The tree file is not proper formatted, it is missing a ; in the end. Regards, Klaus
On Sun, Apr 20, 2014 at 10:17 PM, Alexey Fomin <[email protected]> wrote: > Hi! > > Whether someone work with "ape" package? > I have long tree (see attached, it is in newick format, it is ultra > metric, it is from http://www.onezoom.org/user/tetrapods_tree.js ). > I need dates of nodes. > Someone advised me to do: > > 1) library(ape) > 2) tree<-read.tree(?yourtree.nex?) > 3) br.times<-branching.times(tree) > > But I can not not do the second step. > > I tried (after library(ape)) > tree<-read.tree(F:\tetrapods_tree.txt) > But it is gives: > Error: unexpected input in "tree<-read.tree(F:\" > > What can I do? > > Alexey. > > _______________________________________________ > R-sig-phylo mailing list - [email protected] > https://stat.ethz.ch/mailman/listinfo/r-sig-phylo > Searchable archive at > http://www.mail-archive.com/[email protected]/ > -- Klaus Schliep [[alternative HTML version deleted]] _______________________________________________ R-sig-phylo mailing list - [email protected] https://stat.ethz.ch/mailman/listinfo/r-sig-phylo Searchable archive at http://www.mail-archive.com/[email protected]/
