[galaxy-dev] [GSoC 2013] Introduction

2013-05-31 Thread Saket Choudhary
Hi Everyone!

I have been selected to work on the eQTL pipeline and visualisation for the
Galaxy Project as part of the Google Summer of Code 2013 (
http://www.google-melange.com/gsoc/homepage/google/gsoc2013)

I am pursuing my fourth year of undergraduate studies at Indian Institute
of Technology Bombay(http://www.iitb.ac.in/). My areas of interest are
broadly Bioinformatics and of lately I have been working on NGS problems.


I have created a blog here : http://galaxy-gsoc2013.blogspot.com/ . The
first post should be up soon.

My proposal is  here :
http://www.google-melange.com/gsoc/proposal/review/google/gsoc2013/saketkc/51001.
I would love to know your suggestions/comments.


I am relatively new to Galaxy, and some of my questions in the process
might be elementary, so kindly bear with it :)


Thanks

Saket Choudhary
___
Please keep all replies on the list by using reply all
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
  http://lists.bx.psu.edu/

To search Galaxy mailing lists use the unified search at:
  http://galaxyproject.org/search/mailinglists/

Re: [galaxy-dev] [GSoC 2013] Introduction

2013-05-31 Thread Björn Grüning
Welcome Saket!

Interesting topic ... wish you all the best and don't hesitate to ask.
There is also a galaxyproject channel on freenode.

Cheers,
Björn


 Hi Everyone!
 
 
 I have been selected to work on the eQTL pipeline and visualisation
 for the Galaxy Project as part of the Google Summer of Code 2013
 (http://www.google-melange.com/gsoc/homepage/google/gsoc2013)
 
 
 I am pursuing my fourth year of undergraduate studies at Indian
 Institute of Technology Bombay(http://www.iitb.ac.in/). My areas of
 interest are broadly Bioinformatics and of lately I have been working
 on NGS problems.
 
 I have created a blog here : http://galaxy-gsoc2013.blogspot.com/ .
 The first post should be up soon.
 
 
 My proposal is  here :
 http://www.google-melange.com/gsoc/proposal/review/google/gsoc2013/saketkc/51001
  . I would love to know your suggestions/comments.
 
 I am relatively new to Galaxy, and some of my questions in the process
 might be elementary, so kindly bear with it :)
 
 Thanks
 
 Saket Choudhary
 
 
 ___
 Please keep all replies on the list by using reply all
 in your mail client.  To manage your subscriptions to this
 and other Galaxy lists, please use the interface at:
   http://lists.bx.psu.edu/
 
 To search Galaxy mailing lists use the unified search at:
   http://galaxyproject.org/search/mailinglists/



___
Please keep all replies on the list by using reply all
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
  http://lists.bx.psu.edu/

To search Galaxy mailing lists use the unified search at:
  http://galaxyproject.org/search/mailinglists/

Re: [galaxy-dev] [GSoC 2013] Introduction

2013-05-31 Thread Björn Grüning
Welcome Saket!

Interesting topic ... wish you all the best and don't hesitate to ask.
There is also a #galaxyproject channel on freenode.

Cheers,
Björn
 Hi Everyone!
 
 
 I have been selected to work on the eQTL pipeline and visualisation
 for the Galaxy Project as part of the Google Summer of Code 2013
 (http://www.google-melange.com/gsoc/homepage/google/gsoc2013)
 
 
 I am pursuing my fourth year of undergraduate studies at Indian
 Institute of Technology Bombay(http://www.iitb.ac.in/). My areas of
 interest are broadly Bioinformatics and of lately I have been working
 on NGS problems.
 
 
 
 I have created a blog here : http://galaxy-gsoc2013.blogspot.com/ .
 The first post should be up soon.
 
 
 My proposal is  here :
 http://www.google-melange.com/gsoc/proposal/review/google/gsoc2013/saketkc/51001
  . I would love to know your suggestions/comments.
 
 
 
 
 
 I am relatively new to Galaxy, and some of my questions in the process
 might be elementary, so kindly bear with it :)
 
 
 
 Thanks
 
 Saket Choudhary
 
 
 ___
 Please keep all replies on the list by using reply all
 in your mail client.  To manage your subscriptions to this
 and other Galaxy lists, please use the interface at:
   http://lists.bx.psu.edu/
 
 To search Galaxy mailing lists use the unified search at:
   http://galaxyproject.org/search/mailinglists/



___
Please keep all replies on the list by using reply all
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
  http://lists.bx.psu.edu/

To search Galaxy mailing lists use the unified search at:
  http://galaxyproject.org/search/mailinglists/

Re: [galaxy-dev] [GSoC 2013] Introduction

2013-05-31 Thread Ross
Hi, Saket.
Welcome aboard - help is always available here or irc if you're in the
right timezone.
https://chgr.mc.vanderbilt.edu/plato/https://chgr.mc.vanderbilt.edu/plato/steps/3
is
a brand new eQTL option from Marylyn Ritchie's group I stumbled across at
http://gettinggeneticsdone.blogspot.com.au/ today - the comments about
plink are apt - it can be a pain to work with in my experience.




On Fri, May 31, 2013 at 4:35 PM, Saket Choudhary sake...@gmail.com wrote:

 Hi Everyone!

 I have been selected to work on the eQTL pipeline and visualisation for
 the Galaxy Project as part of the Google Summer of Code 2013 (
 http://www.google-melange.com/gsoc/homepage/google/gsoc2013)

 I am pursuing my fourth year of undergraduate studies at Indian Institute
 of Technology Bombay(http://www.iitb.ac.in/). My areas of interest are
 broadly Bioinformatics and of lately I have been working on NGS problems.


 I have created a blog here : http://galaxy-gsoc2013.blogspot.com/ . The
 first post should be up soon.

 My proposal is  here :
 http://www.google-melange.com/gsoc/proposal/review/google/gsoc2013/saketkc/51001.
  I would love to know your suggestions/comments.


 I am relatively new to Galaxy, and some of my questions in the process
 might be elementary, so kindly bear with it :)


 Thanks



___
Please keep all replies on the list by using reply all
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
  http://lists.bx.psu.edu/

To search Galaxy mailing lists use the unified search at:
  http://galaxyproject.org/search/mailinglists/

Re: [galaxy-dev] [GSoC 2013] Introduction

2013-05-31 Thread Samuel Lampa

Cool! :)

Feel free to join the Google+ group as well, and link your blog posts 
there, to notify users (and make it easy for us to share further):

http://gplus.to/galaxyportal

Cheers
// Samuel

On 05/31/2013 08:35 AM, Saket Choudhary wrote:

Hi Everyone!

I have been selected to work on the eQTL pipeline and visualisation 
for the Galaxy Project as part of the Google Summer of Code 2013 
(http://www.google-melange.com/gsoc/homepage/google/gsoc2013)


I am pursuing my fourth year of undergraduate studies at Indian 
Institute of Technology Bombay(http://www.iitb.ac.in/). My areas of 
interest are broadly Bioinformatics and of lately I have been working 
on NGS problems.



I have created a blog here : http://galaxy-gsoc2013.blogspot.com/ . 
The first post should be up soon.

snip


___
Please keep all replies on the list by using reply all
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
 http://lists.bx.psu.edu/

To search Galaxy mailing lists use the unified search at:
 http://galaxyproject.org/search/mailinglists/