Following Brian Ripley's advice:
> $ which g77
> /sw/bin/g77
I then found Makeconf, in
/Library/Frameworks/R.framework/Versions/2.0.1/Resources/etc
I edited it according to Brian's advice. It had:
> FLIBS = -L/usr/local/lib
> -L/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2
> -L/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2/../../.. -lfrtbegin
> -lg2c -lSystem
which now is:
> FLIBS = -L/usr/local/lib
> -L/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2
> -L/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2/../../.. -L/sw/bin
> -lg2c -lSystem
Nevertheless the install failed just as below. But the console
complaint was slightly different from before:
> WARNING: ignoring environment value of R_HOME
> * Installing *source* package 'Hmisc' ...
> ** libs
> g77 -fno-common -g -O2 -c cidxcn.f -o cidxcn.o
> g77 -fno-common -g -O2 -c cidxcp.f -o cidxcp.o
> g77 -fno-common -g -O2 -c hoeffd.f -o hoeffd.o
> g77 -fno-common -g -O2 -c jacklins.f -o jacklins.o
> g77 -fno-common -g -O2 -c largrec.f -o largrec.o
> gcc -no-cpp-precomp
> -I/Library/Frameworks/R.framework/Resources/include
> -I/usr/local/include -fno-common -g -O2 -c ranksort.c -o ranksort.o
> g77 -fno-common -g -O2 -c rcorr.f -o rcorr.o
> g77 -fno-common -g -O2 -c wclosest.f -o wclosest.o
> gcc -bundle -flat_namespace -undefined suppress -L/usr/local/lib -o
> Hmisc.so cidxcn.o cidxcp.o hoeffd.o jacklins.o largrec.o ranksort.o
> rcorr.o wclosest.o -L/usr/local/lib
> -L/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2
> -L/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2/../../.. -L/sw/bin
> -lg2c -lSystem -lcc_dynamic -framework R
> ld: warning -L: directory name
> (/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2) does not exist
> ld: warning -L: directory name
> (/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2/../../..) does not
> exist
> ld: can't locate file for: -lg2c
> make: *** [Hmisc.so] Error 1
> ERROR: compilation failed for package 'Hmisc'
> ** Removing
> '/Library/Frameworks/R.framework/Versions/2.0.1/Resources/library/
> Hmisc'
> ** Restoring previous
> '/Library/Frameworks/R.framework/Versions/2.0.1/Resources/library/
> Hmisc'
> On Feb 5, 2005, at 4:59 PM, Prof Brian Ripley wrote:
>
>> On Sat, 5 Feb 2005, Michael Kubovy wrote:
>>
>>> Frank Harrell suggested I re-post with information about the version
>>> of
>>> R
>>
>> Thanks, that starts to make sense. You appear to have g77 installed,
>> but not in the place the person who prepared the binary install of R
>> has it.
>> Where do you have it installed? ('whereis g77' or 'which g77' should
>> tell you.) Then you need to alter FLIBS in R_HOME/etc/Makeconf to
>> point to it. (You can remove -lfrtbegin from FLIBS: it is not
>> needed: your R_HOME looks to be
>> /Library/Frameworks/R.framework/Versions/2.0.1.)
>>
>> However, I believe there is a more fundamental problem: because
>> libg2c is a static library on current MacOS X, most packages using
>> Fortran cannot be compiled there. That's presumably the case with
>> Hmisc, as the automated package builder is not providing a binary
>> build. (There is supposedly a check directory on CRAN, but it is not
>> there at present.)
>>
>>>
>>> Heres's the information:
>>>>> version
>>>> _
>>>> platform powerpc-apple-darwin6.8
>>>> arch powerpc
>>>> os darwin6.8
>>>> system powerpc, darwin6.8
>>>> status
>>>> major 2
>>>> minor 0.1
>>>> year 2004
>>>> month 11
>>>> day 15
>>>> language R
>>>
>>> Here's what happens when I try to install:
>>>>> install.packages("Hmisc")
>>>> trying URL `http://cran.r-project.org/src/contrib/PACKAGES'
>>>> Content type `text/plain; charset=iso-8859-1' length 47565 bytes
>>>> opened URL
>>>> ==================================================
>>>> downloaded 46Kb
>>>>
>>>> trying URL
>>>> `http://cran.r-project.org/src/contrib/Hmisc_3.0-1.tar.gz'
>>>> Content type `application/x-tar' length 453567 bytes
>>>> opened URL
>>>> ==================================================
>>>> downloaded 442Kb
>>>>
>>>> Delete downloaded files (y/N)?
>>>>
>>>> The packages are in /tmp/Rtmp1911/Rinstdirfc4111
>>>> Warning message:
>>>> Installation of package Hmisc had non-zero exit status in:
>>>> install.packages("Hmisc")
>>>
>>> Here's what the Console had to say:
>>>> * Installing *source* package 'Hmisc' ...
>>>> ** libs
>>>> g77 -fno-common -g -O2 -c cidxcn.f -o cidxcn.o
>>>> g77 -fno-common -g -O2 -c cidxcp.f -o cidxcp.o
>>>> g77 -fno-common -g -O2 -c hoeffd.f -o hoeffd.o
>>>> g77 -fno-common -g -O2 -c jacklins.f -o jacklins.o
>>>> g77 -fno-common -g -O2 -c largrec.f -o largrec.o
>>>> gcc -no-cpp-precomp
>>>> -I/Library/Frameworks/R.framework/Resources/include
>>>> -I/usr/local/include -fno-common -g -O2 -c ranksort.c -o
>>>> ranksort.o
>>>> g77 -fno-common -g -O2 -c rcorr.f -o rcorr.o
>>>> g77 -fno-common -g -O2 -c wclosest.f -o wclosest.o
>>>> gcc -bundle -flat_namespace -undefined suppress -L/usr/local/lib -o
>>>> Hmisc.so cidxcn.o cidxcp.o hoeffd.o jacklins.o largrec.o ranksort.o
>>>> rcorr.o wclosest.o -L/usr/local/lib
>>>> -L/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2
>>>> -L/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2/../../..
>>>> -lfrtbegin
>>>> -lg2c -lSystem -lcc_dynamic -framework R
>>>> ld: warning -L: directory name
>>>> (/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2) does not exist
>>>> ld: warning -L: directory name
>>>> (/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2/../../..) does not
>>>> exist
>>>> ld: can't locate file for: -lfrtbegin
>>>> make: *** [Hmisc.so] Error 1
>>>> ERROR: compilation failed for package 'Hmisc'
>>>> ** Removing
>>>> '/Library/Frameworks/R.framework/Versions/2.0.1/Resources/library/
>>>> Hmisc'
>>>> ** Restoring previous
>>>> '/Library/Frameworks/R.framework/Versions/2.0.1/Resources/library/
>>>> Hmisc'
_____________________________
Professor Michael Kubovy
University of Virginia
Department of Psychology
USPS: P.O.Box 400400 Charlottesville, VA 22904-4400
Parcels: Room 102 Gilmer Hall
McCormick Road Charlottesville, VA 22903
Office: B011 +1-434-982-4729
Lab: B019 +1-434-982-4751
Fax: +1-434-982-4766
WWW: http://www.people.virginia.edu/~mk9y/
[[alternative text/enriched version deleted]]
______________________________________________
[email protected] mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html
