Ooops I forgot! numexpr also might use mkl....
Could you run the following code and report back the output?
import numexpr
print numexpr.use_vml
print numexpr.get_vml_version()
I bet numexpr was compiled expecting MKL, but since you don't have it, it
fails. Thanks!
On Thu, Oct 13, 2011 at 1:55 PM, Ranjit Chacko <rjcha...@gmail.com> wrote:
> I don't remember how I installed it now actually. Is there a way for me to
> check whether numpy is linked against MKL? I'm not sure how it could be
> though, since I don't have the MKL framework on my computer at all.
>
> On Oct 13, 2011, at 10/13/11 10:28 AM, Anthony Scopatz wrote:
>
> Hmmm, is this also how how are you getting numpy?
>
> It may be the case that if your numpy is linked against MKL, that then
> PyTables also needs to be linled against MKL.
>
> On Thu, Oct 13, 2011 at 12:00 PM, Ranjit Chacko <rjcha...@gmail.com>wrote:
>
>> I'm running Snow Leopard. I've tried installing pytables using both
>> easy_install, and by downloading the source and compiling. I get the same
>> errors either way.
>>
>> On Oct 13, 2011, at 10/13/11 7:55 AM, Anthony Scopatz wrote:
>>
>> Hmm... How did you install pytables? What platform are you on?
>>
>> On Thu, Oct 13, 2011 at 10:33 AM, Ranjit Chacko <rjcha...@gmail.com>wrote:
>>
>>> NumPy is working fine, and it passes all of its tests. I'm not sure why
>>> there's a reference to MKL in the PyTables error though because I don't have
>>> that installed on my machine. Also I can't find where the HDF5 1.8.5 headers
>>> might be. The only HDF5 libraries I can see on my machine are 1.8.7.
>>>
>>> Thanks,
>>>
>>> -Ranjit
>>>
>>> On Oct 12, 2011, at 10/12/11 9:15 PM, Anthony Scopatz wrote:
>>>
>>> Hello Ranjit,
>>>
>>> Does NumPy Work? To the best of my knowledge, numpy is the only thing in
>>> that stack that might link against the MKL. How are you getting numpy?
>>>
>>> Be Well
>>> Anthony
>>>
>>> On Wed, Oct 12, 2011 at 7:51 PM, Ranjit Chacko <rjcha...@gmail.com>wrote:
>>>
>>>> I just tried to install pytables, and when I run tables.test() I get the
>>>> following error:
>>>>
>>>>
>>>> -=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
>>>> PyTables version: 2.3
>>>> HDF5 version: 1.8.5-patch1
>>>> NumPy version: 2.0.0.dev-073bc39
>>>>
>>>>
>>>> *** libmkl_mc.dylib *** failed with error : dlopen(libmkl_mc.dylib, 1):
>>>> image not found
>>>> *** libmkl_mc.dylib *** failed with error : dlopen(libmkl_mc.dylib, 1):
>>>> image not found
>>>> MKL FATAL ERROR: Cannot load neither libmkl_mc.dylib nor libmkl_mc.dylib
>>>>
>>>>
>>>> Also when I try to open a new file I get a warning about the library
>>>> version being mismatched, and that "Headers are 1.8.5, library is 1.8.7".
>>>>
>>>> How do I fix this?
>>>>
>>>> Thanks,
>>>>
>>>> -Ranjit
>>>>
>>>>
>>>>
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