Thanks, Steve Pointed out that it was probably a "fink" thing
I also had issues getting Rcurl to point at the latest version of libcurl
which was another "fink" think
I fink I have problems. hehe.. gallows humour.
So, I'm figuring my .profile or bash is busted.
CURL_CONFIG=/sw/bin/curl-config
DIRSTACK=()
DISPLAY=/tmp/launch-NfpUEf/org.x:0
DYLD_LIBRARY_PATH=/sw/lib:/usr/local/lib:
EUID=501
GROUPS=()
HISTFILE=/Users/mosher/.bash_history
HISTFILESIZE=500
HISTSIZE=500
HOME=/Users/mosher
HOSTNAME=mosher.local
HOSTTYPE=i386
IFS=$' \t\n'
LINES=24
LOGNAME=mosher
MACHTYPE=i386-apple-darwin9.0
MAILCHECK=60
MANPATH=/usr/share/man:/usr/local/share/man:/usr/X11/share/man:/usr/X11/man
OPTERR=1
OPTIND=1
OSTYPE=darwin9.0
PATH=/opt/subversion/bin/:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/bin:/usr/X11/bin:/usr/X11/bin:/sw/bin:sw/sbin:/usr/local/bin:usr/local/sbin:/usr/bin:usr/sbin:bin:sbin
PIPESTATUS=([0]="0")
PPID=2922
PS1='\s-\v\$ '
PS2='> '
PS4='+ '
PWD=/Users/mosher
SECURITYSESSIONID=a9cb40
SHELL=/bin/bash
SHELLOPTS=braceexpand:emacs:hashall:histexpand:history:interactive-comments:monitor
SHLVL=2
SSH_AUTH_SOCK=/tmp/launch-plLI4O/Listeners
TERM=xterm
TMPDIR=/var/folders/ea/eaXeR9KIEZSbgaDPdoLSwU+++TI/-Tmp-/
UID=501
USER=mosher
WINDOWID=8388621
X11_PREFS_DOMAIN=org.x.X11
XTERM_LOCALE=C
XTERM_SHELL=/bin/bash
XTERM_VERSION='XTerm(261)'
_=CURL_CONFIG
__CF_USER_TEXT_ENCODING=0x1F5:0:0
The ECHO PATH yields the following.
ECHO $PATH
/opt/subversion/bin/:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/bin:/usr/X11/bin:/usr/X11/bin:/sw/bin:sw/sbin:/usr/local/bin:usr/local/sbin:/usr/bin:usr/sbin:bin:sbin
bash-3.2$
bash-3.2$ otool -L
Library/Frameworks/R.framework/Versions/2.12/Resources/lib/libR.dylib
Library/Frameworks/R.framework/Versions/2.12/Resources/lib/libR.dylib:
/Library/Frameworks/R.framework/Versions/2.12/Resources/lib/libR.dylib
(compatibility version 2.12.0, current version 2.12.0)
/Library/Frameworks/R.framework/Versions/2.12/Resources/lib/libRblas.dylib
(compatibility version 0.0.0, current version 0.0.0)
/Library/Frameworks/R.framework/Versions/2.12/Resources/lib/libgfortran.2.dylib
(compatibility version 3.0.0, current version 3.0.0)
/System/Library/Frameworks/CoreFoundation.framework/Versions/A/CoreFoundation
(compatibility version 150.0.0, current version 476.19.0)
/Library/Frameworks/R.framework/Versions/2.12/Resources/lib/libreadline.5.2.dylib
(compatibility version 5.0.0, current version 5.2.0)
/usr/lib/libz.1.dylib (compatibility version 1.0.0, current version
1.2.3)
/usr/lib/libicucore.A.dylib (compatibility version 1.0.0, current
version 36.0.0)
/usr/lib/libSystem.B.dylib (compatibility version 1.0.0, current
version 111.1.5)
/usr/lib/libiconv.2.dylib (compatibility version 7.0.0, current
version 7.0.0)
/usr/lib/libgcc_s.1.dylib (compatibility version 1.0.0, current
version 1.0.0)
On Mon, Nov 15, 2010 at 12:20 PM, Berend Hasselman <b...@xs4all.nl> wrote:
>
> On 15-11-2010, at 20:45, steven mosher wrote:
>
> > I guess I've had the worst of it.
> >
> > With my last clean install I even killed my ability to run R from
> terminal
> >
> > R version 2.12.0 (2010-10-15)
> > Copyright (C) 2010 The R Foundation for Statistical Computing
> > ISBN 3-900051-07-0
> > Platform: i386-apple-darwin9.8.0/i386 (32-bit)
> >
> >
> > R is free software and comes with ABSOLUTELY NO WARRANTY.
> > You are welcome to redistribute it under certain conditions.
> > Type 'license()' or 'licence()' for distribution details.
> >
> > dyld: lazy symbol binding failed: Symbol not found: _iconv_open
> > Referenced from: /Library/Frameworks/R.
> > framework/Resources/lib/i386/libR.dylib
> > Expected in: /sw/lib/libiconv.2.dylib
> >
> > dyld: Symbol not found: _iconv_open
> > Referenced from:
> > /Library/Frameworks/R.framework/Resources/lib/i386/libR.dylib
> > Expected in: /sw/lib/libiconv.2.dylib
> >
>
>
> /sw/... is a Fink thing.
> Somewhere in your .profile Fink "things" are being set.
> When you open a terminal and do "set" what do you get?
> What does echo $PATH show?
> etc.,...
>
>
> I did an otool -L on
> /Library/Frameworks/R.framework/Versions/2.12/Resources/lib/libR.dylib l and
> got this
>
> libR.dylib:
>
> /Library/Frameworks/R.framework/Versions/2.12/Resources/lib/libR.dylib
> (compatibility version 2.12.0, current version 2.12.0)
>
> /Library/Frameworks/R.framework/Versions/2.12/Resources/lib/libRblas.dylib
> (compatibility version 0.0.0, current version 0.0.0)
>
>
> /Library/Frameworks/R.framework/Versions/2.12/Resources/lib/libgfortran.2.dylib
> (compatibility version 3.0.0, current version 3.0.0)
>
> /System/Library/Frameworks/CoreFoundation.framework/Versions/A/CoreFoundation
> (compatibility version 150.0.0, current version 476.19.0)
>
>
> /Library/Frameworks/R.framework/Versions/2.12/Resources/lib/libreadline.5.2.dylib
> (compatibility version 5.0.0, current version 5.2.0)
> /usr/lib/libz.1.dylib (compatibility version 1.0.0, current version
> 1.2.3)
> /usr/lib/libicucore.A.dylib (compatibility version 1.0.0, current
> version 36.0.0)
> /usr/lib/libSystem.B.dylib (compatibility version 1.0.0, current
> version 111.1.5)
> /usr/lib/libiconv.2.dylib (compatibility version 7.0.0, current
> version 7.0.0)
> /usr/lib/libgcc_s.1.dylib (compatibility version 1.0.0, current
> version 1.0.0)
>
>
> Berend
[[alternative HTML version deleted]]
_______________________________________________
R-SIG-Mac mailing list
R-SIG-Mac@stat.math.ethz.ch
https://stat.ethz.ch/mailman/listinfo/r-sig-mac
