Hi, It could be, that Python 2.6 dynamically linked libraries are now compiled differently to earlier Python versions. I'll have to look that up as well. Would you know the linker options now required?
Cheers, Edward 2009/8/17 Jack Howarth <[email protected]>: > Edward, > I think I see the problem. The link line is missing a linkage on either > /sw/lib/python2.6/config/libpython2.6.a or > /sw/lib/python2.6/config/libpython2.6,dylib. > What do you have for the linkage of maths_fns/relax_fit.so on linux? Does > that build explicitly link in the python library? > Jack > > > On Mon, Aug 17, 2009 at 11:50:10AM +0200, Edward d'Auvergne wrote: >> Hi, >> >> Thank you for building these packages (or at least attempting for now >> ;). I'm still looking into the problem, but it's looking like the >> Python header files are missing or are from an old version. Do you >> know if this could be the issue, that the Python development packages >> are out of date or are missing? >> >> Cheers, >> >> Edward >> >> >> >> On Sun, Aug 16, 2009 at 4:08 AM, Jack Howarth<[email protected]> >> wrote: >> > Edward, >> > I am trying to build updated relax-py packaging >> > for fink using the 1.3.4 release on x86_64 fink >> > with python2.6. Although your web page indicates >> > that the binaries available are built against >> > python 2.5 and 2.6, I am seeing build failures >> > when I try here with scons 1.2.0... >> > >> > /sw/bin/python2.6 /sw/bin/scons >> > scons: Reading SConscript files ... >> > scons: done reading SConscript files. >> > scons: Building targets ... >> > >> > >> > >> > >> > ########################### >> > # Compiling the C modules # >> > ########################### >> > >> > >> > Building the relaxation curve fitting module 'maths_fns/relax_fit.so' >> > >> > gcc -o maths_fns/c_chi2.os -c -I/sw/include/python2.6 >> > -I/sw/lib/python2.6/site-packages/numpy/core/include -fPIC >> > maths_fns/c_chi2.c >> > gcc -o maths_fns/exponential.os -c -I/sw/include/python2.6 >> > -I/sw/lib/python2.6/site-packages/numpy/core/include -fPIC >> > maths_fns/exponential.c >> > gcc -o maths_fns/relax_fit.os -c -I/sw/include/python2.6 >> > -I/sw/lib/python2.6/site-packages/numpy/core/include -fPIC >> > maths_fns/relax_fit.c >> > gcc -o maths_fns/relax_fit.so -bundle -bundle_loader /sw/bin/python2.6 >> > -dynamic maths_fns/c_chi2.os maths_fns/exponential.os >> > maths_fns/relax_fit.os >> > Undefined symbols: >> > "_PyArg_ParseTupleAndKeywords", referenced from: >> > _setup in relax_fit.os >> > "_PyErr_Print", referenced from: >> > _initrelax_fit in relax_fit.os >> > "_Py_InitModule4_64", referenced from: >> > _initrelax_fit in relax_fit.os >> > "_PyArg_ParseTuple", referenced from: >> > _func in relax_fit.os >> > _dfunc in relax_fit.os >> > "_PyExc_RuntimeError", referenced from: >> > __import_array in exponential.os >> > __import_array in exponential.os >> > __import_array in exponential.os >> > __import_array in relax_fit.os >> > __import_array in relax_fit.os >> > __import_array in relax_fit.os >> > "_PyList_New", referenced from: >> > _back_calc_I in relax_fit.os >> > "__Py_NoneStruct", referenced from: >> > _setup in relax_fit.os >> > _setup in relax_fit.os >> > _setup in relax_fit.os >> > "_PyExc_ImportError", referenced from: >> > _initrelax_fit in relax_fit.os >> > "_PyCObject_AsVoidPtr", referenced from: >> > __import_array in exponential.os >> > __import_array in relax_fit.os >> > "_PyCObject_Type", referenced from: >> > __import_array in exponential.os >> > __import_array in relax_fit.os >> > "_PyImport_ImportModule", referenced from: >> > __import_array in exponential.os >> > __import_array in relax_fit.os >> > "_PyErr_SetString", referenced from: >> > _initrelax_fit in relax_fit.os >> > "_PyErr_Format", referenced from: >> > __import_array in exponential.os >> > __import_array in exponential.os >> > __import_array in exponential.os >> > __import_array in relax_fit.os >> > __import_array in relax_fit.os >> > __import_array in relax_fit.os >> > "_PyList_SetItem", referenced from: >> > _back_calc_I in relax_fit.os >> > "_PyObject_GetAttrString", referenced from: >> > __import_array in exponential.os >> > __import_array in relax_fit.os >> > "_Py_BuildValue", referenced from: >> > _func in relax_fit.os >> > _d2func in relax_fit.os >> > _back_calc_I in relax_fit.os >> > ld: symbol(s) not found >> > >> > Is the 1.3.4 release really python2.6 compatible or do I need additional >> > patches? Thanks in advance for any information. >> > Jack >> > ps I am updating the minfx-py package to the newer 1.0.2 release of >> > course for the python 2.6 compatibility changes. >> > >> > _______________________________________________ >> > relax (http://nmr-relax.com) >> > >> > This is the relax-users mailing list >> > [email protected] >> > >> > To unsubscribe from this list, get a password >> > reminder, or change your subscription options, >> > visit the list information page at >> > https://mail.gna.org/listinfo/relax-users >> > > _______________________________________________ relax (http://nmr-relax.com) This is the relax-users mailing list [email protected] To unsubscribe from this list, get a password reminder, or change your subscription options, visit the list information page at https://mail.gna.org/listinfo/relax-users
