Hi, You'll need to update using:
$ svn up then install as root/administrator by typing (assuming python is installed as root): $ python setup.py install in the minfx base directory. Then the crash shouldn't happen. If it does still have problems, it would be worth reporting it to the minfx mailing lists (https://gna.org/mail/?group=minfx). A bug report for minfx can be submitted at https://gna.org/bugs/?func=additem&group=minfx. As for this taking a long time to optimise, that is because of the convoluted, very tight optimisation space. You can decrease the max_iter value from 1e7 in the minimise() user function at the start to to maybe 1e5, but this should not be done at the end of the analysis. I would say though that all these problems will go away with a better error analysis in the R2 curve-fitting. Regards, Edward On Mon, Oct 27, 2008 at 12:48 AM, Tyler Reddy <[EMAIL PROTECTED]> wrote: > I used subversion to update minfx, but I'm still having the problem (unless I > need to delete the old minfx, or does the nested update automatically 'take > over' in this case?). > > The calculation certainly goes a lot longer now than it did before, but > at k=312 > it crashes out with the same traceback. Another possibility is that I have to > delete all the local_tm and sphere folders and just start from scratch > with the > new minfx, though I'm not sure that makes sense. > > Tyler > > > Quoting Edward d'Auvergne <[EMAIL PROTECTED]>: > >> Right, I've fixed the bug in the minfx repository. It will take me a >> while to release minfx 1.0.2 but using subversion you can get the >> changes immediately. Note that as this space is so warped, >> optimisation of this model will take a long, long time! >> >> Regards, >> >> Edward >> >> >> On Fri, Oct 24, 2008 at 10:40 PM, Edward d Auvergne >> <[EMAIL PROTECTED]> wrote: >>> >>> Update of bug #12499 (project relax): >>> >>> Status: Confirmed => Fixed >>> Open/Closed: Open => Closed >>> >>> _______________________________________________________ >>> >>> Follow-up Comment #5: >>> >>> This problem has been fixed in the minfx project >>> (https://gna.org/projects/minfx/), in the bug report >>> https://gna.org/bugs/?12501. >>> >>> _______________________________________________________ >>> >>> Reply to this item at: >>> >>> <http://gna.org/bugs/?12499> >>> >>> _______________________________________________ >>> Message sent via/by Gna! >>> http://gna.org/ >>> >>> >> > > > > > _______________________________________________ > relax (http://nmr-relax.com) > > This is the relax-devel mailing list > [email protected] > > To unsubscribe from this list, get a password > reminder, or change your subscription options, > visit the list information page at > https://mail.gna.org/listinfo/relax-devel > _______________________________________________ relax (http://nmr-relax.com) This is the relax-devel mailing list [email protected] To unsubscribe from this list, get a password reminder, or change your subscription options, visit the list information page at https://mail.gna.org/listinfo/relax-devel
