Computer science may solve the mystery of autism

2013-07-07 Thread Roger Clough
http://www.psypost.org/2013/02/network-analysis-of-the-brain-may-explain-features-of-autism-16683

Network? analysis of the brain may explain features of autism 
Boston Children's Hospital | February 27, 2013 | Autistic disorders / 1 comment 




A look at how the brain processes information finds a distinct pattern in 
children with autism spectrum disorders. Using EEGs to track the brain? 
electrical cross-talk, researchers from Boston Children? Hospital have found a 
structural difference in brain connections. Compared with neurotypical 
children, those with autism have multiple redundant
 connections between neighboring brain areas at the expense of long-distance 
links. 

The study, using a ?etwork analysis? like that used to study airlines or 
electrical grids, may help in understanding some classic behaviors in autism. 
It was published February 27 in BioMed Central? open access journal BMC 
Medicine, accompanied by a commentary. 
?e examined brain networks as a whole in terms of their capacity to transfer 
and process information,? says Jurriaan Peters, MD, of the Department of 
Neurology at Boston Children? Hospital, who is co-first author of the paper 
with Maxime Taquet, a PhD student in Boston Children? Computational Radiology 
Laboratory. ?hat we found may well change the way we look at the brains of 
autistic children.? 
Peters, Taquet and senior authors Simon Warfield, PhD, of the Computational 
Radiology Laboratory and Mustafa Sahin, MD, PhD, of Neurology, analyzed EEG 
recordings from two groups of autistic children: 16 children with classic 
autism, and 14 children whose autism is part of a genetic syndrome known as 
tuberous sclerosis complex (TSC). They compared these readings with EEGs from 
two control groups?46 healthy neurotypical children and 29 children with TSC 
but not autism. 
In both groups with autism, there were more short-range connections within 
different brain region, but fewer connections linking far-flung areas. 
A brain network that favors short-range over long-range connections seems to be 
consistent with autism? classic cognitive profile? child who excels at 
specific, focused tasks like memorizing streets, but who cannot integrate 
information across different brain areas into higher-order concepts. 
?or example, a child with autism may not understand why a face looks really 
angry, because his visual brain centers and emotional brain centers have less 
cross-talk,? Peters says. ?he brain cannot integrate these areas. It? doing a 
lot with the information locally, but it? not sending it out to the rest of the 
brain.? 
Network analysis? hot emerging branch of cognitive neuroscience?howed a quality 
called ?esilience? in the children with autism?he ability to find multiple ways 
to get from point A to point B through redundant pathways. 
?uch like you can still travel from Boston to Brussels even if London Heathrow 
is shut down, by going through New York? JFK airport for example, information 
can continue to be transferred between two regions of the brain of children 
with autism,? says Taquet. ?n such a network, no hub plays a specific role, and 
traffic may flow along many redundant routes.? 
This quality of redundancy is consistent with cellular and molecular evidence 
for decreased ?runing? of brain connections in autism. While it may be good for 
an airline, it may indicate a brain that responds in the same way to many 
different kinds of situations and is less able to focus on the stimuli that are 
most important. 
?t? a simpler, less specialized network that? more rigid, less able to respond 
to stimulation from the environment,? says Peters. 
The study showed that both groups of children with tuberous sclerosis complex 
had reduced connectivity overall, but only those who also had autism had the 
pattern of increased short-range versus long-range connections (See image). 
Under a recently announced NIH Autism Center of Excellence Grant, Peters and 
his colleagues will repeat the analysis as part of a multicenter study, taking 
EEG recordings prospectively under uniform conditions. 
The current study builds on recent work by Peters, Sahin and colleagues, which 
imaged nerve fibers in autistic patients and showed structural abnormalities in 
brain connectivity. Other recent work at Boston Children?, led by Frank Duffy, 
PhD, of Neurology, looked at ?oherence,? or the degree of synchrony between any 
two given EEG signals, and found altered connectivity between brain regions in 
children with autism. 
Yet another recent study, led by Boston Children? informatics researcher 
William Bosl, PhD, and Charles A. Nelson, PhD, research director of the 
Developmental Medicine Center, looked at the degree of randomness in EEG 
signals, an indirect indicator of connectivity, and found patterns that 
distinguished infants at increased risk for autism from controls. 


http://dougsamu.wordpress.com doug rogers  
Investigate 

A modern theodicy based on noise

2013-07-07 Thread Roger Clough
A modern theodicy based on noise

Leibniz developed a theodicy based on his two logics of
necessity and contingency, where contingency or
lack of order is responsible for the sometimes chaotic
nature of life down here. Even so, Leibniz said, 
since God is good, he made the best world possible
from all of the choices he had. 

Reflecting on this, it appears to me that 
evil and suffering are just noise in an imperfect universe.

Dr. Roger B Clough NIST (ret.) [1/1/2000]
See my Leibniz site at
http://independent.academia.edu/RogerClough

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Re: Which one result in maths has surprised you the most?

2013-07-07 Thread Alberto G. Corona
Now for me the most surprising thing is Homotophy type theory that
unifies spaces, proofs, computations and category theory in a different
foundation for mathematics. Redefine a proof as the existence of paths that
connect objects in a space with homological properties, but not distances.
It is constructive and it is free from the Russell paradox and the Gödel
paradox, since type theory where made with this purpose (and set theory is
a particular case).

http://existentialtype.wordpress.com/2013/06/22/whats-the-big-deal-with-hott/


2013/7/6 Telmo Menezes te...@telmomenezes.com


 http://math.stackexchange.com/questions/2949/which-one-result-in-maths-has-surprised-you-the-most

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Study Links Autism With Antidepressant Use During Pregnancy

2013-07-07 Thread Roger Clough
http://parenting.blogs.nytimes.com/2013/04/22/study-links-autism-with-antidepressant-use-during-pregnancy/

April 22, 2013, 11:57 am 
Study Links Autism With Antidepressant Use During Pregnancy
By KJ DELL'ANTONIA
A cautiously worded study based on data collected in Sweden has found that “in 
utero exposure to both selective serotonin reuptake inhibitors (S.S.R.I.’s) and 
nonselective monoamine reuptake inhibitors (tricyclic antidepressants) was 
associated with an increased risk of autism spectrum disorders, particularly 
without intellectual disability.”
The Swedish medical birth register (which contains data on current drug use 
reported by mothers early in their pregnancies), along with a system of 
publicly funded screenings for autism spectrum disorders and extensive national 
and regional registers of various health issues, make a detailed, 
population-based case-control study possible — one that controls for other 
variables like family income, parent educational level, maternal and paternal 
age and even maternal region of birth (all factors the authors note have been 
previously associated with autism). 
This is the second study in two years to associate antidepressant use during 
pregnancy with an increased incidence of autism in exposed children. An 
earlier, smaller study in California also found a modest increase in risk. The 
Sweden-based study could not (and did not) exclude the possibility that it was 
the severe depression, rather than the use of antidepressants, that created the 
association, but the smaller California study (which considered only 
S.S.R.I.’s) found “no increase in risk” for mothers with a history of mental 
health treatment in the absence of prenatal exposure to S.S.R.I.’s.
The authors of the current study took a very cautious approach to their 
findings:

The results of the present study as well as the U.S. study present a major 
dilemma in relation to clinical advice to pregnant women with depression. If 
antidepressants increase the risk of autism spectrum disorder, it would be 
reasonable to warn women about this possibility. However, if the association 
actually reflects the risk of autism spectrum disorder related to the 
nongenetic effects of severe depression during pregnancy, treatment may reduce 
the risk. Informed decisions would also need to consider weighing the wider 
risks of untreated depression with the other adverse outcomes related to 
antidepressant use. With the current evidence, if the potential risk of autism 
were a consideration in the decision-making process, it may be reasonable to 
think about, wherever appropriate, nondrug approaches such as psychological 
treatments. However, their timely availability to pregnant women will need to 
be enhanced.
Others working in the field are more inclined to draw a line between the 
prenatal drug exposure and the increased risk of autism. “It really shouldn’t 
come as that much of a surprise given that numerous animal studies have shown 
that exposure during development leads to changes in the brain and changes in 
behavior — often that mimic autism,” said Dr. Adam C. Urato, assistant 
professor of obstetrics and gynecology at the Tufts University School of 
Medicine and chairman of the department of obstetrics and gynecology at 
MetroWest Medical Center in Framingham, Mass. (Dr. Urato obviously didn’t speak 
in links, but you can find the animal studies he refers to here and here.) 
“And why should it surprise us that medications that can change brain chemistry 
and function might alter the development of the brain and behavior?” Dr. Urato 
argues that the risks of antidepressant use during pregnancy outweigh what he 
sees as the limited benefits. 
One conclusion that is simple to draw is that it’s extraordinarily difficult 
for a pregnant woman with clinical depression to find some definitive answer 
about what’s best for her in her situation. I’ve spoken to other researchers in 
the past who have described for me how difficult it is to put together a study 
that separates the risks of depression itself in pregnancy from the risks, if 
any, of the drugs used to treat it. As the researchers in Sweden note, it’s 
unlikely that conclusive evidence on this issue will ever be available. 
If you’ve been pregnant with clinical depression, where did you go to find the 
information and advice you needed?
Updated | May 29, 2013: An earlier version of this update quantified the 
“modest” increase in attributable risk as 0.6 percent in the studied 
population. While Dr. Dheeraj Rai, one of the authors of the study, confirmed 
this figure, a number of readers and medical professionals raised questions. So 
we went back to Dr. Rai for further explanation. Here is what he wrote:
“The subject of antidepressant use during pregnancy, and any possible 
association with autism, is one that understandably evokes great emotion — even 
more so because at the current stage we don’t have a definitive answer. Readers 
of our 

Neuroscience about Newton

2013-07-07 Thread Evgenii Rudnyi

Lovely quotes from

Michael S. Gazzaniga, Who’s in Charge?: Free Will and the Science of the 
Brain


that show how physics is made.

“I can’t Believe My Eyes!

In moment-to-moment activity, the interpreter [in the brain] is always 
dealing  with the changing inputs from sites in the brain where activity 
is going on.  Sitting under the apple tree, Isaac Newton, indulging in 
that most human traits to constantly seek explanations and causes for 
things,  asked himself, ‘Why did the apple fall down?  H … Nothing 
pushed it. Why doesn’t it go up?’ Newton was engaging in two different 
types of processing concerned with causality,  and we have found one 
type occurs in right hemisphere, and the other in the left.”


“So when Newton observed that the apple fell but perceived no observable 
interaction that caused it, he was using his right hemisphere. For other 
animals, that is the end of the story. But it was not good enough for 
Newton. He went to employ causal inference, the application of logical 
rules, which, as you may have guessed, is a bailiwick of the left 
hemisphere.”


Evgenii
--
http://blog.rudnyi.ru/2013/07/neuroscience-about-newton.html

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Re: Which one result in maths has surprised you the most?

2013-07-07 Thread Richard Ruquist
That 1+2+3+4+5+..to infinity equals minus 1/12


On Sun, Jul 7, 2013 at 4:40 AM, Alberto G. Corona agocor...@gmail.comwrote:

 Now for me the most surprising thing is Homotophy type theory that
 unifies spaces, proofs, computations and category theory in a different
 foundation for mathematics. Redefine a proof as the existence of paths that
 connect objects in a space with homological properties, but not distances.
 It is constructive and it is free from the Russell paradox and the Gödel
 paradox, since type theory where made with this purpose (and set theory is
 a particular case).


 http://existentialtype.wordpress.com/2013/06/22/whats-the-big-deal-with-hott/


 2013/7/6 Telmo Menezes te...@telmomenezes.com


 http://math.stackexchange.com/questions/2949/which-one-result-in-maths-has-surprised-you-the-most

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Re: John Leslie's 'Infinite Minds: A Philosophical Cosmology'

2013-07-07 Thread Bruno Marchal


On 07 Jul 2013, at 04:41, meekerdb wrote:


On 7/6/2013 3:51 AM, Bruno Marchal wrote:
Atheists are usually just slightly more dishonest when talking like  
if science was on their side, which is a mockery of what is science  
at the start.


Atheists think science is on their side because the common  
monotheisms demand faith in ancient myths and they murdered and  
tortured people for teaching what is now common scienctific knowledge.


You might confuse religion and clericalism.

I don't think there is scientific knowledge per se. Only beliefs which  
might or not be true. Only when refuted we can bet they are locally  
false.


Bruno




I'd think someone named Bruno would be more aware of that.

Brent

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http://iridia.ulb.ac.be/~marchal/



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Re: Hitch

2013-07-07 Thread Bruno Marchal


On 07 Jul 2013, at 07:28, meekerdb wrote:





http://www.salon.com/2013/07/06/god_is_not_great_christopher_hitchens_is_not_a_liar/



I love Christopher Hitchens. I agree with many points. He is more an  
anticlerical than an atheist to me ...


Bruno





Brent

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http://iridia.ulb.ac.be/~marchal/



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Re: John Leslie's 'Infinite Minds: A Philosophical Cosmology'

2013-07-07 Thread meekerdb

On 7/7/2013 6:55 AM, Bruno Marchal wrote:


On 07 Jul 2013, at 04:41, meekerdb wrote:


On 7/6/2013 3:51 AM, Bruno Marchal wrote:
Atheists are usually just slightly more dishonest when talking like if science was on 
their side, which is a mockery of what is science at the start.


Atheists think science is on their side because the common monotheisms demand faith in 
ancient myths and they murdered and tortured people for teaching what is now common 
scienctific knowledge.


You might confuse religion and clericalism.


And you might confuse mysticism and religion.



I don't think there is scientific knowledge per se. Only beliefs which might or not be 
true. Only when refuted we can bet they are locally false.


Like the Earth is flat and has four corners?  Like rain is water that is not held back by 
the firmament?  Like disease is caused by impiety and sin?  Like God punishes mankind with 
death for having sought knowledge?


Brent
Religion has the exact same job assignment as science, to make sense of the world, that's 
why science and religion can never co exist peacefully. Science changes its stories based 
on better evidence, religion writes its stories on stone tablets.

  --- Bob Zannelli

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Re: Hitch

2013-07-07 Thread meekerdb

On 7/7/2013 6:56 AM, Bruno Marchal wrote:


On 07 Jul 2013, at 07:28, meekerdb wrote:





http://www.salon.com/2013/07/06/god_is_not_great_christopher_hitchens_is_not_a_liar/



I love Christopher Hitchens. I agree with many points. He is more an anticlerical than 
an atheist to me ...


Everybody called him an atheist.  He called himself an atheist.  I think you just don't 
like the term.


Brent

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Re: Hitch

2013-07-07 Thread Kim Jones

On 08/07/2013, at 10:45 AM, meekerdb meeke...@verizon.net wrote:

 On 7/7/2013 6:56 AM, Bruno Marchal wrote:
 
 On 07 Jul 2013, at 07:28, meekerdb wrote:
 
 
 
 
 http://www.salon.com/2013/07/06/god_is_not_great_christopher_hitchens_is_not_a_liar/
 
 
 I love Christopher Hitchens. I agree with many points. He is more an 
 anticlerical than an atheist to me ...
 
 Everybody called him an atheist.  He called himself an atheist.  I think you 
 just don't like the term.
 
 Brent
 

Forgivable though, don't you think? I used to call MYself an atheist too - 
until, bless me, I ran into the machine theology of one B. Marchal. Atheism 
seemed rather dull after a while, compared to this exciting new perspective on 
reality which ties in with quantum mechanics, mathematics, logic, computer 
science, and, as the Americans say, Christ knows what all. The reason some of 
us don't want to call Hitch an atheist is because that tars him with the wrong 
brush: the brush of public religion - IF you can handle the comp definition of 
atheism as a sibling public religion of the Jesus cult. I mean - either you 
believe in Big Daddy, JC and Spooky or you do not. If you don't believe in that 
trio, then you have no right (if you are an Englishman, that is) to believe in 
Mohammed and flying horses etc. An Englishman (essentially a racist entity) is 
going to have to bite the bullet and be an Atheist if he can't stand Xtianity. 
Public religions are about ethnicity and the power-groups that arise from 
tribalism - do not be fooled. Public religions are political parties; it's just 
that they do not appear on ballot papers because God Always Wins.

Let me clarify: there is organised ('public' or 3-p) religion (Jesus and his 
pals, Mohammed and his pals, Yaweh and his pals, Buddha and his pals and - for 
many - there is always football.) And, there is personal (1-p) religion. Every 
single one of us, even if we don't know it or believe it to be the case - has 
the latter because the only authentic definition of 'personal religion' is 
what you believe.

I do not believe that any two people can Believe the exact same thing in 
terms of ultimate things, because there is only a very little shareable 
component to ANY first person experience, right? We can't even agree whether 
some bloody thing is green, turquoise, aquamarine or blue let alone shake hands 
on what some unseen supernatural Sky Daddy is all about.

Hitchens was religious only in the personal sense, but then we all are - it's 
impossible not to believe something. Hitchens' signing on to the public 
religion of atheism was the same as my acting AS THOUGH I am a devout atheist 
in my daily public doings (I slag off at theocrats, clerics and the whole 
pedophilic secret-enclave corporate structure of the Catholic Church - exactly 
as the Late Great Hitch did so punishingly and eloquently whenever he could) 
yet,  in private - and talking to you lot (which, strangely enough seems to be 
much the same thing) I will admit to leaps of faith with regard to my 
personal beliefs, but now that I understand why I have to make these LOF 
(that's thrown in for John Clark) I don't get embarrassed by them anymore. 

Kim

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