[Fink-devel] Fwd: Your message to fink-core-private awaits moderator approval

2008-03-20 Thread mkv22



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Date: 16 March 2008 11:23:50 GMT
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Subject: Your message to fink-core-private awaits moderator approval

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   Fink master mirror?

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From:
Date: 16 March 2008 11:23:46 GMT
To: [EMAIL PROTECTED]
Subject: Fink master mirror?

Dear Developers,

I have hosting space at Host Monster, a subsidiary of Blue Host,  
with very good bandwidth and hard disk space. I would like to use  
that to provide a master mirror service for Fink. I have SSH access  
and other such facilities to my webspace.


However, I may need more step-by-step information on setting it up  
than it appears to be available from the Fink wiki site - http://wiki.finkproject.org/index.php/Fink:FinkMirrors 
. Please get back to me.


With many thanks.

Best regards,
M.
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Re: [Fink-devel] Switch to gcc43 (Was Re: [Fink-users] octave.info gcc-4.3)

2008-03-20 Thread Ben Abbott
On Mar 14, 2008, at 2:46 AM, Martin Costabel wrote:

 Jean-François Mertens wrote:
 []
 but right, if true it would encourage a fast update of anything in   
 fink to gcc43

 I too have come round to the conclusion that this is indeed the best  
 plan for action at this moment. I would suggest that we band  
 together and do this update rather quickly.

 I am CCing fink-devel so that the maintainers of the 28 packages  
 concerned get a chance to act, but I think we should just test this  
 upgrade for each of these packages and then simply go ahead and  
 change any package that builds correctly with gcc43. As far as I  
 know, no problem with the switch from gcc42 to gcc43 has yet been  
 reported.

 Here are the package descriptions concerned:

 graphics/pdftk.info
 libs/cfitsio.info
 sci/atlas.info
 sci/avl.info
 sci/cernlib2005.info
 sci/dx.info
 sci/fftw.info
 sci/fftw3.info
 sci/geant4.8.info
 sci/geant4.9.info
 sci/gopenmol.info
 sci/hdf5.info
 sci/libnc-dap3.info
 sci/netcdf-gfortran.info
 sci/octave-forge.info
 sci/octave.info
 sci/octplot.info
 sci/patchy4.info
 sci/plplot.info
 sci/qprop.info
 sci/root-pythia.info
 sci/root5-devel.info
 sci/root5.info
 sci/scilab.info
 sci/scipy-py.info
 sci/wip.info
 sci/xfoil.info
 utils/clamav.info

 -- 
 Martin

I continue to have problems with building the bleeding-edge octave  
sources. Unfortunately the bus error I encounter leaves gdb useless  
to me :-(

In a nut shell, I'm unable to execute A\B or mldivide(A,B) in  
octave for more than 96 eqns/unknowns.

It is has been pointed out that using gcc 4.0.1 (Apple's vecLib) will  
conflict with gfortran 4.1+, due to type mismatches resulting from how  
gfortran treats functions. I haven't looked at the detail, but when I  
googled, gfortran ff2c type mismatch quite a bit showed up.

The suggested solution is to add -ff2c to the fortran compile  
parameters.

I can't vouch for any of this, but if someone can tell me what to  
change in the atlas.info to pass -ff2c to gfortran, I can test  
suggested solution and report back.

Ben
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Re: [Fink-devel] [Fink-users] Switch to gcc43 (Was Re: octave.info gcc-4.3)

2008-03-20 Thread Ben Abbott

On Mar 19, 2008, at 11:40 PM, Jean-François Mertens wrote:


 On 20 Mar 2008, at 00:35, Ben Abbott wrote:

 I continue to have problems with building the bleeding-edge octave
 sources. Unfortunately the bus error I encounter leaves gdb useless
 to me :-(

 Bus Errors have to be understood on their own..
 Building atlas with tests enabled, I also get one (since gcc43):
 gfortran  -funroll-all-loops -fPIC -O3 -fomit-frame-pointer -fgcse- 
 sm -fgcse-las -ftree-loop-linear -mfpmath=sse -msse -msse2 -msse3 - 
 m32 -c cget35.f -o cget35.o
 cget35.f: In function 'cget35':
 cget35.f:1: internal compiler error: Bus error
 Please submit a full bug report,
 with preprocessed source if appropriate.
 See http://gcc.gnu.org/bugs.html for instructions.

When using Atlas, is Apple's lapack still used? ... or is there a  
lapack included with Atlas?

Was Atlas built using gfortran's -ff2c option?

Ben
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Re: [Fink-devel] [Fink-users] Switch to gcc43 (Was Re: octave.info gcc-4.3)

2008-03-20 Thread Ben Abbott

On Mar 19, 2008, at 11:40 PM, Jean-François Mertens wrote:


 On 20 Mar 2008, at 00:35, Ben Abbott wrote:

 I continue to have problems with building the bleeding-edge octave
 sources. Unfortunately the bus error I encounter leaves gdb useless
 to me :-(

 Bus Errors have to be understood on their own..
 Building atlas with tests enabled, I also get one (since gcc43):
 gfortran  -funroll-all-loops -fPIC -O3 -fomit-frame-pointer -fgcse- 
 sm -fgcse-las -ftree-loop-linear -mfpmath=sse -msse -msse2 -msse3 - 
 m32 -c cget35.f -o cget35.o
 cget35.f: In function 'cget35':
 cget35.f:1: internal compiler error: Bus error
 Please submit a full bug report,
 with preprocessed source if appropriate.
 See http://gcc.gnu.org/bugs.html for instructions.
 Still have to do it, to my shame, but those things must be done.
 Trying to run around doesn't solve the problem..

 Please file a proper bug-report for your problem too
 (You don't show any output, or context, so no way for me to be more  
 precise ..)

 JF

I found the link below that describes the problem raised by some of  
the octave developers.

http://icl.cs.utk.edu/lapack-forum/viewtopic.php?p=1859sid=cbd50d0289d46bde15842481ab2a9d1c

Ben
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Re: [Fink-devel] Switch to gcc43 (Was Re: [Fink-users] octave.info gcc-4.3)

2008-03-20 Thread Matthias Ringwald
Hi

just to let you know, so far gcj in gcc43-1000 does not work.
jack howarth did suggest a fix ( calling contrib/download_ecj in the  
source tree before compiling) but something failed.
I will re-try in the next days.

matthias


On 20.03.2008, at 00:35, Ben Abbott wrote:

 On Mar 14, 2008, at 2:46 AM, Martin Costabel wrote:

 Jean-François Mertens wrote:
 []
 but right, if true it would encourage a fast update of anything in
 fink to gcc43

 I too have come round to the conclusion that this is indeed the best
 plan for action at this moment. I would suggest that we band
 together and do this update rather quickly.

 I am CCing fink-devel so that the maintainers of the 28 packages
 concerned get a chance to act, but I think we should just test this
 upgrade for each of these packages and then simply go ahead and
 change any package that builds correctly with gcc43. As far as I
 know, no problem with the switch from gcc42 to gcc43 has yet been
 reported.

 Here are the package descriptions concerned:

 graphics/pdftk.info
...


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Re: [Fink-devel] Switch to gcc43 (Was Re: [Fink-users] octave.info gcc-4.3)

2008-03-20 Thread Alexander Hansen
Revision -1001 is out now.  I'm not sure if that fixes gcj (since it 
will take me until Sunday actually to build it on my machine).

Matthias Ringwald wrote:
 Hi

 just to let you know, so far gcj in gcc43-1000 does not work.
 jack howarth did suggest a fix ( calling contrib/download_ecj in the 
 source tree before compiling) but something failed.
 I will re-try in the next days.

 matthias


 On 20.03.2008, at 00:35, Ben Abbott wrote:

 On Mar 14, 2008, at 2:46 AM, Martin Costabel wrote:

 Jean-François Mertens wrote:
 []
 but right, if true it would encourage a fast update of anything in
 fink to gcc43

 I too have come round to the conclusion that this is indeed the best
 plan for action at this moment. I would suggest that we band
 together and do this update rather quickly.

 I am CCing fink-devel so that the maintainers of the 28 packages
 concerned get a chance to act, but I think we should just test this
 upgrade for each of these packages and then simply go ahead and
 change any package that builds correctly with gcc43. As far as I
 know, no problem with the switch from gcc42 to gcc43 has yet been
 reported.

 Here are the package descriptions concerned:

 graphics/pdftk.info
 ...



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