On Tue, Feb 25, 2025 at 12:03 PM [email protected]
<[email protected]> wrote:
>
> I agree that we should use as many homebrew packages as possible, but how can 
> we ensure that we follow the upgrades ?
> For instance the versions of openblas (0.3.29), gsl (2.8), numpy (2.2.3), 
> scipy (1.15.2) and pari (2.17.1) are newer on homebrew than what we accept.

Because the update of pari is stalled due to a bug reported?
A Pari expert should step up and tell whether it's an upstream bug, or not.
https://github.com/sagemath/sage/pull/38749

openblas (of any version less than 0.3.99) should be accepted,
provided it is recognised by pkg-config
(you'd need to run source .homebrew-build-env for the latter).
Same applies to gsl.

numpy and scipy are Python packages, you need

./configure --enable-system-site-packages

to have them from "outside".
There are no version constraints on them imposed.
I have a meanwhile bitrotten PR to upgrade numpy and scipy, and
despite requesting review from 5 people, only two responded.
https://github.com/sagemath/sage/pull/38846, back in Oct 2024.
Then reviewers just disappeared there...
Some of these updates are now in separate PRs. Some need to be done.

See, that's what I mean by "Sage has too many vendored packages".
These packages are bog-standard PyPI packages, we could have followed
the new versions if we didn't have this so beloved by some version
locks.

Dima





>
> I'm currently facing the following issue:
> ipykernel fails to compile and reports that it is unable to find 
> jupyter_core. But configure says:
> jupyter_core:                   using system package; SPKG will not be 
> installed
>
> I'm currently trying to compile from scratch with 
> --with-system-jupyter_core=no. We'll see if it's better.
>
> On Tuesday, February 25, 2025 at 6:16:24 PM UTC+1 John H Palmieri wrote:
>>
>> Maybe this is naive, but if you're testing a change from the old situation, 
>> where Python 3.13 was not allowed, to now allowing it, I might imagine that 
>> you would test it on standard supported platforms, like OS X with Python 
>> 3.13 installed via homebrew. We should back out the change until it's 
>> implemented correctly.
>>
>>
>> On Tuesday, February 25, 2025 at 6:46:41 AM UTC-8 Dima Pasechnik wrote:
>>>
>>>
>>>
>>> On 24 February 2025 23:52:36 GMT-06:00, John H Palmieri 
>>> <[email protected]> wrote:
>>> >Sage should work out of the box without "--enable-system-site-packages".
>>>
>>>
>>> The box has become so heavy that one needs a forklift to do anything with 
>>> it :-)
>>>
>>>
>>> > If
>>> >it doesn't, that's a bug in Sage. How about we don't allow Python 3.13 if
>>> >it's broken? Why wasn't this caught in testing?
>>>
>>> well, Sage with Python 3.13 works on Linux,
>>> and is default on some.
>>>
>>> It appears that there are dozens of macOS/apple toolchain/apple hardware 
>>> combos, and each of them has its very own set of bugs, misfeatures, 
>>> multiple dodgy Python installs, etc.
>>>
>>> We can't possibly test for all of them.
>>>
>>> And please don't force on Sage developers the need to dig up and reproduce 
>>> solutions by Homebrew, which has 10 times more developers and nontrivial 
>>> funding, solutions which are already there.
>>>
>>> What's wrong with using the flag above, if it works?
>>>
>>> I hope William S. forgives me if I quote his up to date opinion on Macs:
>>>
>>> -----
>>> For me, Macs are reasonable as basically "Chromebooks" that can also
>>> run Linux VM's pretty well and keep track of photos and video. Beyond
>>> that it's extremely painful, and I vastly prefer Linux for all things
>>> dev/server/remote.
>>> -----
>>>
>>> My opinion is similar - except that the only use of Mac I have is to cause 
>>> myself extreme pain by trying to fix never ending macOS - specific
>>> issues.
>>>
>>> On macOS, either we embrace Homebrew and use it to get external 
>>> dependencies, or we use Conda. Current "build everything from ground up" 
>>> has become next to impossible in any reliable way.
>>>
>>>
>>> Dima
>>>
>>>
>>> >
>>> >
>>> >On Monday, February 24, 2025 at 7:34:13 PM UTC-8 Dima Pasechnik wrote:
>>> >
>>> >> On Mon, Feb 24, 2025 at 5:44 PM John H Palmieri <[email protected]>
>>> >> wrote:
>>> >> >
>>> >> > On OS X 15.3.1 with many homebrew packages installed, including both
>>> >> Python 3.12 and Python 3.13:
>>> >> >
>>> >> > - if I use Python 3.13, `pillow` and `cffi` fail to build. (I used
>>> >> "./configure", and I also tried after applying the patch from #39570)
>>> >>
>>> >> how about using installing pillow and cffi in Homebrew, and doing
>>> >>
>>> >> ./configure --enable-system-site-packages
>>> >>
>>> >> This should pick them from Homebrew. (If it doesn't it's a Sage bug I
>>> >> suppose)
>>> >>
>>> >> Frankly speaking I am less than excited to try to figure out what goes
>>> >> wrong in sdh_pip_install
>>> >> in this case. Homebrew can do it...
>>> >>
>>> >> > - if I use Python 3.12, then `pillow` and `cffi` and indeed everything
>>> >> builds successfully. (I used "./configure --with-python=`which 
>>> >> python3.12`")
>>> >> >
>>> >> >
>>> >> > On Friday, February 21, 2025 at 3:40:17 PM UTC-8 Volker Braun wrote:
>>> >> >>
>>> >> >> As always, you can get the latest beta version from the "develop" git
>>> >> branch. Alternatively, the self-contained source tarball is at
>>> >> http://www.sagemath.org/download-latest.html
>>> >> >>
>>> >> >>
>>> >> >> 9cd86e9596a (tag: 10.6.beta7, github/develop) Updated SageMath version
>>> >> to 10.6.beta7
>>> >> >> c2766d1f625 gh-39541: Remove dead mailing lists.
>>> >> >> 54951498178 gh-39536: Fix a nonfunctional long time doctest tag
>>> >> >> 5289298248a gh-39533: build/pkgs: update eclib to version 20250122
>>> >> >> 7420a272382 gh-39530: Improvement to flint_autogen reader
>>> >> >> cee1e2b52f9 gh-39527: Test on CI that update-meson is properly ran
>>> >> >> a007379b910 gh-39523: multi polynomial element/repr
>>> >> >> 850493472d5 gh-39521: rename also set-like species
>>> >> >> bd626efc02f gh-39518: line_graph for multigraphs
>>> >> >> 72c6188116a gh-39513: Show test failures of ci-meson as annotations
>>> >> >> 4f4c1203415 gh-39510: add of the function rank_support_of_vector
>>> >> >> 2af3de6fa6e gh-39509: Add a doctest for
>>> >> HomsetsCategory._make_named_class_key
>>> >> >> d8b7cdfcecb gh-39508: Fix some typo
>>> >> >> b567299fbbb gh-39506: New algorithm for cuts of a Poset
>>> >> >> 88672d71a29 gh-39505: Improve handling of strings supplied as matrix
>>> >> entries
>>> >> >> 935232df552 gh-39504: Implement im_gens in the class 
>>> >> >> fraction_field_FpT
>>> >> >> a01815fda00 gh-39499: Improve sage_getfile by looking at __init__
>>> >> >> b7da8f23c43 gh-39498: Apply sort and filter of walk_packages
>>> >> consistently
>>> >> >> 3500f616037 gh-39497: moving random_element to category of rings
>>> >> >> e368fa71812 gh-39496: Add deformation cones and checking for 
>>> >> >> regularity
>>> >> for Point Configurations and normal fans of Polyhedra
>>> >> >> 8978ff83f52 gh-39495: Add documentation of Gabidulin codes in the
>>> >> reference manual
>>> >> >> 98eec5d86fe gh-39494: Fix more doctests in meson_editable install
>>> >> >> cfbaaf16be2 gh-39491: fixing doctests failures in misc/latex*.py
>>> >> >> a2737325c19 gh-39489: fix several oeis related doctests
>>> >> >> 8a44c7365b7 gh-39488: Fix issue on matrix construction over integer 
>>> >> >> mod
>>> >> ring for large coefficients
>>> >> >> 78a3eede92c gh-39487: Improvement of the rendering of the 
>>> >> >> documentation
>>> >> in polynomial sequence
>>> >> >> 34b7f9050fb gh-39486: Finish changing Rational's round method default
>>> >> rounding to even
>>> >> >> 04afcf71552 gh-39485: Implement conversion from laurent series to
>>> >> rational function field
>>> >> >> ae158663847 gh-39482: fix one typo
>>> >> >> 83f7d065286 gh-39481: Fixed issue in list_plot where it assumed data
>>> >> had been enumerated when it might not have been
>>> >> >> 8e204dde3b3 gh-39479: Fixed crash when exp(0) of p-adic numbers is
>>> >> called
>>> >> >> 11ee7ca4e19 gh-39477: typing and details in tableaux files
>>> >> >> c61e562de76 gh-39476: typing annotation for gens method in rings and
>>> >> groups (pyx files)
>>> >> >> 85ce297ff2c gh-39474: convert gens method in modular to return tuple
>>> >> >> c732c6552e4 gh-39473: add tuple typing to gens methods in algebras
>>> >> >> 556d5f0eb80 gh-39466: remove some deprecations in groups
>>> >> >> c22e48480c3 gh-39456: Trivial simplifications for arccos
>>> >> >> 68744be391e gh-39454: remove deprecated stuff in permutation.py
>>> >> >> 784ff00867a gh-39449: Magma padics
>>> >> >> 897e722c74e gh-39423: Use import_module instead of find_spec
>>> >> >> 870aba20786 gh-39397: details in braid groups
>>> >> >> e6975bebe80 gh-39381: Allow system python 3.13
>>> >> >> b57e33797cf gh-39366: Add documentation to LaurentSeries point to
>>> >> accessors
>>> >> >> 357f95e088c gh-39365: Allow coercion from Frac(QQ[x]) to
>>> >> LaurentSeriesRing(QQ)
>>> >> >> 041336691f6 gh-39266: add parameter immutable to generators in
>>> >> `sage/graphs/digraph_generators.py` (part 2)
>>> >> >> e0806107d60 gh-39251: Require Python 3.11 or newer; remove outdated
>>> >> workarounds
>>> >> >> ac8406fba6a gh-39248: introduce new apozeta polynomial for posets
>>> >> >> 10edc54de0a gh-39215: Class polynomial for Drinfeld modules
>>> >> >> 2e0d6d201bf gh-39214: Add keyword prec for exponential and logarithm 
>>> >> >> of
>>> >> Drinfeld modules
>>> >> >> b5c26156430 gh-39212: Refactor period lattice
>>> >> >> d0e72a61433 gh-39128: Add note about makeflags and ninja parallelism
>>> >> >> 067ebbd0c8c gh-39093: Improve hack used in debug_options
>>> >> >> a89c57b64f8 gh-39092: Remove erroneous member declaration in
>>> >> farey_symbol
>>> >> >> cc231ef0353 gh-39061: Fix some errors in documentation of cachefunc
>>> >> >> f0581cbe397 gh-39025: Add reseed_rng option to p_iter_fork
>>> >> >> 290b261bc4f gh-38986: Allow CRT_list() to be called with one argument
>>> >> >> 0a278fc918e gh-38824: Turn some doctests in `ell_rational_field.py`
>>> >> into long tests
>>> >> >> c43cd23ee83 gh-38650: Add support for pseudomorphisms
>>> >> >> 6e82ee51eb9 gh-38108: Implicit function solver for lazy series
>>> >> >> 42d00ed27b3 gh-37173: Implemented `.ramified_places` and modified
>>> >> further methods to extend quaternion algebra functionality to number 
>>> >> fields
>>> >> >> 8d7107c1aab gh-37158: use Parent in quotient rings too
>>> >> >> 766c7a0c5b8 (tag: 10.6.beta6) Updated SageMath version to 10.6.beta6
>>> >> >
>>> >> > --
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>>> >> https://groups.google.com/d/msgid/sage-release/aa27984d-e9b6-4eb4-b4a1-a422672e26a6n%40googlegroups.com
>>> >> .
>>> >>
>>> >
>
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