Hi,

Ok, I'll have a look at this, probably after fixing up how relax
handles different molecules verses different conformations of the same
molecule (molecules verses models).  I might have to create a special
branch for this code too, as it will break many things while under
development.

Regards,

Edward


On Tue, Dec 23, 2008 at 5:16 PM, Sébastien Morin
<[email protected]> wrote:
> Hi Ed,
>
> I tried to have a look at the code to try to implement what we discussed
> concerning the generic format... However, I'm a bit confused and would
> prefer to let you do it...
>
> Is that right for you ?
>
> Thanks for proposing me to implement this, but I'm still not an expert
> in python and algorithmics and this seems a bit too much for me right now...
>
> Enjoy the Christmas Holidays !
>
> Regards,
>
>
> Sébastien  :)
>
>
>
>
> Edward d'Auvergne wrote:
>> On Fri, Dec 5, 2008 at 8:19 PM, Sébastien Morin
>> <[email protected]> wrote:
>>
>>> Hi Edward,
>>>
>>> I agree with you. I had not think about all the other files in relax
>>> since I was so focused on the 'generic' file... but your idea of
>>> implementing this at a higher level is quite logical and would give much
>>> more flexibility to relax. Maybe we could create a branch for this, as
>>> you proposed...
>>>
>>> Concerning the generic format, what do you think we should do ? Should
>>> we just introduce variables so the user tells relax in which column
>>> things are..? The user could also tell that he uses the generic format,
>>> as well as how many header lines there are, etc... In fact, the user
>>> could, for now (until we get the automatic recognition stuff working),
>>> tell everything concerning the formatting of his file... What do you think ?
>>>
>>
>> I think it would be best to do what all the other code does for now
>> and require the user to specify all columns manually.  That could be
>> the test for the generic format for now, that some of the columns have
>> been specified, so that we can still automatically determine the file
>> format.  This automatic format determination is specific to the
>> generic_fns.spectrum code and not that special data object I
>> previously talked about.  In the future, the test could be to pass the
>> file into this data object as a last resort if no other format is
>> found, and if a RelaxError occurs, catch it and throw a different
>> RelaxError stating that the automatic file format determination
>> failed.
>>
>>
>>
>>> Lots of work ahead !
>>>
>>
>> Like I said, this is not a simple task ;)
>>
>> Regards,
>>
>> Edward
>>
>>
>
>

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