Re: [ccp4bb] The effect of His-tag location on crystallization

2012-06-28 Thread Hargreaves, David
In trying to reproduce a very nice public structure a cloning mis-hap put a 
-GS- prior to the C-term 6His tag. The resultant crystals had a 500Ang C 
dimension and 16 molecules in the au. Even a single amino acid could make all 
the difference

David Hargreaves
Associate Principal Scientist
_
AstraZeneca
DECS, CPSS
Mereside, 50F49, Alderley Park, Cheshire, SK10 4TF
Tel +44 (0)01625 518521  Fax +44 (0) 1625 232693
David.Hargreaves @astrazeneca.com
 
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-Original Message-
From: CCP4 bulletin board [mailto:CCP4BB@JISCMAIL.AC.UK] On Behalf Of weliu
Sent: 27 June 2012 02:07
To: CCP4BB@JISCMAIL.AC.UK
Subject: [ccp4bb] The effect of His-tag location on crystallization

Dear all,

We crystallized a protein and found that crystal quality greatly depended on 
the location of His-tag. When a His-tag was added at the C-terminus, only 
crystalline precipitate or spherical quasi crystals were grown. However, when 
the His-tag was moved to the N-terminus, single crystals were grown under a 
number of conditions, and the best one diffracted to 1.7 angstrom after 
optimization. I was wondering if there were published reports describing 
similar cases.

Thank you in advance

Wei Liu


Re: [ccp4bb] The effect of His-tag location on crystallization

2012-06-27 Thread R. M. Garavito
Most of the comments you will get will be anecdotal in that people will report 
the successful results and do not take the time or effort to characterize the 
less successful results.  This often occurs because the tagged portion of the 
protein is most often disordered, even in the best crystals.  Thus, other than 
saying tagging on this end works, but tagging on that end doesn't, there is 
little more you can say.  Each case will be different, and it is almost 
impossible to arrive at any generalized conclusion.

We prefer C-terminal tagged proteins for a number of reasons, but if an 
N-terminally tagged protein crystallizes well, so be it.  Of the dozens of N- 
and C-tagged protein structures we have solved in my lab and with 
collaborators, I have only seen one case of an ordered His-tag:  the His 
residues had coordinated Cd ions, which proved essential for getting good 
crystals.  However, beyond that there was not much more to say.

For your protein and the resulting crystals, an N-terminally tagged protein 
crystallized well.  Whether you can draw any more conclusions from these 
results depends on characterizing crystals of both N- and C-tagged proteins.  
Just assuming that the C-tagged protein is trying to crystallize in the same or 
related crystal form as the N-tagged protein is an unwarranted assumption 
without experimental evidence to back it up.  That is why most groups just run 
with the winner.

Cheers,

Michael



R. Michael Garavito, Ph.D.
Professor of Biochemistry  Molecular Biology
603 Wilson Rd., Rm. 513   
Michigan State University  
East Lansing, MI 48824-1319
Office:  (517) 355-9724 Lab:  (517) 353-9125
FAX:  (517) 353-9334Email:  rmgarav...@gmail.com





On Jun 26, 2012, at 9:06 PM, weliu wrote:

 Dear all,
 
 We crystallized a protein and found that crystal quality greatly depended on 
 the location of His-tag. When a His-tag was added at the C-terminus, only 
 crystalline precipitate or spherical quasi crystals were grown. However, when 
 the His-tag was moved to the N-terminus, single crystals were grown under a 
 number of conditions, and the best one diffracted to 1.7 angstrom after 
 optimization. I was wondering if there were published reports describing 
 similar cases.
 
 Thank you in advance
 
 Wei Liu  



Re: [ccp4bb] The effect of His-tag location on crystallization

2012-06-27 Thread Phoebe Rice
With Flp recombinase - DNA complexes, a C-terminal His tag triggered a 
different (but sadly not better) crystal form, and the His side chains packed 
against the bases at the end of a neighboring DNA duplex.  

=
Phoebe A. Rice
Dept. of Biochemistry  Molecular Biology
The University of Chicago
phone 773 834 1723
http://bmb.bsd.uchicago.edu/Faculty_and_Research/01_Faculty/01_Faculty_Alphabetically.php?faculty_id=123
http://www.rsc.org/shop/books/2008/9780854042722.asp


 Original message 
Date: Wed, 27 Jun 2012 10:14:58 -0400
From: CCP4 bulletin board CCP4BB@JISCMAIL.AC.UK (on behalf of R. M. 
Garavito rmgarav...@gmail.com)
Subject: Re: [ccp4bb] The effect of His-tag location on crystallization  
To: CCP4BB@JISCMAIL.AC.UK

   Most of the comments you will get will be anecdotal
   in that people will report the successful results
   and do not take the time or effort to characterize
   the less successful results.  This often occurs
   because the tagged portion of the protein is most
   often disordered, even in the best crystals.  Thus,
   other than saying tagging on this end works, but
   tagging on that end doesn't, there is little more
   you can say.  Each case will be different, and it is
   almost impossible to arrive at any generalized
   conclusion.
   We prefer C-terminal tagged proteins for a number of
   reasons, but if an N-terminally tagged protein
   crystallizes well, so be it.  Of the dozens of N-
   and C-tagged protein structures we have solved in my
   lab and with collaborators, I have only seen one
   case of an ordered His-tag:  the His residues had
   coordinated Cd ions, which proved essential for
   getting good crystals.  However, beyond that there
   was not much more to say.
   For your protein and the resulting crystals, an
   N-terminally tagged protein crystallized well.
Whether you can draw any more conclusions from
   these results depends on characterizing crystals of
   both N- and C-tagged proteins.  Just assuming that
   the C-tagged protein is trying to crystallize in the
   same or related crystal form as the N-tagged protein
   is an unwarranted assumption without experimental
   evidence to back it up.  That is why most groups
   just run with the winner.
   Cheers,
   Michael
   
   R. Michael Garavito, Ph.D.
   Professor of Biochemistry  Molecular Biology
   603 Wilson Rd., Rm. 513   
   Michigan State University  
   East Lansing, MI 48824-1319
   Office:  (517) 355-9724 Lab:  (517) 353-9125
   FAX:  (517) 353-9334  
Email:  rmgarav...@gmail.com
   
   On Jun 26, 2012, at 9:06 PM, weliu wrote:

 Dear all,

 We crystallized a protein and found that crystal
 quality greatly depended on the location of
 His-tag. When a His-tag was added at the
 C-terminus, only crystalline precipitate or
 spherical quasi crystals were grown. However, when
 the His-tag was moved to the N-terminus, single
 crystals were grown under a number of conditions,
 and the best one diffracted to 1.7 angstrom after
 optimization. I was wondering if there were
 published reports describing similar cases.

 Thank you in advance

 Wei Liu  


Re: [ccp4bb] The effect of His-tag location on crystallization

2012-06-27 Thread Brad Bennett
I think it was an N-terminal RGS-type His tag in 3O8Y (human lipoxygenase)
that mediated crystal contacts with a symmetry related molecule. As I
recall, this tag composed a B-strand that formed a nice interface with a
native B-strand of the symmetry related molecule. Pretty cool...

-Brad

On Wed, Jun 27, 2012 at 11:00 AM, Phoebe Rice pr...@uchicago.edu wrote:

 With Flp recombinase - DNA complexes, a C-terminal His tag triggered a
 different (but sadly not better) crystal form, and the His side chains
 packed against the bases at the end of a neighboring DNA duplex.

 =
 Phoebe A. Rice
 Dept. of Biochemistry  Molecular Biology
 The University of Chicago
 phone 773 834 1723

 http://bmb.bsd.uchicago.edu/Faculty_and_Research/01_Faculty/01_Faculty_Alphabetically.php?faculty_id=123
 http://www.rsc.org/shop/books/2008/9780854042722.asp


  Original message 
 Date: Wed, 27 Jun 2012 10:14:58 -0400
 From: CCP4 bulletin board CCP4BB@JISCMAIL.AC.UK (on behalf of R. M.
 Garavito rmgarav...@gmail.com)
 Subject: Re: [ccp4bb] The effect of His-tag location on crystallization
 To: CCP4BB@JISCMAIL.AC.UK
 
Most of the comments you will get will be anecdotal
in that people will report the successful results
and do not take the time or effort to characterize
the less successful results.  This often occurs
because the tagged portion of the protein is most
often disordered, even in the best crystals.  Thus,
other than saying tagging on this end works, but
tagging on that end doesn't, there is little more
you can say.  Each case will be different, and it is
almost impossible to arrive at any generalized
conclusion.
We prefer C-terminal tagged proteins for a number of
reasons, but if an N-terminally tagged protein
crystallizes well, so be it.  Of the dozens of N-
and C-tagged protein structures we have solved in my
lab and with collaborators, I have only seen one
case of an ordered His-tag:  the His residues had
coordinated Cd ions, which proved essential for
getting good crystals.  However, beyond that there
was not much more to say.
For your protein and the resulting crystals, an
N-terminally tagged protein crystallized well.
 Whether you can draw any more conclusions from
these results depends on characterizing crystals of
both N- and C-tagged proteins.  Just assuming that
the C-tagged protein is trying to crystallize in the
same or related crystal form as the N-tagged protein
is an unwarranted assumption without experimental
evidence to back it up.  That is why most groups
just run with the winner.
Cheers,
Michael

R. Michael Garavito, Ph.D.
Professor of Biochemistry  Molecular Biology
603 Wilson Rd., Rm. 513
Michigan State University
East Lansing, MI 48824-1319
Office:  (517) 355-9724 Lab:  (517) 353-9125
FAX:  (517) 353-9334
 Email:  rmgarav...@gmail.com

On Jun 26, 2012, at 9:06 PM, weliu wrote:
 
  Dear all,
 
  We crystallized a protein and found that crystal
  quality greatly depended on the location of
  His-tag. When a His-tag was added at the
  C-terminus, only crystalline precipitate or
  spherical quasi crystals were grown. However, when
  the His-tag was moved to the N-terminus, single
  crystals were grown under a number of conditions,
  and the best one diffracted to 1.7 angstrom after
  optimization. I was wondering if there were
  published reports describing similar cases.
 
  Thank you in advance
 
  Wei Liu



Re: [ccp4bb] The effect of His-tag location on crystallization

2012-06-27 Thread Bosch, Juergen
Here's another example:
http://www.pdb.org/pdb/explore/explore.do?structureId=2F62
dimer with His-tag-ears without His6-tag this would not have been possible.

Jürgen

On Jun 27, 2012, at 12:04 PM, Brad Bennett wrote:

I think it was an N-terminal RGS-type His tag in 3O8Y (human lipoxygenase) that 
mediated crystal contacts with a symmetry related molecule. As I recall, this 
tag composed a B-strand that formed a nice interface with a native B-strand 
of the symmetry related molecule. Pretty cool...

-Brad

On Wed, Jun 27, 2012 at 11:00 AM, Phoebe Rice 
pr...@uchicago.edumailto:pr...@uchicago.edu wrote:
With Flp recombinase - DNA complexes, a C-terminal His tag triggered a 
different (but sadly not better) crystal form, and the His side chains packed 
against the bases at the end of a neighboring DNA duplex.

=
Phoebe A. Rice
Dept. of Biochemistry  Molecular Biology
The University of Chicago
phone 773 834 1723tel:773%20834%201723
http://bmb.bsd.uchicago.edu/Faculty_and_Research/01_Faculty/01_Faculty_Alphabetically.php?faculty_id=123
http://www.rsc.org/shop/books/2008/9780854042722.asp


 Original message 
Date: Wed, 27 Jun 2012 10:14:58 -0400
From: CCP4 bulletin board 
CCP4BB@JISCMAIL.AC.UKmailto:CCP4BB@JISCMAIL.AC.UK (on behalf of R. M. 
Garavito rmgarav...@gmail.commailto:rmgarav...@gmail.com)
Subject: Re: [ccp4bb] The effect of His-tag location on crystallization
To: CCP4BB@JISCMAIL.AC.UKmailto:CCP4BB@JISCMAIL.AC.UK

   Most of the comments you will get will be anecdotal
   in that people will report the successful results
   and do not take the time or effort to characterize
   the less successful results.  This often occurs
   because the tagged portion of the protein is most
   often disordered, even in the best crystals.  Thus,
   other than saying tagging on this end works, but
   tagging on that end doesn't, there is little more
   you can say.  Each case will be different, and it is
   almost impossible to arrive at any generalized
   conclusion.
   We prefer C-terminal tagged proteins for a number of
   reasons, but if an N-terminally tagged protein
   crystallizes well, so be it.  Of the dozens of N-
   and C-tagged protein structures we have solved in my
   lab and with collaborators, I have only seen one
   case of an ordered His-tag:  the His residues had
   coordinated Cd ions, which proved essential for
   getting good crystals.  However, beyond that there
   was not much more to say.
   For your protein and the resulting crystals, an
   N-terminally tagged protein crystallized well.
Whether you can draw any more conclusions from
   these results depends on characterizing crystals of
   both N- and C-tagged proteins.  Just assuming that
   the C-tagged protein is trying to crystallize in the
   same or related crystal form as the N-tagged protein
   is an unwarranted assumption without experimental
   evidence to back it up.  That is why most groups
   just run with the winner.
   Cheers,
   Michael
   
   R. Michael Garavito, Ph.D.
   Professor of Biochemistry  Molecular Biology
   603 Wilson Rd., Rm. 513
   Michigan State University
   East Lansing, MI 48824-1319
   Office:  (517) 355-9724tel:%28517%29%20355-9724 Lab:  (517) 
 353-9125tel:%28517%29%20353-9125
   FAX:  (517) 353-9334tel:%28517%29%20353-9334
Email:  rmgarav...@gmail.commailto:rmgarav...@gmail.com
   
   On Jun 26, 2012, at 9:06 PM, weliu wrote:

 Dear all,

 We crystallized a protein and found that crystal
 quality greatly depended on the location of
 His-tag. When a His-tag was added at the
 C-terminus, only crystalline precipitate or
 spherical quasi crystals were grown. However, when
 the His-tag was moved to the N-terminus, single
 crystals were grown under a number of conditions,
 and the best one diffracted to 1.7 angstrom after
 optimization. I was wondering if there were
 published reports describing similar cases.

 Thank you in advance

 Wei Liu


..
Jürgen Bosch
Johns Hopkins University
Bloomberg School of Public Health
Department of Biochemistry  Molecular Biology
Johns Hopkins Malaria Research Institute
615 North Wolfe Street, W8708
Baltimore, MD 21205
Office: +1-410-614-4742
Lab:  +1-410-614-4894
Fax:  +1-410-955-2926
http://web.mac.com/bosch_lab/






Re: [ccp4bb] The effect of His-tag location on crystallization

2012-06-27 Thread A. Radu Aricescu
Or indeed support surreal structures :-))
(PMID: 11853672 vs PMID: 14749821 and so on)

--
A. Radu Aricescu, PhD
University Research Lecturer
MRC Career Development Award Fellow

University of Oxford
Wellcome Trust Centre for Human Genetics
Division of Structural Biology
Roosevelt Drive, Oxford OX3 7BN
United Kingdom
Phone: +44-1865-287564
Fax: +44-1865-287547


 Original message 
Date: Wed, 27 Jun 2012 12:21:22 -0400
From: CCP4 bulletin board CCP4BB@JISCMAIL.AC.UK (on behalf of Bosch, 
Juergen jubo...@jhsph.edu)
Subject: Re: [ccp4bb] The effect of His-tag location on crystallization  
To: CCP4BB@JISCMAIL.AC.UK

   Here's another example:
   http://www.pdb.org/pdb/explore/explore.do?structureId=2F62
   dimer with His-tag-ears without His6-tag this
   would not have been possible.
   Jürgen
   On Jun 27, 2012, at 12:04 PM, Brad Bennett wrote:

 I think it was an N-terminal RGS-type His tag in
 3O8Y (human lipoxygenase) that mediated crystal
 contacts with a symmetry related molecule. As I
 recall, this tag composed a B-strand that formed a
 nice interface with a native B-strand of the
 symmetry related molecule. Pretty cool...
 -Brad

 On Wed, Jun 27, 2012 at 11:00 AM, Phoebe Rice
 pr...@uchicago.edu wrote:

   With Flp recombinase - DNA complexes, a
   C-terminal His tag triggered a different (but
   sadly not better) crystal form, and the His side
   chains packed against the bases at the end of a
   neighboring DNA duplex.

   =
   Phoebe A. Rice
   Dept. of Biochemistry  Molecular Biology
   The University of Chicago
   phone 773 834 1723
   
 http://bmb.bsd.uchicago.edu/Faculty_and_Research/01_Faculty/01_Faculty_Alphabetically.php?faculty_id=123
   http://www.rsc.org/shop/books/2008/9780854042722.asp

    Original message 
   Date: Wed, 27 Jun 2012 10:14:58 -0400
   From: CCP4 bulletin board
   CCP4BB@JISCMAIL.AC.UK (on behalf of R. M.
   Garavito rmgarav...@gmail.com)
   Subject: Re: [ccp4bb] The effect of His-tag
   location on crystallization
   To: CCP4BB@JISCMAIL.AC.UK
   
  Most of the comments you will get will be
   anecdotal
  in that people will report the successful
   results
  and do not take the time or effort to
   characterize
  the less successful results.  This often
   occurs
  because the tagged portion of the protein is
   most
  often disordered, even in the best crystals.
Thus,
  other than saying tagging on this end
   works, but
  tagging on that end doesn't, there is
   little more
  you can say.  Each case will be different,
   and it is
  almost impossible to arrive at any
   generalized
  conclusion.
  We prefer C-terminal tagged proteins for a
   number of
  reasons, but if an N-terminally tagged
   protein
  crystallizes well, so be it.  Of the dozens
   of N-
  and C-tagged protein structures we have
   solved in my
  lab and with collaborators, I have only seen
   one
  case of an ordered His-tag:  the His
   residues had
  coordinated Cd ions, which proved essential
   for
  getting good crystals.  However, beyond that
   there
  was not much more to say.
  For your protein and the resulting crystals,
   an
  N-terminally tagged protein crystallized
   well.
   Whether you can draw any more conclusions
   from
  these results depends on characterizing
   crystals of
  both N- and C-tagged proteins.  Just
   assuming that
  the C-tagged protein is trying to
   crystallize in the
  same or related crystal form as the N-tagged
   protein
  is an unwarranted assumption without
   experimental
  evidence to back it up.  That is why most
   groups
  just run with the winner.
  Cheers,
  Michael
   
   
  R. Michael Garavito, Ph.D.
  Professor of Biochemistry  Molecular
   Biology
  603 Wilson Rd., Rm. 513
  Michigan State University
  East Lansing, MI 48824-1319
  Office:  (517) 355-9724 Lab:  (517)
   353-9125
  FAX:  (517) 353-9334
   Email:  rmgarav...@gmail.com
   
   
  On Jun 26, 2012, at 9:06 PM, weliu wrote:
   
Dear all,
   
We crystallized a protein and found that
   crystal
quality greatly depended on the location
   of
His-tag. When a His-tag was added at the
C-terminus, only crystalline 

Re: [ccp4bb] The effect of His-tag location on crystallization

2012-06-27 Thread Florian Schmitzberger
Human leukotriene C4 synthase (PDB accession code: 2UUI) is another  
example, illustrating how an N-terminal polyhistidine-tag, in  
conjunction with metals, presumably facilitated crystallization.


On Jun 27, 2012, at 12:04 PM, Brad Bennett wrote:

I think it was an N-terminal RGS-type His tag in 3O8Y (human  
lipoxygenase) that mediated crystal contacts with a symmetry related  
molecule. As I recall, this tag composed a B-strand that formed a  
nice interface with a native B-strand of the symmetry related  
molecule. Pretty cool...


-Brad

On Wed, Jun 27, 2012 at 11:00 AM, Phoebe Rice pr...@uchicago.edu  
wrote:
With Flp recombinase - DNA complexes, a C-terminal His tag triggered  
a different (but sadly not better) crystal form, and the His side  
chains packed against the bases at the end of a neighboring DNA  
duplex.


=
Phoebe A. Rice
Dept. of Biochemistry  Molecular Biology
The University of Chicago
phone 773 834 1723
http://bmb.bsd.uchicago.edu/Faculty_and_Research/01_Faculty/01_Faculty_Alphabetically.php?faculty_id=123
http://www.rsc.org/shop/books/2008/9780854042722.asp


 Original message 
Date: Wed, 27 Jun 2012 10:14:58 -0400
From: CCP4 bulletin board CCP4BB@JISCMAIL.AC.UK (on behalf of R.  
M. Garavito rmgarav...@gmail.com)
Subject: Re: [ccp4bb] The effect of His-tag location on  
crystallization

To: CCP4BB@JISCMAIL.AC.UK

   Most of the comments you will get will be anecdotal
   in that people will report the successful results
   and do not take the time or effort to characterize
   the less successful results.  This often occurs
   because the tagged portion of the protein is most
   often disordered, even in the best crystals.  Thus,
   other than saying tagging on this end works, but
   tagging on that end doesn't, there is little more
   you can say.  Each case will be different, and it is
   almost impossible to arrive at any generalized
   conclusion.
   We prefer C-terminal tagged proteins for a number of
   reasons, but if an N-terminally tagged protein
   crystallizes well, so be it.  Of the dozens of N-
   and C-tagged protein structures we have solved in my
   lab and with collaborators, I have only seen one
   case of an ordered His-tag:  the His residues had
   coordinated Cd ions, which proved essential for
   getting good crystals.  However, beyond that there
   was not much more to say.
   For your protein and the resulting crystals, an
   N-terminally tagged protein crystallized well.
Whether you can draw any more conclusions from
   these results depends on characterizing crystals of
   both N- and C-tagged proteins.  Just assuming that
   the C-tagged protein is trying to crystallize in the
   same or related crystal form as the N-tagged protein
   is an unwarranted assumption without experimental
   evidence to back it up.  That is why most groups
   just run with the winner.
   Cheers,
   Michael
   
   R. Michael Garavito, Ph.D.
   Professor of Biochemistry  Molecular Biology
   603 Wilson Rd., Rm. 513
   Michigan State University
   East Lansing, MI 48824-1319
   Office:  (517) 355-9724 Lab:  (517) 353-9125
   FAX:  (517) 353-9334
Email:  rmgarav...@gmail.com
   
   On Jun 26, 2012, at 9:06 PM, weliu wrote:

 Dear all,

 We crystallized a protein and found that crystal
 quality greatly depended on the location of
 His-tag. When a His-tag was added at the
 C-terminus, only crystalline precipitate or
 spherical quasi crystals were grown. However, when
 the His-tag was moved to the N-terminus, single
 crystals were grown under a number of conditions,
 and the best one diffracted to 1.7 angstrom after
 optimization. I was wondering if there were
 published reports describing similar cases.

 Thank you in advance

 Wei Liu

















Re: [ccp4bb] The effect of His-tag location on crystallization

2012-06-27 Thread Karolina Michalska
You may want to have a look at 3ur7 and 3ur8. I have also another example
of a glycohydrolytic enzyme with an N-terminal His-tag sitting in the
active site of a symmetry-related molecule (not deposited yet).

Karolina



On 27/6/2012, Brad Bennett bradbennet...@gmail.com wrote:

I think it was an N-terminal RGS-type His tag in 3O8Y (human lipoxygenase)
that mediated crystal contacts with a symmetry related molecule. As I
recall, this tag composed a B-strand that formed a nice interface with a
native B-strand of the symmetry related molecule. Pretty cool...

-Brad

On Wed, Jun 27, 2012 at 11:00 AM, Phoebe Rice pr...@uchicago.edu wrote:

 With Flp recombinase - DNA complexes, a C-terminal His tag triggered a
 different (but sadly not better) crystal form, and the His side chains
 packed against the bases at the end of a neighboring DNA duplex.

 =
 Phoebe A. Rice
 Dept. of Biochemistry  Molecular Biology
 The University of Chicago
 phone 773 834 1723

 http://bmb.bsd.uchicago.edu/Faculty_and_Research/01_Faculty/01_Faculty_Alphabetically.php?faculty_id=123
 http://www.rsc.org/shop/books/2008/9780854042722.asp


  Original message 
 Date: Wed, 27 Jun 2012 10:14:58 -0400
 From: CCP4 bulletin board CCP4BB@JISCMAIL.AC.UK (on behalf of R. M.
 Garavito rmgarav...@gmail.com)
 Subject: Re: [ccp4bb] The effect of His-tag location on crystallization
 To: CCP4BB@JISCMAIL.AC.UK
 
Most of the comments you will get will be anecdotal
in that people will report the successful results
and do not take the time or effort to characterize
the less successful results.  This often occurs
because the tagged portion of the protein is most
often disordered, even in the best crystals.  Thus,
other than saying tagging on this end works, but
tagging on that end doesn't, there is little more
you can say.  Each case will be different, and it is
almost impossible to arrive at any generalized
conclusion.
We prefer C-terminal tagged proteins for a number of
reasons, but if an N-terminally tagged protein
crystallizes well, so be it.  Of the dozens of N-
and C-tagged protein structures we have solved in my
lab and with collaborators, I have only seen one
case of an ordered His-tag:  the His residues had
coordinated Cd ions, which proved essential for
getting good crystals.  However, beyond that there
was not much more to say.
For your protein and the resulting crystals, an
N-terminally tagged protein crystallized well.
 Whether you can draw any more conclusions from
these results depends on characterizing crystals of
both N- and C-tagged proteins.  Just assuming that
the C-tagged protein is trying to crystallize in the
same or related crystal form as the N-tagged protein
is an unwarranted assumption without experimental
evidence to back it up.  That is why most groups
just run with the winner.
Cheers,
Michael

R. Michael Garavito, Ph.D.
Professor of Biochemistry  Molecular Biology
603 Wilson Rd., Rm. 513
Michigan State University
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On Jun 26, 2012, at 9:06 PM, weliu wrote:
 
  Dear all,
 
  We crystallized a protein and found that crystal
  quality greatly depended on the location of
  His-tag. When a His-tag was added at the
  C-terminus, only crystalline precipitate or
  spherical quasi crystals were grown. However, when
  the His-tag was moved to the N-terminus, single
  crystals were grown under a number of conditions,
  and the best one diffracted to 1.7 angstrom after
  optimization. I was wondering if there were
  published reports describing similar cases.
 
  Thank you in advance
 
  Wei Liu



Re: [ccp4bb] The effect of His-tag location on crystallization

2012-06-26 Thread Bernhard Rupp (Hofkristallrat a.D.)
Google yields amongst others:

His-tag impact on structure
Acta Cryst. (2007). D63, 295–301

...quäl dich.

-Original Message-
From: CCP4 bulletin board [mailto:CCP4BB@JISCMAIL.AC.UK] On Behalf Of weliu
Sent: Tuesday, June 26, 2012 6:07 PM
To: CCP4BB@JISCMAIL.AC.UK
Subject: [ccp4bb] The effect of His-tag location on crystallization

Dear all,

We crystallized a protein and found that crystal quality greatly depended on
the location of His-tag. When a His-tag was added at the C-terminus, only
crystalline precipitate or spherical quasi crystals were grown. However,
when the His-tag was moved to the N-terminus, single crystals were grown
under a number of conditions, and the best one diffracted to 1.7 angstrom
after optimization. I was wondering if there were published reports
describing similar cases.

Thank you in advance

Wei Liu