could I please get some insights on this? > > Thank you, > Neena > > On Wed, 7 Sept 2022 at 12:06, Neena Susan Eappen <neenasusan...@gmail.com> > wrote: > >> Hello PyMOL users, >> >> I was wondering how to extract the total extent of helicity between two >> peptide structures on Pymol. >> >> >> [image: image.png] >> [image: image.png] >> Any insight would be appreciated. >> >> Many thanks, >> Neena >> >> _______________________________________________ > PyMOL-users mailing list > Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net > Unsubscribe: > https://sourceforge.net/projects/pymol/lists/pymol-users/unsubscribe
_______________________________________________ PyMOL-users mailing list Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net Unsubscribe: https://sourceforge.net/projects/pymol/lists/pymol-users/unsubscribe