On Mar 7, 2012, at 3:14 PM, Francesc Alted wrote: > On Mar 7, 2012, at 1:57 PM, Chris Kees wrote: > >> Hi Anthony, >> >> I'm using 1.8.7 on ranger. Here is the topmost error: >> >> compile options: '-DNDEBUG=1 -DHAVE_BZ2_LIB=1 -Iblosc >> -I/work/01020/cekees/ranger.gnu/build/ranger.gnu/lib/python2.7/site-packages/numpy/core/include >> -I/work/01020/cekee >> s/ranger.gnu/build/ranger.gnu/include >> -I/work/01020/cekees/ranger.gnu/build/ranger.gnu/include/python2.7 -c' >> extra options: '-Isrc -DH5_USE_16_API' >> gcc: blosc/blosclz.c >> gcc: src/H5ARRAY.c >> In file included from >> /work/01020/cekees/ranger.gnu/build/ranger.gnu/include/python2.7/Python.h:8, >> from src/utils.h:1, >> from src/H5ARRAY.c:4: >> /work/01020/cekees/ranger.gnu/build/ranger.gnu/include/python2.7/pyconfig.h:1155:1: >> warning: "_POSIX_C_SOURCE" redefined >> In file included from >> /work/01020/cekees/ranger.gnu/build/ranger.gnu/include/H5public.h:37, >> from >> /work/01020/cekees/ranger.gnu/build/ranger.gnu/include/hdf5.h:24, >> from src/H5ATTR.h:19, >> from src/H5ARRAY.c:1: >> /share/apps/gcc_amd/4.4.5/bin/../lib/gcc/x86_64-unknown-linux-gnu/4.4.5/include-fixed/features.h:199:1: >> warning: this is the location of the previous definition >> In file included from >> /work/01020/cekees/ranger.gnu/build/ranger.gnu/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1972, >> from >> /work/01020/cekees/ranger.gnu/build/ranger.gnu/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:17, >> from >> /work/01020/cekees/ranger.gnu/build/ranger.gnu/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:15, >> from src/utils.h:2, >> from src/H5ARRAY.c:4: >> /work/01020/cekees/ranger.gnu/build/ranger.gnu/lib/python2.7/site-packages/numpy/core/include/numpy/npy_deprecated_api.h:11:2: >> warning: #warning "Using deprecated NumPy >> API, disable it by #defining NPY_NO_DEPRECATED_API" >> /work/01020/cekees/ranger.gnu/build/ranger.gnu/lib/python2.7/site-packages/numpy/core/include/numpy/__multiarray_api.h:1666: >> warning: '_import_array' defined but not use >> d >> gcc: blosc/blosc.c >> blosc/blosc.c:79: error: expected '=', ',', ';', 'asm' or '__attribute__' >> before 'barr_init' > > Uf, that looks really ugly. Which compiler and version are you using? Can > you look in this machine's thread.h and tell us the value of _POSIX_BARRIERS > symbol?
BTW, numexpr also uses the same parallel engine than blosc. As numexpr is a requisite for PyTables, I'm curious about if you have been able to compile it too. -- Francesc Alted ------------------------------------------------------------------------------ Virtualization & Cloud Management Using Capacity Planning Cloud computing makes use of virtualization - but cloud computing also focuses on allowing computing to be delivered as a service. http://www.accelacomm.com/jaw/sfnl/114/51521223/ _______________________________________________ Pytables-users mailing list Pytables-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/pytables-users
