That's perfect, thanks!
Brett Dutro
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as an Airport' appear.
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On Mon, Jun 30, 2014 at 3:38 AM, Petr Danecek <p...@sanger.ac.uk> wrote:
> Hi Brett,
>
> I added math notes for SGB calculation here:
> http://samtools.github.io/bcftools/
> http://samtools.github.io/bcftools/rd-SegBias.pdf
>
> Best,
> Petr
>
>
> On Mon, 2014-06-23 at 09:38 -0500, Brett Dutro wrote:
> > I've looked all over, and I can't seem to find anywhere that documents
> > what the SGB field is in mpileup's VCF output (using samtools
> > 0.2.0-rc6). The header field ("Segregation based metric.") doesn't
> > really shed much light on it either. Is there a paper or some other
> > source that details what this value means and how it is calculated?
> >
> > Thanks,
> > Brett Dutro
> >
> > It is no coincidence that in no known language does the phrase 'As
> > pretty as an Airport' appear.
> > --Douglas Adams
> >
> >
> >
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