Greg,
I also tried boost 1.49.0, and met same problem. If necessary, I can try
1.51.
Yingfeng
On Mon, Jul 15, 2013 at 5:02 AM, Greg Landrum <[email protected]>wrote:
> Hi Yingfeng,
>
> I have not yet built the RDKit with boost 1.54.0. This makes it hard for
> me to know if the problem is the new version of boost, centos, or something
> with your configuration.
>
> Any chance that you can go back to an older version of boost like 1.51?
>
> -greg
>
>
> On Sunday, July 14, 2013, Yingfeng Wang wrote:
>
>> I failed to install RDKit on CentOS.
>>
>> The error message is
>>
>> [ 85%] Built target MolChemicalFeatures
>> Linking CXX executable testSLNParse
>> [ 85%] Built target rdSLNParse
>> /home/yingfeng/software/boost/boost_1_54_0/stage/lib/libboost_regex.so:
>> undefined reference to
>> `std::__detail::_List_node_base::_M_unhook()@GLIBCXX_3.4.15'
>> /home/yingfeng/software/boost/boost_1_54_0/stage/lib/libboost_regex.so:
>> undefined reference to
>> `std::overflow_error::~overflow_error()@GLIBCXX_3.4.15'
>> /home/yingfeng/software/boost/boost_1_54_0/stage/lib/libboost_regex.so:
>> undefined reference to
>> `std::__detail::_List_node_base::_M_hook(std::__detail::_List_node_base*)@GLIBCXX_3.4.15'
>> /home/yingfeng/software/boost/boost_1_54_0/stage/lib/libboost_regex.so:
>> undefined reference to `std::ctype<char>::_M_widen_init()
>> const@GLIBCXX_3.4.11'
>> /home/yingfeng/software/boost/boost_1_54_0/stage/lib/libboost_regex.so:
>> undefined reference to
>> `std::invalid_argument::~invalid_argument()@GLIBCXX_3.4.15'
>> /home/yingfeng/software/boost/boost_1_54_0/stage/lib/libboost_regex.so:
>> undefined reference to
>> `std::__detail::_List_node_base::_M_transfer(std::__detail::_List_node_base*,
>> std::__detail::_List_node_base*)@GLIBCXX_3.4.15'
>> collect2: ld returned 1 exit status
>> make[2]: *** [Code/GraphMol/SLNParse/testSLNParse] Error 1
>> make[1]: *** [Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/all]
>> Error 2
>>
>> I tried
>> cmake -D BOOST_ROOT=/home/yingfeng/software/boost/boost_1_54_0 ..
>> cmake -D BOOST_ROOT=/home/yingfeng/software/boost/boost_1_54_0 -D
>> Boost_USE_STATIC_LIBS=OFF ..
>> cmake -D BOOST_ROOT=/home/yingfeng/software/boost/boost_1_54_0 -D
>> Boost_USE_STATIC_LIBS=OFF -D Boost_NO_SYSTEM_PATHS=ON ..
>>
>> Thanks.
>>
>> Yingfeng
>>
>>
>>
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