Hi Greg,
I just tried 1.51, and got same problem.
Thanks.
Yingfeng
On Mon, Jul 15, 2013 at 7:49 AM, Yingfeng Wang <[email protected]> wrote:
> Greg,
>
> I also tried boost 1.49.0, and met same problem. If necessary, I can try
> 1.51.
>
> Yingfeng
>
>
> On Mon, Jul 15, 2013 at 5:02 AM, Greg Landrum <[email protected]>wrote:
>
>> Hi Yingfeng,
>>
>> I have not yet built the RDKit with boost 1.54.0. This makes it hard for
>> me to know if the problem is the new version of boost, centos, or something
>> with your configuration.
>>
>> Any chance that you can go back to an older version of boost like 1.51?
>>
>> -greg
>>
>>
>> On Sunday, July 14, 2013, Yingfeng Wang wrote:
>>
>>> I failed to install RDKit on CentOS.
>>>
>>> The error message is
>>>
>>> [ 85%] Built target MolChemicalFeatures
>>> Linking CXX executable testSLNParse
>>> [ 85%] Built target rdSLNParse
>>> /home/yingfeng/software/boost/boost_1_54_0/stage/lib/libboost_regex.so:
>>> undefined reference to
>>> `std::__detail::_List_node_base::_M_unhook()@GLIBCXX_3.4.15'
>>> /home/yingfeng/software/boost/boost_1_54_0/stage/lib/libboost_regex.so:
>>> undefined reference to
>>> `std::overflow_error::~overflow_error()@GLIBCXX_3.4.15'
>>> /home/yingfeng/software/boost/boost_1_54_0/stage/lib/libboost_regex.so:
>>> undefined reference to
>>> `std::__detail::_List_node_base::_M_hook(std::__detail::_List_node_base*)@GLIBCXX_3.4.15'
>>> /home/yingfeng/software/boost/boost_1_54_0/stage/lib/libboost_regex.so:
>>> undefined reference to `std::ctype<char>::_M_widen_init()
>>> const@GLIBCXX_3.4.11'
>>> /home/yingfeng/software/boost/boost_1_54_0/stage/lib/libboost_regex.so:
>>> undefined reference to
>>> `std::invalid_argument::~invalid_argument()@GLIBCXX_3.4.15'
>>> /home/yingfeng/software/boost/boost_1_54_0/stage/lib/libboost_regex.so:
>>> undefined reference to
>>> `std::__detail::_List_node_base::_M_transfer(std::__detail::_List_node_base*,
>>> std::__detail::_List_node_base*)@GLIBCXX_3.4.15'
>>> collect2: ld returned 1 exit status
>>> make[2]: *** [Code/GraphMol/SLNParse/testSLNParse] Error 1
>>> make[1]: *** [Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/all]
>>> Error 2
>>>
>>> I tried
>>> cmake -D BOOST_ROOT=/home/yingfeng/software/boost/boost_1_54_0 ..
>>> cmake -D BOOST_ROOT=/home/yingfeng/software/boost/boost_1_54_0 -D
>>> Boost_USE_STATIC_LIBS=OFF ..
>>> cmake -D BOOST_ROOT=/home/yingfeng/software/boost/boost_1_54_0 -D
>>> Boost_USE_STATIC_LIBS=OFF -D Boost_NO_SYSTEM_PATHS=ON ..
>>>
>>> Thanks.
>>>
>>> Yingfeng
>>>
>>>
>>>
>
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