Hi all,
I have an interesting issue specific to the Mac R.app, but not to the command
line R or Rstudio.
I have looked through the archive, however most of the threads seem to be for
std packages, and further, most of what is said is a little beyond me, so any
help with the problem below would be really appreciated.
I have a locally developed library (libmlalgs), which I am able to install via
the command line:
sudo R64 CMD INSTALL libmlalgs
In the
/Library/Frameworks/R.framework/Versions/2.13/Resources/library/libmlalgs there
is a .so file
/Library/Frameworks/R.framework/Versions/2.13/Resources/library/libmlalgs/libs/x86_64/libmlalgs.so
This runs and installs OK.
I am able to run R64 in the command line and load the libmlalgs library fine :)
I am able to use Rstudio and load the libmlalgs library fine.
However, when using the R64.app and try and load the library within the GUI I
am getting the following error:
Error in dyn.load(file, DLLpath = DLLpath, ...) :
unable to load shared object
'/Library/Frameworks/R.framework/Versions/2.13/Resources/library/libmlalgs/libs/x86_64/libmlalgs.so':
dlopen(/Library/Frameworks/R.framework/Versions/2.13/Resources/library/libmlalgs/libs/x86_64/libmlalgs.so,
6): Library not loaded: libRblas.dylib
Referenced from:
/Library/Frameworks/R.framework/Versions/2.13/Resources/library/libmlalgs/libs/x86_64/libmlalgs.so
Reason: image not found
Error in library(libmlalgs) : .First.lib failed for 'libmlalgs'
I know the libmlalgs.so is in the right place and the permissions look OK:
-rwxr-xr-x 1 root admin 58384 3 Oct 14:30 libmlalgs.so
So I am stumped as to why the GUI is unable to read the file.
Any pointers would very welcome. As I am a textmate user and it passes the code
to the R64.app, I currently stuck with either command line or Rstudio (it's
nice but is currently missing some key features textmate has)
Specs:
Running Mac OSX 10.7.1
R version 2.13.1 Patched (2011-08-14 r56741)
Copyright (C) 2011 The R Foundation for Statistical Computing
ISBN 3-900051-07-0
Platform: x86_64-apple-darwin9.8.0/x86_64 (64-bit)
Many thanks,
Noel Faux
---------
NHMRC Post Doctoral Fellow
Australian Imaging Biomarker Lifestyle (AIBL) flagship
Mental Health Research Institute
---------
155 Oak St, Parkville
Victoria 3052
T: +613 9389 2943
---------
The University of Melbourne
Level 3, Alan Gilbert Building
161 Barry Street, Carlton
Victoria 3010
T: +613 8344 1944
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