Hi Greg,
So I took a development copy from sourceforge, but I am now unable to
compile the C++ code. Is anyone else having this issue?
Linking CXX executable graphmolIterTest
libSmilesParse.so.1.2013.06.1pre: undefined reference to `yysmarts_debug'
Thanks in advance!
Matt
On Sat, May 24, 2014 at 12:34 PM, Matthew Lardy <[email protected]> wrote:
> Thanks Greg! Yep, I built the wrappers with Swig myself. I'll update on
> Tuesday and give it a whirl.
>
> I noticed on another thread that someone needed the incantation to build
> the jar file in CentOS. I'll also pull back my conditions and post them
> there.
>
> Thanks again!
> Matt
>
>
> On Fri, May 23, 2014 at 9:17 PM, Greg Landrum <[email protected]>
> wrote:
>
>> Hi Matt,
>>
>>
>> On Fri, May 23, 2014 at 6:01 PM, Matthew Lardy <[email protected]> wrote:
>>
>>> Hi all,
>>>
>>> I am loving the Swig based wrappers for RDKit,
>>>
>>
>> Great to hear!
>>
>>
>>> but I keep running across one issue. Memory use. Using the
>>> SDMolSupplier I typically eat 2-3GBs of memory to process 10-20K molecules.
>>>
>>
>> Less great to hear. ;-)
>>
>>
>>> Is anyone else having this issue and, if so, has anyone solved it?
>>>
>>
>> I just set up a quick test, confirmed the problem, and fixed it.
>> The fix is checked in, are you using a self-built version of the wrappers?
>>
>> -greg
>>
>>
>>
>
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