Hello Shane and Rob,
I am fixing a problem with pbwt, and now I get link warnings for htslib with a
current github install:
[Richards-MacBook-Pro:~/tmp/pbwt] rd% make
cc -g -O3 -I../htslib pbwtMain.o pbwtCore.o pbwtSample.o pbwtIO.o pbwtMatch.o
pbwtImpute.o pbwtPaint.o pbwtLikelihood.o pbwtMerge.o pbwtGeneticMap.o
pbwtHtslib.o hash.o dict.o array.o utils.o -lpthread ../htslib/libhts.a -lz -lm
-lbz2 -llzma -o pbwt
ld: warning: could not create compact unwind for _vcf_parse_format.isra.19:
stack subq instruction is too different from dwarf stack size
ld: warning: could not create compact unwind for _cram_populate_ref: stack subq
instruction is too different from dwarf stack size
ld: warning: could not create compact unwind for _rans_uncompress_O0: stack
subq instruction is too different from dwarf stack size
I haven’t seen this before. Should I just ignore these, or is there a way to
remove them?
Thanks, Richard
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