Re: (relax:22417) GVFS-RemoteVolumeMonitor-WARNING
Nihao Edward, Thanks for developing the powerful software for NMR relaxation analysis. I used the "svn co svn://svn.gna.org/svn/relax/trunk relax_trunk" to install the software, so I guess it is the newest 4.0.3 version. I am not so familiar with linux, and I opened the system monitor, and see it said the "Oracle linux Server". I will attach the log files in the bug report. Yesterday I tried the gui mode again and used all the 8 cpu of my computer. It shuts down with the same error this morning. I would try the prompt script mode this time as you suggested. Also, as my python version is 2.6.6, should I try an old relax version? I really appreciate your help. Shen On Mon, Jan 16, 2017 at 5:08 PM, Edward d'Auvergne wrote: > On 16 January 2017 at 21:50, Xu, Shenyuan wrote: > > Dear relax managers, > > > > I installed the relax based on the installation guide on "installation > > linux". > > > > When I run the full test suite command, it shows the "relax:22417 > > GVFS-RemoteVolumeMonitor-WARNING". Then I opened the log file, it said > > system/funtional testsfailed > > unit testsok > > gui tests-ok > > software verification testsfailed > > synopsis-failed. > > > > Then I run a R1 analysis on the gui mode and after three days, relax shut > > down itself and on the terminal, it said: "mpirun noticed that process > rank > > 0 with PID 28252 on node tetra exited on signal 9 (Killed)". > > > > What should I do? > > > > I really appreciate your help! > > Nihao Shen! > > Welcome to the relax mailing lists. For the error you see, which > version of relax are you using and which operating system (and > version) are you using? For bugs, I would recommend creating a bug > report at https://gna.org/bugs/?group=relax and attaching log files > there. For example the full log file from test suite would be very > useful to see what is happening. Note that you cannot attach large > files to a mailing list post - this is blocked to avoid a large strain > on the infrastructure. > > Also, I don't know how stable OpenMPI is when running through the GUI, > but that mpirun shutdown notice sounds like the GUI was killed by the > operating system for some unknown reason (likely outside of relax's > control). Hopefully that wouldn't happen on a second run. > Alternatively, you could try the prompt/script UI mode to see if the > GUI is the issue. > > Regards, > > Edward > ___ relax (http://www.nmr-relax.com) This is the relax-users mailing list relax-users@gna.org To unsubscribe from this list, get a password reminder, or change your subscription options, visit the list information page at https://mail.gna.org/listinfo/relax-users
Re: (relax:22417) GVFS-RemoteVolumeMonitor-WARNING
On 16 January 2017 at 21:50, Xu, Shenyuan wrote: > Dear relax managers, > > I installed the relax based on the installation guide on "installation > linux". > > When I run the full test suite command, it shows the "relax:22417 > GVFS-RemoteVolumeMonitor-WARNING". Then I opened the log file, it said > system/funtional testsfailed > unit testsok > gui tests-ok > software verification testsfailed > synopsis-failed. > > Then I run a R1 analysis on the gui mode and after three days, relax shut > down itself and on the terminal, it said: "mpirun noticed that process rank > 0 with PID 28252 on node tetra exited on signal 9 (Killed)". > > What should I do? > > I really appreciate your help! Nihao Shen! Welcome to the relax mailing lists. For the error you see, which version of relax are you using and which operating system (and version) are you using? For bugs, I would recommend creating a bug report at https://gna.org/bugs/?group=relax and attaching log files there. For example the full log file from test suite would be very useful to see what is happening. Note that you cannot attach large files to a mailing list post - this is blocked to avoid a large strain on the infrastructure. Also, I don't know how stable OpenMPI is when running through the GUI, but that mpirun shutdown notice sounds like the GUI was killed by the operating system for some unknown reason (likely outside of relax's control). Hopefully that wouldn't happen on a second run. Alternatively, you could try the prompt/script UI mode to see if the GUI is the issue. Regards, Edward ___ relax (http://www.nmr-relax.com) This is the relax-users mailing list relax-users@gna.org To unsubscribe from this list, get a password reminder, or change your subscription options, visit the list information page at https://mail.gna.org/listinfo/relax-users
(relax:22417) GVFS-RemoteVolumeMonitor-WARNING
Dear relax managers, I installed the relax based on the installation guide on "installation linux". When I run the full test suite command, it shows the "relax:22417 GVFS-RemoteVolumeMonitor-WARNING". Then I opened the log file, it said system/funtional testsfailed unit testsok gui tests-ok software verification testsfailed synopsis-failed. Then I run a R1 analysis on the gui mode and after three days, relax shut down itself and on the terminal, it said: "mpirun noticed that process rank 0 with PID 28252 on node tetra exited on signal 9 (Killed)". What should I do? I really appreciate your help! Shen ___ relax (http://www.nmr-relax.com) This is the relax-users mailing list relax-users@gna.org To unsubscribe from this list, get a password reminder, or change your subscription options, visit the list information page at https://mail.gna.org/listinfo/relax-users
