The code distribution on source forge hasn't been updated in over a year.
Please use github instead
On Thursday, May 29, 2014, Matthew Lardy <[email protected]> wrote:
> Hi Greg,
>
> So I took a development copy from sourceforge, but I am now unable to
> compile the C++ code. Is anyone else having this issue?
>
> Linking CXX executable graphmolIterTest
> libSmilesParse.so.1.2013.06.1pre: undefined reference to `yysmarts_debug'
>
> Thanks in advance!
> Matt
>
>
> On Sat, May 24, 2014 at 12:34 PM, Matthew Lardy
> <[email protected]<javascript:_e(%7B%7D,'cvml','[email protected]');>
> > wrote:
>
>> Thanks Greg! Yep, I built the wrappers with Swig myself. I'll update on
>> Tuesday and give it a whirl.
>>
>> I noticed on another thread that someone needed the incantation to build
>> the jar file in CentOS. I'll also pull back my conditions and post them
>> there.
>>
>> Thanks again!
>> Matt
>>
>>
>> On Fri, May 23, 2014 at 9:17 PM, Greg Landrum
>> <[email protected]<javascript:_e(%7B%7D,'cvml','[email protected]');>
>> > wrote:
>>
>>> Hi Matt,
>>>
>>>
>>> On Fri, May 23, 2014 at 6:01 PM, Matthew Lardy
>>> <[email protected]<javascript:_e(%7B%7D,'cvml','[email protected]');>
>>> > wrote:
>>>
>>>> Hi all,
>>>>
>>>> I am loving the Swig based wrappers for RDKit,
>>>>
>>>
>>> Great to hear!
>>>
>>>
>>>> but I keep running across one issue. Memory use. Using the
>>>> SDMolSupplier I typically eat 2-3GBs of memory to process 10-20K molecules.
>>>>
>>>
>>> Less great to hear. ;-)
>>>
>>>
>>>> Is anyone else having this issue and, if so, has anyone solved it?
>>>>
>>>
>>> I just set up a quick test, confirmed the problem, and fixed it.
>>> The fix is checked in, are you using a self-built version of the
>>> wrappers?
>>>
>>> -greg
>>>
>>>
>>>
>>
>
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