Hi, please find the bug report #19606 at https://gna.org/bugs/index.php?19606
Cheers Martin On 29.03.2012, at 18:10, Edward d'Auvergne wrote: > Hi, > > Unfortunately not yet - I'm still trying to work out how I can > reproduce this problem! On my system, also 10.6.8, the relax DMG file > execution is working fine. So I have to work out what is breaking it. > Development on the Mac is difficult though, and it takes much longer > than on other systems. Are you using the DMG distribution file as > well? Could you give more information (copy and paste messages, etc.) > about the problem? The more information I have, the easier it will be > for me to find the exact point of failure and fix it. Also, what is > your system architecture? It should be one of ppc, ppc64, i386, or > x86_64. If you or Martin could create a bug report with all > information possible, this would also be of great help (see > https://gna.org/bugs/?func=additem&group=relax). > > Cheers, > > Edward > > > On 29 March 2012 18:02, Andrew Olson <[email protected]> wrote: >> Was the MacOSX relax error ever solved? I am running MacOS 10.6.8 and am >> getting the same error. >> >> ________________________________ >> From: Edward d'Auvergne <[email protected]> >> To: Martin Ballaschk <[email protected]> >> Cc: [email protected] >> Sent: Friday, March 23, 2012 10:11 AM >> Subject: Re: Temperature calibration & relax @ Mac OS X 10.7.3 „Lion“ >> >> Hi, >> >> Sorry, I forgot to mention how you perform the temperature >> calibration. It is mentioned at the end of one of the links I sent, >> though it is quite buried. You essentially run one of the experiments >> but scaled down to say ~20-30 min (just decrease the number of scans >> or transients). This should be enough time for the system to be fully >> stabilised, temperature wise. You have your MeOH in the spectrometer >> during this and then, at the very end of the experiment, run a 90 >> proton pulse (I'm not sure how you do that on Bruker, but on Varian >> you can queue the 2 experiments to run directly one after the other) >> and then measure the H signal. You might also be able to play with >> your phase cycling so that the MeOH signal is not cancelled but rather >> added during the R2 and R1 experiments, and then you should have a row >> of MeOH signal in your 2D. >> >> Regards, >> >> Edward >> >> >> On 23 March 2012 11:09, Martin Ballaschk <[email protected]> wrote: >>> Dear relax-users, >>> >>> I am just beginning to record and analyze relaxation data for MF analysis. >>> So far we collected data at 600 MHz, and a second data set at 750MHz is >>> planned. >>> >>> I have two questions I hope you can help me with: >>> >>> 1) Temperature calibration >>> >>> We use single-scan interleaving to account for a constant temperature >>> during the whole experimental series. We also use methanol to calibrate the >>> spectrometer's temperature sensors. As we found out, every magnet is >>> different and the on-screen parameters cannot be trusted. We have tables >>> where This procedure is not done with the T2 measurements in mind, however. >>> >>> Isn't it also important that R1 and R2 measurements have the same >>> temperature – how do you check for that? >>> >>> How can I check differences in sample heating between different magnets >>> due to different air-flow etc? How to compensate for these temperature >>> differences? Do I need different pulse programs that account for temperature >>> differences for every spectrometer? Or is the difference insignificant once >>> the spectrometers have been calibrated? >>> >>> >>> 2) >>> In Mac OS X ("Lion", 10.7.3), the self-contained relax Application bundle >>> is crashing and is giving just an "relax error" and the option to >>> "terminate" or "open the Console". >>> >>> I can run the “relax” script which is sitting inside >>> relax.app/Contents/Resources/ and I get a prompt, but only after installing >>> numpy via Macports. If I don't, relax complains that numpy is not installed. >>> >>> After installing wxPython 2.9 via the official installer "./relax" -g is >>> attempting to start (I can see the splash screen), but then halts with the >>> errors. >>> >>> Interestingly, I found out today that it seems to run just fine if I run >>> the relax binary in Contents/MacOS by dropping it onto Terminal.app! >>> (I did not test this without numpy and wXPython seperately installed.) >>> >>> What's your experience? What do you think is broken – my system (10.7) or >>> something inside the application bundle? >>> >>> >>> >>> Cheers >>> Martin >>> >>> *** >>> >>> RELAX ERROR MESSAGES FROM THE CONSOLE >>> >>> 15.03.12 15:19:15,538 relax: relax Error >>> 15.03.12 15:19:17,667 com.apple.launchd.peruser.501: >>> ([0x0-0x14e14e].com.nmr-relax.relax[70595]) Exited with code: 255 >>> 15.03.12 15:19:22,227 [0x0-0x14f14f].com.nmr-relax.relax: <_FuncPtr object >>> at >>> 0x101b0dc80> >>> 15.03.12 15:19:22,227 [0x0-0x14f14f].com.nmr-relax.relax: Traceback (most >>> recent call last): >>> 15.03.12 15:19:22,227 [0x0-0x14f14f].com.nmr-relax.relax: File >>> "/Applications/relax.app/Contents/Resources/__boot__.py", line 179, in >>> <module> >>> 15.03.12 15:19:22,227 [0x0-0x14f14f].com.nmr-relax.relax: >>> _argv_emulation() >>> 15.03.12 15:19:22,227 [0x0-0x14f14f].com.nmr-relax.relax: File >>> "/Applications/relax.app/Contents/Resources/__boot__.py", line 177, in >>> _argv_emulation >>> 15.03.12 15:19:22,227 [0x0-0x14f14f].com.nmr-relax.relax: >>> _get_argvemulator().mainloop() >>> 15.03.12 15:19:22,227 [0x0-0x14f14f].com.nmr-relax.relax: File >>> "/Applications/relax.app/Contents/Resources/__boot__.py", line 101, in >>> mainloop >>> 15.03.12 15:19:22,227 [0x0-0x14f14f].com.nmr-relax.relax: stoptime = >>> Evt.TickCount() + timeout >>> 15.03.12 15:19:22,227 [0x0-0x14f14f].com.nmr-relax.relax: AttributeError: >>> 'module' object has no attribute 'TickCount' >>> >>> -- >>> Martin Ballaschk >>> AG Schmieder >>> Leibniz-Institut für Molekulare Pharmakologie >>> Robert-Rössle-Str. 10 >>> 13125 Berlin >>> [email protected] >>> Tel.: +49-30-94793-234/315 >>> Büro: A 1.26 >>> Labor: C 1.10 >>> >>> >>> _______________________________________________ >>> relax (http://nmr-relax.com) >>> >>> This is the relax-users mailing list >>> [email protected] >>> >>> To unsubscribe from this list, get a password >>> reminder, or change your subscription options, >>> visit the list information page at >>> https://mail.gna.org/listinfo/relax-users >> >> _______________________________________________ >> relax (http://nmr-relax.com) >> >> This is the relax-users mailing list >> [email protected] >> >> To unsubscribe from this list, get a password >> reminder, or change your subscription options, >> visit the list information page at >> https://mail.gna.org/listinfo/relax-users >> >> >> >> _______________________________________________ >> relax (http://nmr-relax.com) >> >> This is the relax-users mailing list >> [email protected] >> >> To unsubscribe from this list, get a password >> reminder, or change your subscription options, >> visit the list information page at >> https://mail.gna.org/listinfo/relax-users >> -- Martin Ballaschk AG Schmieder Leibniz-Institut für Molekulare Pharmakologie Robert-Rössle-Str. 10 13125 Berlin [email protected] Tel.: +49-30-94793-234/315 Büro: A 1.26 Labor: C 1.10 _______________________________________________ relax (http://nmr-relax.com) This is the relax-users mailing list [email protected] To unsubscribe from this list, get a password reminder, or change your subscription options, visit the list information page at https://mail.gna.org/listinfo/relax-users
