Hi >You seem to be trying with the same semi-broken Command Line Tools as >we discussed yesterday. >Could you please consider installing the latest XCode?
I have done this and my version of Xcode is Version 12.3 (12C33) and % xcode-select -v xcode-select version 2373. Now, compilation just fails at [setuptools_scm-4.1.2] Error installing package setuptools_scm-4.1.2 Pierre Le mercredi 16 décembre 2020 à 10:51:19 UTC+1, dim...@gmail.com a écrit : > On Wed, Dec 16, 2020 at 9:34 AM Pierre Vanhove <vanhove...@gmail.com> > wrote: > > > > Hi - so I've tried to recompile (after distclean etc. ) now I get > another compilation error > > > > Error installing package markupsafe-1.1.1 > > You seem to be trying with the same semi-broken Command Line Tools as > we discussed yesterday. > Could you please consider installing the latest XCode? > > these errors get weirder and weirder. > > Package 'markupsafe' is currently not installed > No legacy uninstaller found for 'markupsafe'; nothing to do > Installing markupsafe-1.1.1 > Error: Tried to use Sage's Python which was not yet installed. > If this was called from an spkg-install script for another > package you should add $(PYTHON) as a dependency in > build/pkgs/<pkg>/dependencies > Error: could not determine package name > > It says in effect that you need to add $(PYTHON) to > build/pkgs/markupsafe/dependencies > > - but it is already there as far as I can see. > > > > > > > > > Le mercredi 16 décembre 2020 à 10:01:26 UTC+1, dim...@gmail.com a écrit > : > >> > >> It is not usual that the 1st run went ok, but the next one crashed on > startup. > >> Could you try to move away ~/.sage/ and see if it helps? > >> (it tends to accumulate incompatible stuff and during updates cause > >> all sorts of issues) > >> > >> If it doesn't help: > >> > >> Could you provide the output of > >> > >> otool -L /Users/pierre/local/lib/libSingular-4.1.1.dylib > >> > >> On Wed, Dec 16, 2020 at 8:22 AM Pierre Vanhove <vanhove...@gmail.com> > wrote: > >> > > >> > Here is the crash report > >> > > >> > > >> > > >> > Le mercredi 16 décembre 2020 à 09:17:14 UTC+1, Pierre Vanhove a écrit > : > >> >> > >> >> Hi > >> >> > >> >> thanks for the tips. So I have recompiled sage successfully > >> >> > >> >> touch > "/Users/pierre/local/sage-9.3.beta4/local/var/lib/sage/installed/sagelib-9.3.beta4" > >> >> "/Users/pierre/local/sage-9.3.beta4/build/bin/sage-starts" > >> >> > >> >> Testing that Sage starts... > >> >> [2020-12-16 01:46:39] SageMath version 9.3.beta4, Release Date: > 2020-12-14 > >> >> This looks like the first time you are running Sage. > >> >> Cleaning up, do not interrupt this. > >> >> Done cleaning. > >> >> Yes, Sage starts. > >> >> > >> >> In a terminal window, I started sage. Did 1+1 test. I quit sage, and > launch it again, and sage crashes > >> >> > >> >> ImportError: > dlopen(/Users/pierre/local/lib/python3.9/site-packages/sage/matrix/ > matrix_mpolynomial_dense.cpython-39-darwin.so, 2): Library not loaded: > /Users/pierre/local/lib/libSingular-4.1.1.dylib > >> >> Referenced from: > /Users/pierre/local/lib/python3.9/site-packages/sage/matrix/ > matrix_mpolynomial_dense.cpython-39-darwin.so > >> >> Reason: image not found > >> >> > >> >> I'm sending a crash report. > >> >> > >> >> Pierre > >> >> > >> >> > >> >> Le mardi 15 décembre 2020 à 21:31:23 UTC+1, zsc...@gmail.com a > écrit : > >> >>> > >> >>> You can safely ignore that message. I think there is some ongoing > work being done on changing how sage handles recommended packages and that > message is a byproduct. If it's really bothering you then you can just type: > >> >>> > >> >>> make _recommended > >> >>> > >> >>> and I think that message should disappear. > >> >>> > >> >>> On Tuesday, December 15, 2020 at 3:24:12 PM UTC-5 > vanhove...@gmail.com wrote: > >> >>>> > >> >>>> hi > >> >>>> > >> >>>> I have cleanup my /usr/local - reinstalled a fresh brew and Xcode. > >> >>>> I have run ./configure in sage-9.3-beta4 that complained about > missing homebrew package. I have installed them. > >> >>>> % brew list > >> >>>> aom fribidi harfbuzz libheif little-cms2 pandoc srt > >> >>>> arb gcc icu4c libidn2 lzo pcre suite-sparse > >> >>>> bdw-gc gd igraph liblqr metis pcre2 tbb > >> >>>> boost gdbm ilmbase libmpc mpfi pixman tesseract > >> >>>> c-ares gettext imagemagick libogg mpfr pkg-config texinfo > >> >>>> cairo ghostscript isl libomp nauty ppl theora > >> >>>> cmake giflib jemalloc libpng nettle python@3.9 tox > >> >>>> coreutils glib jpeg libsamplerate nghttp2 r unbound > >> >>>> dav1d glpk lame libsndfile ninja rav1e webp > >> >>>> docbook gmp leptonica libsoxr ntl readline x264 > >> >>>> docbook-xsl gnu-getopt libass libtasn1 openblas rtmpdump x265 > >> >>>> ffmpeg gnutls libatomic_ops libtiff opencore-amr rubberband xmlto > >> >>>> flac gobject-introspection libbluray libtool openexr sdl2 xvid > >> >>>> flint gpatch libde265 libunistring openjpeg shared-mime-info xz > >> >>>> fontconfig graphite2 libev libvidstab openssl@1.1 snappy zeromq > >> >>>> freetype gsl libevent libvorbis opus speex > >> >>>> frei0r guile libffi libvpx p11-kit sqlite > >> >>>> > >> >>>> my homebrew setup is clean > >> >>>> > >> >>>> % brew doctor > >> >>>> Your system is ready to brew. > >> >>>> > >> >>>> then boostrapping, sourcing brew environnement and rerun configure > in sage, I still get the message > >> >>>> > >> >>>> $ brew install pandoc ffmpeg imagemagick texinfo > >> >>>> > >> >>>> > >> >>>> Pierre > >> >>>> > >> >>>> Le mardi 15 décembre 2020 à 19:57:40 UTC+1, zsc...@gmail.com a > écrit : > >> >>>>> > >> >>>>> Have you tried running "brew doctor"? Homebrew should complain > loudly about all of the header files in /usr/local/include which could > cause conflicts. For example, if I touch stdio.h in my /usr/local/include > and then I run brew doctor I get: > >> >>>>> > >> >>>>> "Warning: Unbrewed header files were found in /usr/local/include. > >> >>>>> If you didn't put them there on purpose they could cause problems > when > >> >>>>> building Homebrew formulae, and may need to be deleted. > >> >>>>> > >> >>>>> Unexpected header files: > >> >>>>> /usr/local/include/stdio.h" > >> >>>>> > >> >>>>> I would start with running brew doctor and trying to fix the > recommendations there. > >> >>>>> > >> >>>>> On Tuesday, December 15, 2020 at 8:43:28 AM UTC-5 > dim...@gmail.com wrote: > >> >>>>>> > >> >>>>>> On Tue, Dec 15, 2020 at 1:23 PM Pierre Vanhove < > vanhove...@gmail.com> wrote: > >> >>>>>> > > >> >>>>>> > hi > >> >>>>>> > > >> >>>>>> > > >> >>>>>> > What did one do yesterday just after 17:00 on the machine? > >> >>>>>> > Updated Homebrew? Installed macOS command line tools? > >> >>>>>> > > >> >>>>>> > > >> >>>>>> > yes I updated homebrew, but with a bad internet connection and > the connection broke. I had to redo it. > >> >>>>>> > > >> >>>>>> > But curiously, I have deleted the sage-9.2 folder downloaded a > sage-9.3-beta4 and then worked from the new folder. > >> >>>>>> > > >> >>>>>> > I will see if using the backup from my time machine solves the > problem by going back in time. > >> >>>>>> > >> >>>>>> I'd suggest to install the full XCode. The fact that homebrew > >> >>>>>> apparently created that link indicates > >> >>>>>> that not all is well; I'd also erase the whole /usr/local and > >> >>>>>> reinstall Homebrew from scratch, > >> >>>>>> after XCode is installed. > >> >>>>>> > >> >>>>>> macOS, Homebrew, XCode are moving targets, it's hard to keep up > with them. > >> >>>>>> > >> >>>>>> > > >> >>>>>> > Now that they have put sirocco on cocacl, I will work with > that. And I will leave most of the sage coding to Andrey Novoseltsev then > since locally I cannot work... > >> >>>>>> > > >> >>>>>> > best, Pierre > >> >>>>>> > > >> >>>>>> > ======================================================== > >> >>>>>> > Pierre Vanhove (vanhove...@gmail.com) | web: > http://sites.google.com/site/vanhovepierre/ > >> >>>>>> > > >> >>>>>> > > >> >>>>>> > > >> >>>>>> > > >> >>>>>> > > >> >>>>>> > > >> >>>>>> > -- > >> >>>>>> > You received this message because you are subscribed to the > Google Groups "sage-devel" group. > >> >>>>>> > To unsubscribe from this group and stop receiving emails from > it, send an email to sage-devel+...@googlegroups.com. > >> >>>>>> > To view this discussion on the web visit > https://groups.google.com/d/msgid/sage-devel/95B792F4-B444-4DBB-8E4B-2846A020C683%40gmail.com > . > >> > > >> > -- > >> > You received this message because you are subscribed to the Google > Groups "sage-devel" group. > >> > To unsubscribe from this group and stop receiving emails from it, > send an email to sage-devel+...@googlegroups.com. > >> > To view this discussion on the web visit > https://groups.google.com/d/msgid/sage-devel/f8466fc7-c21d-457e-8204-03c9ddc9fcd4n%40googlegroups.com > . > > > > -- > > You received this message because you are subscribed to the Google > Groups "sage-devel" group. > > To unsubscribe from this group and stop receiving emails from it, send > an email to sage-devel+...@googlegroups.com. > > To view this discussion on the web visit > https://groups.google.com/d/msgid/sage-devel/2286952c-9ffb-4f68-9b60-9487fd7275cbn%40googlegroups.com > . > -- You received this message because you are subscribed to the Google Groups "sage-devel" group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-devel+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/sage-devel/7381f769-dc73-46f0-9fbf-a57091267298n%40googlegroups.com.
