Re: [COOT] Ramachandran plot - atom-selection

2017-10-26 Thread Karsten Dreifus 
On 23 October 2017 at 17:06, Bernhard Lohkamp  wrote:

> No. Its not functional. It is a placeholder and was meant to be filled but
> there is a new Ramachandran coming where it works ;-) In Paul's hands
> when... until then the current widget should probably be removed.
>
> B
>

Thanks Paul and B. Looking forward! (thanks for the copy fragment tip)!

Re: [COOT] Ramachandran plot - atom-selection

2017-10-23 Thread Bernhard Lohkamp 

Adding on a bit...

On 23/10/2017 12:45, Karsten Dreifus wrote:

Hi Paul,
I am using the dev version coot 0.8.9-pre (revision 6956). Trying to
use the Ramachandran plot atom-selection function. I used
"/1/A/10-20"
But does not filter. Any working examples?


No. Its not functional. It is a placeholder and was meant to be filled 
but there is a new Ramachandran coming where it works ;-) In Paul's 
hands when... until then the current widget should probably be removed.


B


Many thanks,
Karsten

(from 
http://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/web/docs/coot.html#Ball-and-Stick-Representation
)



--
***

Dr. Bernhard Lohkamp
Associate Professor/Docent
Div. Molecular Structural Biology
Dept. of Medical Biochemistry and Biophysics (MBB)
Karolinska Institutet
S-17177 Stockholm
Sweden

phone: (+46) 08-52487695
fax:   (+46) 08-327626
email: bernhard.lohk...@ki.se

Re: [COOT] Ramachandran plot - atom-selection

2017-10-23 Thread Paul Emsley 

On 23/10/2017 06:45, Karsten Dreifus wrote:

Hi Paul,
I am using the dev version coot 0.8.9-pre (revision 6956). Trying to
use the Ramachandran plot atom-selection function. I used
"/1/A/10-20"
But does not filter. 


Hi Karsten,

Yes, that dialog needs some work, doesn't it?  Sorry.  It's on the "must fix for 
0.8.9 release" list.

The work-around that I use is to Copy Fragment and do a Rama plot for that.  It is quite painful however (I 
often find myself editing the wrong molecule).


Paul

[COOT] Ramachandran plot - atom-selection

2017-10-23 Thread Karsten Dreifus 
Hi Paul,
I am using the dev version coot 0.8.9-pre (revision 6956). Trying to
use the Ramachandran plot atom-selection function. I used
"/1/A/10-20"
But does not filter. Any working examples?
Many thanks,
Karsten

(from 
http://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/web/docs/coot.html#Ball-and-Stick-Representation
)

[COOT] Ramachandran plot

2009-11-20 Thread chern 

Hi Paul,
I don't understand the changes in the Ramachandran. plot when I click on it. 
I see movement of allowed regions. Could you please explain that movement, 
what it means?


Maia

Re: [COOT] Ramachandran plot

2009-11-20 Thread Maia Cherney 

Hi Paul,
I just figured out the movements in the plot areas.

Please, disregard my question.

Maia