On Oct 3, 2011, at 11:44 PM, Noel Faux wrote: > Hi Simon, > > Thanks for the info. However, following the download links from the R-project > home page, the only available binary on the Australian mirrors are R 2.13.1. > Should I use http://r.research.att.com/R-2.13-branch-leopard.pkg? >
You can, but simply pick a more up-to-date mirror or the main CRAN site. FWIW the master server for Mac releases is http://r.research.att.com/bin/macosx Cheers, Simon > Cheers, > Noel Faux > --------- > NHMRC Post Doctoral Fellow > Australian Imaging Biomarker Lifestyle (AIBL) flagship > Mental Health Research Institute > --------- > 155 Oak St, Parkville > Victoria 3052 > T: +613 9389 2943 > --------- > The University of Melbourne > Level 3, Alan Gilbert Building > 161 Barry Street, Carlton > Victoria 3010 > T: +613 8344 1944 > ---------------- > This email and any attachments are confidential. They may contain legally > privileged information or copyright material. You should not read, copy, use > or disclose them without authorisation. If you are not an intended recipient, > please contact us at once by return email and then delete both messages. We > do not accept liability in connection with computer virus, data corruption, > delay, interruption, unauthorised access or unauthorised amendment. > This notice should not be removed. > > > > > > > > On 04/10/2011, at 2:05 PM, Simon Urbanek wrote: > >> Noel, >> >> the package uses BLAS and your R is setup to build against vecLib BLAS which >> has bad ID so anything linked against it will have trouble finding libRblas. >> The simple fix is to switch to R BLAS instead of vecLib BLAS (see R for Mac >> FAQ 12.5). Alternatively update to R 2.13.2, the issue has been fixed in the >> CRAN binary distribution of R 2.13.2. >> >> Cheers, >> Simon >> >> >> On Oct 3, 2011, at 10:41 PM, Noel Faux wrote: >> >>> Hi all, >>> >>> I have an interesting issue specific to the Mac R.app, but not to the >>> command line R or Rstudio. >>> I have looked through the archive, however most of the threads seem to be >>> for std packages, and further, most of what is said is a little beyond me, >>> so any help with the problem below would be really appreciated. >>> >>> I have a locally developed library (libmlalgs), which I am able to install >>> via the command line: >>> sudo R64 CMD INSTALL libmlalgs >>> In the >>> /Library/Frameworks/R.framework/Versions/2.13/Resources/library/libmlalgs >>> there is a .so file >>> /Library/Frameworks/R.framework/Versions/2.13/Resources/library/libmlalgs/libs/x86_64/libmlalgs.so >>> >>> This runs and installs OK. >>> I am able to run R64 in the command line and load the libmlalgs library >>> fine :) >>> I am able to use Rstudio and load the libmlalgs library fine. >>> >>> However, when using the R64.app and try and load the library within the GUI >>> I am getting the following error: >>> Error in dyn.load(file, DLLpath = DLLpath, ...) : >>> unable to load shared object >>> '/Library/Frameworks/R.framework/Versions/2.13/Resources/library/libmlalgs/libs/x86_64/libmlalgs.so': >>> dlopen(/Library/Frameworks/R.framework/Versions/2.13/Resources/library/libmlalgs/libs/x86_64/libmlalgs.so, >>> 6): Library not loaded: libRblas.dylib >>> Referenced from: >>> /Library/Frameworks/R.framework/Versions/2.13/Resources/library/libmlalgs/libs/x86_64/libmlalgs.so >>> Reason: image not found >>> Error in library(libmlalgs) : .First.lib failed for 'libmlalgs' >>> >>> I know the libmlalgs.so is in the right place and the permissions look OK: >>> -rwxr-xr-x 1 root admin 58384 3 Oct 14:30 libmlalgs.so >>> >>> So I am stumped as to why the GUI is unable to read the file. >>> >>> Any pointers would very welcome. As I am a textmate user and it passes the >>> code to the R64.app, I currently stuck with either command line or Rstudio >>> (it's nice but is currently missing some key features textmate has) >>> >>> Specs: >>> Running Mac OSX 10.7.1 >>> R version 2.13.1 Patched (2011-08-14 r56741) >>> Copyright (C) 2011 The R Foundation for Statistical Computing >>> ISBN 3-900051-07-0 >>> Platform: x86_64-apple-darwin9.8.0/x86_64 (64-bit) >>> >>> Many thanks, >>> Noel Faux >>> >>> --------- >>> NHMRC Post Doctoral Fellow >>> Australian Imaging Biomarker Lifestyle (AIBL) flagship >>> Mental Health Research Institute >>> --------- >>> 155 Oak St, Parkville >>> Victoria 3052 >>> T: +613 9389 2943 >>> --------- >>> The University of Melbourne >>> Level 3, Alan Gilbert Building >>> 161 Barry Street, Carlton >>> Victoria 3010 >>> T: +613 8344 1944 >>> ---------------- >>> This email and any attachments are confidential. They ma...{{dropped:18}} >>> >>> _______________________________________________ >>> R-SIG-Mac mailing list >>> [email protected] >>> https://stat.ethz.ch/mailman/listinfo/r-sig-mac >>> >>> >> > _______________________________________________ R-SIG-Mac mailing list [email protected] https://stat.ethz.ch/mailman/listinfo/r-sig-mac
