Re: [GOAL] Elsevier is now the world's largest open access publisher (by number of journals)

2016-05-13 Thread Michael Eisen
Calling them the largest open access publisher because they publish the
most journals is ridiculous, and flies in the face of the whole idea of
open access, which is about articles, not journals.

On Thu, May 12, 2016 at 9:54 PM, Heather Morrison <
heather.morri...@uottawa.ca> wrote:

> Highlights
>
> Elsevier is now the world’s largest OA publisher with 511 fully open
> access titles (De Gruyter second at 435, Hindawi third at 405). These
> figures are drawn from the publishers’ websites.
>
> 315 of the 511 journals (63%) have an APC of 0 and an indication of “fee
> not payable by author”. This is primarily due to substantial active society
> and institutional involvement and sponsorship of these journals. A large
> percentage of these societies are keeping their copyright. I argue that
> this is not a bad thing; the alternative may not be a purer OA but rather
> Elsevier copyright retention.
>
> There are marked differences between Elsevier’s fully OA journals and
> their 2,149 hybrid journals. The OA journals tend to be clustered near the
> low end of the $0 - $5,000 APC range while the hybrids are skewed toward
> the high end. Society and institutional involvement and copyright retention
> is far more evident in the open access journals.
>
> Using data from Elsevier’s website and 2015 annual report, I assess the
> potential for Elsevier to achieve a full flip to OA while retaining the
> current $3 billion USD in revenue and 37% profit rate. By my calculations,
> Elsevier would need to charge APCs averaging from $5,000 to $11,000 USD.
> This is not realistic. Libraries and those seeking to further transition to
> open access should (in my opinion) expect that Elsevier will continue to
> seek substantial subscriptions revenue for some time to come, even given
> substantial support for APCs.
>
> For more detail and a link to a draft article on the topic, see:
>
> https://sustainingknowledgecommons.org/2016/05/13/elsevier-now-the-worlds-largest-open-access-publisher/
>
> best,
>
> --
> Dr. Heather Morrison
> Assistant Professor
> École des sciences de l'information / School of Information Studies
> University of Ottawa
> http://www.sis.uottawa.ca/faculty/hmorrison.html
> Sustaining the Knowledge Commons http://sustainingknowledgecommons.org/
> heather.morri...@uottawa.ca
>
>
>
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[GOAL] Re: One way to expand the OA movement: be more inclusive

2015-06-01 Thread Michael Eisen
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[GOAL] Re: One way to expand the OA movement: be more inclusive

2015-06-01 Thread Michael Eisen
Nobody is insisting on perfect *solutions* - none of the current solutions
are even close to perfect - but what Heather was proposing was a change in
*goals*. There is nothing to be gained - and a lot to lose - by redefining
what we mean by open access (and thereby what we are trying to achieve) in
order to wrap its umbrella around every imperfect effort to achieve it.

On Mon, Jun 1, 2015 at 11:26 AM, Dana Roth dzr...@library.caltech.edu
wrote:

  Taking Bernard's 'public road' analogy a little further ... one wonders
 his insistence on a 'perfect' solution isn't unfairly denigrating a
 reasonable (at least in the short term) alternative.

 The current situation, where the 'public NIH road' is closed temporarily
 (12 months) and one has to use a 'toll road' to access embargoed articles,
 seems much better than the situation before the creation of PubMed Central
 ... which now has 3.5 million freely available full text articles.

 Dana L. Roth
  Millikan Library / Caltech 1-32
 1200 E. California Blvd. Pasadena, CA 91125
 626-395-6423 fax 626-792-7540
 dzr...@library.caltech.edu
 http://library.caltech.edu/collections/chemistry.htm
   --
 *From:* goal-boun...@eprints.org [goal-boun...@eprints.org] on behalf of
 brent...@ulg.ac.be [brent...@ulg.ac.be]
 *Sent:* Monday, June 01, 2015 11:02 AM
 *To:* Global Open Access List (Successor of AmSci)
 *Subject:* [GOAL] Re: One way to expand the OA movement: be more inclusive

   When I want to drive on a public road, whether it is closed or
 temporarily closed makes no difference to me. It is not open. I can't use
 it.
 Embargo is antinomic to open.

  Bernard Rentier

 Le 1 juin 2015 à 18:26, Stevan Harnad amscifo...@gmail.com a écrit :

   On Mon, Jun 1, 2015 at 10:16 AM, Michael Eisen mbei...@gmail.com
 wrote:

 There's a difference between trying to be inclusive, and redefining goals
 and definitions to the point of being meaningless. I can not tell you how
 many times I hear that the NIH provides open access because they make
 articles freely available after a year. This is not just semantics. The
 belief that the NIH provides open access with its public access policy
 provides real drag on the quest to provide actual open access. You can
 argue about whether or not the policy is a good thing because it's a step
 in the right direction, or a bad thing because it reifies delayed access.
 But calling what the provide open access serves only to confuse people,
 to weaken our objectives and give the still far more powerful forces who do
 not want open access a way to resist pressure for it.


  It's nice to be able to agree with Mike Eisen.

  Open Access (OA) comes in two degrees
 http://www.sparc.arl.org/resource/gratis-and-libre-open-access: *Gratis
 OA* is immediate, permanent free online access and *Libre OA* is Gratis
 OA plus various re-use rights (up to CC-BY or even public domain).

  What both degrees of OA share is that they are both immediate (and
 permanent) http://www.dlib.org/dlib/march05/harnad/03harnad.html.

  Otherwise, there's just Delayed (Embargoed) Access, which is no more
 Open Access than Toll Access is.

  To treat Delayed Access as if it were a form of Open Access would be to
 reduce OA to meaninglessness (and would play into the hands of publishers
 who would like to see precisely that happen).

  Stevan Harnad


 On Mon, Jun 1, 2015 at 5:00 AM, Heather Morrison 
 heather.morri...@uottawa.ca wrote:

 hi David,

 Redefining open access and understanding that a great many people are
 moving towards open access in slightly different ways are two different
 things. My post will focus on the benefits of a more inclusive and
 welcoming approach to open access.

 For example, I have been conducting interviews and focus groups with
 editors of small journals that either are, or would like to be, open
 access. Behind the more than 10 thousand journals listed in DOAJ are
 probably much more than 10 thousand such editors, working hard to convince
 colleagues to move to open access, struggling to figure out how to do this
 in order to make ends meet. While some of us have been active and vocal in
 OA discussions and policy formulation, others have been quietly doing this
 work, often contributing a great deal of volunteer effort, over the years.
 We rarely hear from these people, but actively listening and figuring out
 how to provide the support needed for the journals to thrive in an OA
 environment is in the best interests of continuing towards a fully open
 access and sustainable system. These people are OA heroes from my
 perspective, whether their journal is currently OA or not. In my
 experience, when someone says their journal is free online after a year and
 they would like to move to OA, asking about the barriers and what is needed
 to move to OA results in productive discussions.

 OpenDOAR maintains a list of over 2,600 vetted open access archives:
 http://opendoar.org/

 OA archives have made a very great

[GOAL] Re: In Defence of Elsevier

2015-05-27 Thread Michael Eisen
collaboration networks
- We provide new services to authors such as the share link which
enables authors to post and share a customized link for 50 days free 
 access
to the final published article
- For authors who want free immediate access to their articles, we
continue to give all authors a choice to publish gold open access with a
wide number of open access journals and over 1600 hybrid titles

 Unlike the claims in this COAR document, the policy changes are based on
 feedback from our authors and institutional partners, they are
 evidence-based, and they are in alignment with the STM article sharing
 principles.  They introduce absolutely no changes in our embargo periods.
 And they are not intended to suddenly embargo and make inaccessible content
 currently available to readers – as we have already communicated in Elsevier
 Connect
 http://www.elsevier.com/connect/elsevier-updates-its-policies-perspectives-and-services-on-article-sharing
 .

 In fact, we have been developing services, in partnership with
 libraries, to help institutional repositories track research output and
 display content to their users. This includes:

 •  Sharing metadata: In order to showcase an institutions’ work, an
 institutional repository must identify their institution’s research output.
 By integrating the ScienceDirect metadata API into the repository, this
 task becomes simple. Even in cases where the repository doesn’t hold the
 full text manuscript, the article information and abstract can be
 displayed..

 •  Sharing user access information and embedding final articles: We
 are testing a workflow in which a user’s access level to the full text is
 checked on the fly, and if full text access is available, the user will be
 served the final published version, instead of the preprint or manuscript
 hosted by the repository. Users who are not entitled to view the full text
 of the final article will be led to the version available in the
 repository, or- if this is not available- to a page where they can view the
 first page of the article and options for accessing it (including via
 interlibrary loan). This ensures that users will always be served the best
 available version. This also enables the repository to display the best
 available version to their users even if no self-archived manuscript is
 available.

 We have not only updated our policies, we are active in developing and
 delivering technology that enables research to be shared more widely.

 COAR states that the addition of a CC-BY-NC-ND license is unhelpful.
 Feedback suggests that clarity about how manuscripts can be used is
 welcome, when asked in surveys often choose NC ND of their own volition
 (see the TF study from 2014 at
 http://www.tandf.co.uk/journals/explore/open-access-survey-june2014.pdf
 ), and it works across a broad range of use cases.

 Our refreshed policies are about green OA, and some elements of this –
 for example the use of embargo periods – are specifically for green OA when
 it is operating in tandem with the subscription business model.  Here time
 is needed for the subscription model to operate as libraries will
 understandably not subscribe if this material is available immediately and
 for free.

 In closing, we appreciate an open dialogue and are always happy to have
 a dialogue to discuss these, or any other, issues further.

 Dr Alicia Wise

 Director of Access and Policy

 Elsevier I The Boulevard I Langford Lane I Kidlington I Oxford I OX5 1GB

 M: +44 (0) 7823 536 826 I E: a.w...@elsevier.com

 *Twitter: @wisealic*



 --

 Elsevier Limited. Registered Office: The Boulevard, Langford Lane,
 Kidlington, Oxford, OX5 1GB, United Kingdom, Registration No. 1982084,
 Registered in England and Wales.


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[GOAL] Re: Elsevier: Trying to squeeze the virtual genie back into the physical bottle

2015-05-26 Thread Michael Eisen
 to consult
 with me about present and future OA policy conditions. I'll be happy to
 share with you which ones are logically incoherent and technically empty in
 today's virtual world. It could save Elsevier a lot of futile effort and
 save Elsevier authors from a lot of useless and increasingly arbitrary and
 annoying nuisance-rules.



 Best wishes,



 *Stevan Harnad*

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[GOAL] Re: How a flat APC with no price increase for 3 years can be a 6% - 77% price increase at the same time

2015-05-14 Thread Michael Eisen
It is true that distributing publication services locally would diminish
the risk of currency fluctuations affecting APC stability, but it does not
necessarily reduce costs for authors. I am sure, for example, that most
authors would be happier to pay APCs that varied +/- 25% around $1350 than
they would a fixed $2000.

On Wed, May 13, 2015 at 5:40 PM, Heather Morrison 
heather.morri...@uottawa.ca wrote:

  In this post Jihane Salhab  I explain the impact of currency variations
 and fluctuations on the APC model. PLOS ONE has been a good model for the
 past few years in at least one respect: maintaining the APC of $1,350 USD
 with no price increase over several years. However, if you happen to be
 paying in Euros, the PLOS ONE APC rose 14% from March to December of 2014,
 or 23% from March 20, 2014 to March 20, 2015. In South Africa, the price
 increased 58% in the same 3-year period; in Brazil, the price increase was
 77%.

  For details and to view a table illustrating the PLOS ONE pricing in 8
 currencies:

 http://sustainingknowledgecommons.org/2015/05/13/how-a-flat-apc-with-no-price-increase-for-3-years-can-be-a-6-77-price-increase/

  Any scholarly publishing system that involves cross-border payments,
 whether demand side (subscriptions / payments) or supply side (APC, journal
 hosting or other production services) has this disadvantage of pricing
 variability almost everywhere. In this case, US payers benefit from the
 flat fee, but anytime an APC is paid for a US scholar publishing in an
 international venue the same pricing variations based on currency will
 apply. In contrast, any scholarly publishing system that involves local
 payments (e.g. hosting of local journals, paying local copyeditors and
 proofreaders) has the advantage of relative pricing stability that comes
 with paying in the local currency.

  Also on Sustaining the Knowledge Commons today: does the market economy
 really work for social reality? Reflections on an interview with David
 Simon by Alexis Calvé-Genest.

 http://sustainingknowledgecommons.org/2015/05/13/market-economy-and-social-reality-a-pragmatic-view-from-a-well-known-author/

  best,

--
 Dr. Heather Morrison
 Assistant Professor
 École des sciences de l'information / School of Information Studies
 University of Ottawa
 Desmarais 111-02
 613-562-5800 ext. 7634
 Sustaining the Knowledge Commons: Open Access Scholarship
 http://sustainingknowledgecommons.org/
 http://www.sis.uottawa.ca/faculty/hmorrison.html
 heather.morri...@uottawa.ca



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[GOAL] Re: Sharing and reuse - not within a commercial economy, but within a sharing economy

2015-04-13 Thread Michael Eisen
That's a lovely sentiment Jeffrey, except for the part about copyright
incentivizing publishers to make work available. It does just the opposite.
It provides them a clear incentive to restrict access to the work so that
they can compel people who need access to pay.

On Monday, April 13, 2015, Beall, Jeffrey jeffrey.be...@ucdenver.edu
wrote:

 Regarding this ongoing discussion about Creative Commons licenses and
 scholarly publishers, I think it is fair to conclude the following:

 1. There is much disagreement about what the licenses mean, how they can
 be interpreted, and how they are applied in real-world situations

 2. The licenses are not as simple as advertised. In fact, they are complex
 legal documents subject to expert interpretation, and they lead to ongoing
 contentiousness and debate, even among experts.

 3. There is beauty in the simplicity of copyright, that is, transferring
 one's copyright to a publisher. It is binary. The terms are clear. The
 publisher employs professionals that expertly manage the copyright. Owning
 the copyright incentives the publisher to make the work available and
 preserve it over time.

 I just had an article accepted recently, and last week I turned in a form
 transferring copyright to the publisher, something I was happy to do. There
 is nothing wrong with this. It's my choice. The paper will eventually
 appear in J-STOR and will be preserved.

 My transaction was easy to understand, unambiguous, and clear. Let's
 remember that transferring copyright to a high quality publisher is still a
 valid option and for many authors may be the best option.

 Jeffrey Beall, MA, MSLS, Associate Professor
 Scholarly Communications Librarian
 Auraria Library
 University of Colorado Denver
 1100 Lawrence St.
 Denver, Colo.  80204 USA
 (303) 556-5936
 jeffrey.be...@ucdenver.edu javascript:;



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[GOAL] Re: GOAL] Re: Don't Conflate OA with Peer-Review Reform

2013-12-12 Thread Michael Eisen
Open access and peer review reform are not necessarily related in that you
can have OA without peer review changes (e.g. PLOS Biology) and have peer
review changes without open access. However, in practical terms it makes
sense to discuss them both in the same place because they are both
inhibited by the extreme stasis in conventional publishing, and because
most of the efforts to innovate in peer review are coming from open access
journals (e.g. F1000 Research).

I also find it highly ironic that Jeffrey Beall would complain about tone
after he just published an article that went to great lengths to slander
everyone ever connected with the open access movement.




On Thu, Dec 12, 2013 at 2:59 AM, Graham Triggs grahamtri...@gmail.comwrote:

 On 11 December 2013 20:13, Bosman, J.M. j.bos...@uu.nl wrote:

  Let me be clear on this. My suggestion to move the discussion on peer
 review to another list has nothing to do with agreeing or not agreeing with
 anyone. It has to do with the degree to which peer review is related to
 Open Access. Even with zero open access peer review would reach its limits
 and needs to change. I think peer review discussions are more fruitful in a
 forum that focusses on innnovations in scholarly communication rather than
 just open access, although of course some lines that converge and
 intersect.


 Well, at the risk of putting words into the mouths of others, I find it
 hard to believe that there is anyone - even advocates of traditional
 publishing - who thinks it is a good idea to deny access to the outputs of
 quality research.

 Two highly substantive issues about open access are cost and credibility.
 Closed access publishing is not immune to the potential flaws in peer
 review, but open access can provide more opportunity and incentive to
 leverage flawed peer review.

 Whilst the major [open access] publishers have maintained a commitment to
 honest peer review, the same can't be said of every operating publisher.

 This list may not be the appropriate place for an in-depth discussion
 about changing the peer review process. But assuring the credibility of
 open access - in particular open access publishing - is inextricably linked
 to peer review, and how it is conducted. And a discussion of any changes
 would also impact on how much open access [publishing] costs, and how it is
 funded.

 On that basis, it would be impractical to consider peer review as off
 topic for an open access list - but any discussion would also need to
 recognise that there is a larger audience that needs to be involved (but
 then that is true of any list that people choose to subscribe to,
 regardless of it's scope).

 G

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[GOAL] Re: My last post on the Cherubim/Seraphim issue (promise!)

2013-05-03 Thread Michael Eisen
Back in 2002 when the debates about Gold vs. Green OA began, I and other
advocates for developing Gold OA publishing argued that the friendly stance
of publishers like Elsevier to self-archiving was a transient state, and
that as soon as people started to make appreciable numbers of papers
available in IRs - thereby actually threatening publisher revenues -
publishers would change their tune. And this is exactly what we're seeing
with Elsevier. Yes, their policies now are confusing, but I suspect they
won't be for long, and that we'll soon see explicit policies that require
embargoes.

The proper response on the part of instituions is not to sign agreements
with Elsevier and other publishers allowing embargoes, but to set a clear
mandate for OA with no embargoes. Publishers will have to live with our
terms, rather than continuing to demand that we live with theirs.


On Fri, May 3, 2013 at 6:08 AM, brent...@ulg.ac.be wrote:

 Elsevier's policy is now clear:
 *Accepted author manuscripts 
 (AAM)http://www.elsevier.com/about/open-access/open-access-policies/article-posting-policy#accepted-author-manuscript
 *: Immediate posting and dissemination of AAM’s is allowed to personal
 websites, to institutional repositories, or to arXiv. However, if your
 institution has an open access policy or mandate that requires you to post,
 Elsevier requires an agreement to be in place which respects the
 journal-specific embargo periods. Click 
 herehttp://cdn.elsevier.com/assets/pdf_file/0018/121293/external-embargo-list.pdf
  for
 a list of journal specific embargo periods (PDF) and see our funding body
 agreementshttp://www.elsevier.com/about/open-access/open-access-policies/funding-body-agreements
  for
 more details.

 Le 3 mai 2013 à 14:17, Stevan Harnad har...@ecs.soton.ac.uk a écrit :


 On 2013-05-03, at 5:02 AM, Andras Holl h...@konkoly.hu wrote:

 Though this be madness, yet there is method in it. I think that could be
 said on Elsevier's OA
 policy, because of two reasons. Firstly, it quite effectively hinders OA.
 Secondly, however badly
 constructed this OA policy is, one can see that from a publisher's
 perspective, mandates like the

 NIH mandate are threatening. As a side effect, other mandates - which
 would cover only a tiny

 fraction of the articles, and does not designate a single target
 repository are also affected,

 regardless that these hardly affect any publishers' profits.


 Andras,

 You are right that the pseudo-legal hedging is a pain.

 But in point of fact, Elsevier is still just as Green on paper as Springer
 is,
 once one realizes that one can ignore all their hedging.

 It is clear that Elsevier wants to hold onto the good PR it gains them to
 be
 perceived as Green. That's why they have not, in fact, revoked their
 policy since it was adopted in 
 2004http://users.ecs.soton.ac.uk/harnad/Hypermail/Amsci/index.html#msg3771.
 They have a terrible image problem,
 on all fronts, and this is their only positive face.

 But it's not just psychology or strategy: *The Elsevier policy really does
 *
 *mean that all Elsevier authors retain their right to provide Green OA,*
 *unembargoed. *

 Yes, it's a nuisance that Elsevier hedges this with pseudo-legal FUD,
 but our job is to make it clear to authors, institutions and funders that
 the Elsevier policy does, indeed, formally allow immediate, unembargoed
 OA, exactly as Springer policy does, and that the Elsevier hedging is
 empty and can be completely ignored.

 The real problem here is not Elsevier's double talk: It is *the gratuitous
 *
 *boost that the credibility of Elsevier's hedging has received from the*
 *breath-takingly fatuous and counterproductive Finch/RCUK policy* and its
 flow-charts (which Elsevier has eagerly included in its rights
 documentation).

 For Elsevier has now got a new positive face that it can use for PR:
 Elsevier is fully *RCUK-compliant*.

 Please add this to the growing list of the perverse effects of
 Finch/RCUK...

 But rest assured that (1) the RCUK's own forced back-pedalling, grudgingly
 admitting that Green is just as RCUK-compliant as Gold, together with
 (2) HEFCE/RCUK's timely proposal to mandate immediate-deposit as the
 precondition for submitting a paper for REF 2020 undoes most of the
 damage done by the Finch Report.

 Stevan

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[GOAL] Re: Is CC-BY analogous to toll access?

2013-03-14 Thread Michael Eisen
This is one of the most ludicrous arguments I have ever heard. I requires
mental gymnastics of an absurd kind to equate a system in which people use
copyright to heavily restrict content to a system in which works are freely
available in perpetuity. If people can build services built on top of the
literature and people want to pay for them, even when the underlying
content is freely available, that is the definition of added value, and is
in no way comparable to a system in which the underlying content is private
property.

On Thu, Mar 14, 2013 at 9:57 AM, Heather Morrison hgmor...@sfu.ca wrote:

 A problem with CC-BY: permitting downstream use with no strings attached
 is the toll access model

 The Creative Commons - Attribution (CC-BY) only license grants blanket
 permission rights for commercial use to any third party downstream.
 Proponents of CC-BY argue that this will open up the possibility for new
 commercial services to serve scholarship. This may or may not be; this is a
 speculative argument at this point. However, if this happens, this opens up
 the possibility that these new services will be made available on a toll
 access basis, because none of the CC-BY licenses is specific to works that
 are free of charge.

 This is very similar to the current model for dissemination of
 scholarship. Scholarly research is largely funded by the public, whether
 through research grants or university salaries. Scholars must make their
 work public (publish) in order to continue to receive grants, retain their
 jobs and advance in their careers. They give away their work to publishers
 with no strings attached, often signing away all copyright. A few
 publishers have taken advantage of this system to lock up scholarship for
 their private profit.

 One potential outcome of a CC-BY default for scholarship is a next
 generation of Elsevier-like toll access services. Many scholars and the
 public whose work was given away through CC-BY could be unable to afford
 the latest and best services made possible by their contributions. This is
 just one of the reasons to give serious thought to this matter before
 recommending a CC-BY default. For more, please see my Creative Commons and
 open access critique series.

 Thanks to Heather Piwowar for posting an opposing view on google g+ that
 helped me to work through this argument.

 from:

 http://poeticeconomics.blogspot.ca/2013/03/a-problem-with-cc-by-permitting.html

 best,

 Heather Morrison, PhD
 The Imaginary Journal of Poetic Economics
 http://poeticeconomics.blogspot.com



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[GOAL] 20 years of cowardice: the pathetic response of American universities to the crisis in scholarly publishing

2012-05-01 Thread Michael Eisen
from my blog: http://www.michaeleisen.org/blog/?p=105820 years of
cowardice: the pathetic response of American universities to the crisis in
scholarly publishing
By Michael Eisen http://www.michaeleisen.org/blog/?author=1 | May 1, 2012

When Harvard University says it can not afford something, people notice. So
it was last month when a faculty committee examining the future of the
university?s libraries declared that the continued growth of
journal subscription fees was unsustainable, even for them. The
accompanying calls for faculty action are being hailed as a major challenge
to the traditional publishers of scholarly journals.

Would that it were so. Rather than being a watershed event in the movement
to reform scholarly publishing, the tepidness of the committee?s
recommendations http://www.michaeleisen.org/blog/?p=1052, and the silence
of the university?s administration http://www.harvard.edu/, are just the
latest manifestation of the toothless response of American universities to
the ?serials crisis? that has plagued libraries for decades.

Had the leaders major research universities attacked this issue head on
when the deep economic flaws in system became apparent, or if they?d showed
even an ounce of spine in the ensuing twenty or so years, the
subscription-based model that is the root of the problem would have long
ago been eliminated. The solutions have always been clear. Universities
should have stopped paying for subscriptions, forcing publishers to adopt
alternative economic models. And they should have started to reshape the
criteria for hiring, promotion and tenure, so that current and aspiring
faculty did not feel compelled to publish in journals that were bankrupting
the system. But they did neither, choosing instead to let the problem
fester. And even as cries from the library community intensify, our
universities continue to shovel billions of dollars a year to publishers
while they repeatedly fail to take the simple steps that could fix the
problem overnight.

*The roots of the serials crisis *

Virtually all of the problems in scholarly publishing stem from the simple
act, repeated millions of times a year, of a scholar signing over copyright
in their work to the journal in which their work is to appear. When they do
this they hand publishers a weapon that enables them to extract almost
unlimited amounts of money from libraries at the same research institutions
that produced the work in the first place.

The problem arises because research libraries are charged with obtaining
for scholars at their institution access to the entire scholarly output of
their colleagues. Not just the most important stuff. Not just the most
interesting stuff. Not just the most affordable stuff. ALL OF IT. And
publishers know this. So they raise prices on their existing journals. And
they launch new titles. And then they raise *their* prices.

What can libraries do? They have to subscribe to these journals. Their
clientele wants them ? indeed, they need them to do their work. They can?t
cancel their subscription to Journal X in favor of the cheaper Journal Y,
because the contents of X are only available in X. Every publisher is a
monopoly selling an essential commodity. No wonder things have gotten out
of control.

And out of control they are. Expenditures on scholarly journals at American
research libraries
quadrupledhttp://www.arl.org/bm~doc/arlbr249serials.pdf from
1986 to 2005, increasing at over three times the rate of inflation. This
despite a massive reduction in costs due to a major shift towards
electronic dissemination. These rates of growth continue nearly unabated,
even in a terrible economy. (For those interested in more details, I point
you to SPARC http://www.arl.org/sparc/index.shtml, the Scholarly
Publishing and Academic Resources Coalition, who tracks journal pricing and
revenues).

*The opportunity universities missed*

**Just as the serials crisis was hitting its stride in the mid-1990?s, fate
handed universities an out ? the internet. In the early 1990?s access to
the scholarly literature almost always occurred via print journals. By the
end of the decade, virtually all scholarly journals were publishing online.

This radical transformation in how scholarly works were disseminated should
have been accompanied by a corresponding radical shift in the economics of
journal publishing. But it barely made a dent. Publishers, who were now
primarily shipping electrons instead of ink on paper, kept raising their
subscription prices as if nothing had happened. And universities let them
get away with it.

By failing to show even a hint of creativity or initiative in seizing the
opportunity presented by the internet to reshape the system of scholarly
communication in a productive way, the leaders of American universities
condemned themselves to 15 more years (and counting) of rising costs, and
decreasing value. Their inaction also cost them the chance to reclaim the
primary role they once held

[GOAL] Re: 20 years of cowardice: the pathetic response of American universities to the crisis in scholarly publishing

2012-05-01 Thread Michael Eisen
Steve-

I'm not sure what you're taking with. I agree that universities should take
control of their own scholarly content. But are you trying to argue that
they have done this? Because I don't view setting up an IR to hold material
published in subscription journals as taking ownership of the process -
rather it's attempting to have it both ways without actually challenging
the system in any meaningful way.

-Mike

On Tue, May 1, 2012 at 9:06 AM, Steve Hitchcock sh94r at ecs.soton.ac.ukwrote:

 A perspective spanning 20 years on this topic that fails to mention
 repositories hardly begins to tackle the issues or the problems.

 If we go back 20 years to 1992 we had arXiv, a repository, but barely any
 e-journals (although most e-journals then were free).

 Some journals that followed were called 'overlay' journals, because they
 effectively overlaid peer review on top of arXiv. The problems they solved
 were:

 1 access to peer reviewed electronic content (when there were few peer
 reviewed journals available electronically)
 2 low costs for peer reviewed content

 These original overlay journals were so successful they later became
 subscription journals (mainly because they also began to overlay
 conventional journal production costs on top of peer review). There were
 few imitators subsequently because the two problems were effectively solved
 c. 2000 by the mass switch to electronic journals, and the emergence of IRs
 and green OA journals.

 This polemic is trying to solve the same problems, but the solutions from
 the last 20 years are still in place, and it ignores them.

 The response of many universities has been pathetic, but not for the
 reasons suggested, and if the problem being addressed is costs rather than
 access, then the proposals here, to forcibly switch journals to gold OA,
 risks making the access problem worse and raising total costs higher than
 is achievable with IRs. It is not enough simply to talk with publishers
 about reallocation of charges.

 Instead institutions should be investing in and promoting local published
 content, ensuring it is made open access to the world locally; also making
 the inevitable connection between institutional repositories and research
 data linked to publications, before that too becomes subject to outside
 control and cost escalation.

 We can agree that we don't want it to take 15 more years for open access
 to become the norm.

 Steve Hitchcock
 WAIS Group, Building 32
 School of Electronics and Computer Science
 University of Southampton, SO17 1BJ, UK
 Email: sh94r at ecs.soton.ac.uk
 Twitter: http://twitter.com/stevehit
 Connotea: http://www.connotea.org/user/stevehit
 Tel: +44 (0)23 8059 9379Fax: +44 (0)23 8059 9379

 On 1 May 2012, at 15:30, Michael Eisen wrote:

  from my blog: http://www.michaeleisen.org/blog/?p=1058
  20 years of cowardice: the pathetic response of American universities to
 the crisis in scholarly publishing
  By Michael Eisen | May 1, 2012
  When Harvard University says it can not afford something, people notice.
 So it was last month when a faculty committee examining the future of the
 university?s libraries declared that the continued growth of journal
 subscription fees was unsustainable, even for them. The accompanying calls
 for faculty action are being hailed as a major challenge to the traditional
 publishers of scholarly journals.
 
  Would that it were so. Rather than being a watershed event in the
 movement to reform scholarly publishing, the tepidness of the committee?s
 recommendations, and the silence of the university?s administration, are
 just the latest manifestation of the toothless response of American
 universities to the ?serials crisis? that has plagued libraries for decades.
 
  Had the leaders major research universities attacked this issue head on
 when the deep economic flaws in system became apparent, or if they?d showed
 even an ounce of spine in the ensuing twenty or so years, the
 subscription-based model that is the root of the problem would have long
 ago been eliminated. The solutions have always been clear. Universities
 should have stopped paying for subscriptions, forcing publishers to adopt
 alternative economic models. And they should have started to reshape the
 criteria for hiring, promotion and tenure, so that current and aspiring
 faculty did not feel compelled to publish in journals that were bankrupting
 the system. But they did neither, choosing instead to let the problem
 fester. And even as cries from the library community intensify, our
 universities continue to shovel billions of dollars a year to publishers
 while they repeatedly fail to take the simple steps that could fix the
 problem overnight.
 
  The roots of the serials crisis
 
  Virtually all of the problems in scholarly publishing stem from the
 simple act, repeated millions of times a year, of a scholar signing over
 copyright in their work to the journal in which their work is to appear.
 When they do

[GOAL] Re: 20 years of cowardice: the pathetic response of American universities to the crisis in scholarly publishing

2012-05-01 Thread Michael Eisen
I did mention it briefly, saying Their inaction also cost them the chance
to reclaim the primary role they once held (through their university
presses) in communicating the output of their scholars.

But, look, not every thing anyone writes about scholarly publishing can
touch on every aspect of the problem and possible solutions. I was
responding to the ridiculous accolades being given to Harvard for their
latest challenge to publishers. Their complaint was about the rising cost
of journals, and I wanted to point out that they're facing this problem
because they've never tried to deal with it. This rising cost of journals
is, obviously, related to, but not identical to, the problem of providing
access to a university's scholarly output. This is another area where the
university's response has been woefully inadequate, but it was not the
subject of my post.





On Tue, May 1, 2012 at 11:14 AM, Steve Hitchcock sh94r at 
ecs.soton.ac.ukwrote:

  I agree that universities should take control of their own scholarly
 content.

 Mike,   Where does your article say this? How are you proposing they do
 this? Perhaps this was not an angle you wanted to cover in this article,
 but hard to ignore in a 20 year view.

 Repositories were not attempting to 'challenge' the system, but to solve
 the access problem, by working with and extending the system. They do that,
 for people who use repositories.

 Nor are repositories trying to take 'ownership' of the process, although
 the more content they can provide the more of a stake they have in
 continuing the process towards more access.

 These sound like terms used when someone wants to solve a problem by first
 replacing the incumbents, rather than someone who first wants to solve the
 problem.

 Steve

 On 1 May 2012, at 17:34, Michael Eisen wrote:

  Steve-
 
  I'm not sure what you're taking with. I agree that universities should
 take control of their own scholarly content. But are you trying to argue
 that they have done this? Because I don't view setting up an IR to hold
 material published in subscription journals as taking ownership of the
 process - rather it's attempting to have it both ways without actually
 challenging the system in any meaningful way.
 
  -Mike
 
  On Tue, May 1, 2012 at 9:06 AM, Steve Hitchcock sh94r at ecs.soton.ac.uk
 wrote:
  A perspective spanning 20 years on this topic that fails to mention
 repositories hardly begins to tackle the issues or the problems.
 
  If we go back 20 years to 1992 we had arXiv, a repository, but barely
 any e-journals (although most e-journals then were free).
 
  Some journals that followed were called 'overlay' journals, because they
 effectively overlaid peer review on top of arXiv. The problems they solved
 were:
 
  1 access to peer reviewed electronic content (when there were few peer
 reviewed journals available electronically)
  2 low costs for peer reviewed content
 
  These original overlay journals were so successful they later became
 subscription journals (mainly because they also began to overlay
 conventional journal production costs on top of peer review). There were
 few imitators subsequently because the two problems were effectively solved
 c. 2000 by the mass switch to electronic journals, and the emergence of IRs
 and green OA journals.
 
  This polemic is trying to solve the same problems, but the solutions
 from the last 20 years are still in place, and it ignores them.
 
  The response of many universities has been pathetic, but not for the
 reasons suggested, and if the problem being addressed is costs rather than
 access, then the proposals here, to forcibly switch journals to gold OA,
 risks making the access problem worse and raising total costs higher than
 is achievable with IRs. It is not enough simply to talk with publishers
 about reallocation of charges.
 
  Instead institutions should be investing in and promoting local
 published content, ensuring it is made open access to the world locally;
 also making the inevitable connection between institutional repositories
 and research data linked to publications, before that too becomes subject
 to outside control and cost escalation.
 
  We can agree that we don't want it to take 15 more years for open access
 to become the norm.
 
  Steve Hitchcock
  WAIS Group, Building 32
  School of Electronics and Computer Science
  University of Southampton, SO17 1BJ, UK
  Email: sh94r at ecs.soton.ac.uk
  Twitter: http://twitter.com/stevehit
  Connotea: http://www.connotea.org/user/stevehit
  Tel: +44 (0)23 8059 9379Fax: +44 (0)23 8059 9379
 
  On 1 May 2012, at 15:30, Michael Eisen wrote:
 
   from my blog: http://www.michaeleisen.org/blog/?p=1058
   20 years of cowardice: the pathetic response of American universities
 to the crisis in scholarly publishing
   By Michael Eisen | May 1, 2012
   When Harvard University says it can not afford something, people
 notice. So it was last month when a faculty committee examining the future

[GOAL] 20 years of cowardice: the pathetic response of American universities to the crisis in scholarly publishing

2012-05-01 Thread Michael Eisen
from my blog: http://www.michaeleisen.org/blog/?p=1058

  20 years of cowardice: the pathetic response of American universities to the
 crisis in scholarly publishing

By Michael Eisen | May 1, 2012

When Harvard University says it can not afford something, people notice. So it
was last month when a faculty committee examining the future of the 
university’s
libraries declared that the continued growth of journal subscription fees was
unsustainable, even for them. The accompanying calls for faculty action are
being hailed as a major challenge to the traditional publishers of scholarly
journals.

Would that it were so. Rather than being a watershed event in the movement to
reform scholarly publishing, the tepidness of the committee’s 
recommendations,
and the silence of the university’s administration, are just the latest
manifestation of the toothless response of American universities to the 
“serials
crisis” that has plagued libraries for decades.

Had the leaders major research universities attacked this issue head on when the
deep economic flaws in system became apparent, or if they’d showed even an 
ounce
of spine in the ensuing twenty or so years, the subscription-based model that is
the root of the problem would have long ago been eliminated. The solutions have
always been clear. Universities should have stopped paying for subscriptions,
forcing publishers to adopt alternative economic models. And they should have
started to reshape the criteria for hiring, promotion and tenure, so that
current and aspiring faculty did not feel compelled to publish in journals that
were bankrupting the system. But they did neither, choosing instead to let the
problem fester. And even as cries from the library community intensify, our
universities continue to shovel billions of dollars a year to publishers while
they repeatedly fail to take the simple steps that could fix the problem
overnight.

The roots of the serials crisis 

Virtually all of the problems in scholarly publishing stem from the simple act,
repeated millions of times a year, of a scholar signing over copyright in their
work to the journal in which their work is to appear. When they do this they
hand publishers a weapon that enables them to extract almost unlimited amounts
of money from libraries at the same research institutions that produced the work
in the first place.

The problem arises because research libraries are charged with obtaining for
scholars at their institution access to the entire scholarly output of their
colleagues. Not just the most important stuff. Not just the most interesting
stuff. Not just the most affordable stuff. ALL OF IT. And publishers know this.
So they raise prices on their existing journals. And they launch new titles. And
then they raise their prices.

What can libraries do? They have to subscribe to these journals. Their clientele
wants them – indeed, they need them to do their work. They can’t cancel 
their
subscription to Journal X in favor of the cheaper Journal Y, because the
contents of X are only available in X. Every publisher is a monopoly selling an
essential commodity. No wonder things have gotten out of control.

And out of control they are. Expenditures on scholarly journals at American
research libraries quadrupled from 1986 to 2005, increasing at over three 
times
the rate of inflation. This despite a massive reduction in costs due to a major
shift towards electronic dissemination. These rates of growth continue nearly
unabated, even in a terrible economy. (For those interested in more details, I
point you to SPARC, the Scholarly Publishing and Academic Resources Coalition,
who tracks journal pricing and revenues).

The opportunity universities missed

Just as the serials crisis was hitting its stride in the mid-1990′s, fate 
handed
universities an out – the internet. In the early 1990′s access to the 
scholarly
literature almost always occurred via print journals. By the end of the decade,
virtually all scholarly journals were publishing online.

This radical transformation in how scholarly works were disseminated should have
been accompanied by a corresponding radical shift in the economics of journal
publishing. But it barely made a dent. Publishers, who were now primarily
shipping electrons instead of ink on paper, kept raising their subscription
prices as if nothing had happened. And universities let them get away with it.

By failing to show even a hint of creativity or initiative in seizing the
opportunity presented by the internet to reshape the system of scholarly
communication in a productive way, the leaders of American universities
condemned themselves to 15 more years (and counting) of rising costs, and
decreasing value. Their inaction also cost them the chance to reclaim the
primary role they once held (through their university presses) in communicating
the output of their scholars.

But while universities did 

[GOAL] Re: 20 years of cowardice: the pathetic response of American universities to the crisis in scholarly publishing

2012-05-01 Thread Michael Eisen
I did mention it briefly, saying Their inaction also cost them the chance to
reclaim the primary role they once held (through their university presses) in
communicating the output of their scholars.
But, look, not every thing anyone writes about scholarly publishing can touch on
every aspect of the problem and possible solutions. I was responding to the
ridiculous accolades being given to Harvard for their latest challenge to
publishers. Their complaint was about the rising cost of journals, and I wanted
to point out that they're facing this problem because they've never tried to
deal with it. This rising cost of journals is, obviously, related to, but not
identical to, the problem of providing access to a university's scholarly
output. This is another area where the university's response has been woefully
inadequate, but it was not the subject of my post.





On Tue, May 1, 2012 at 11:14 AM, Steve Hitchcock sh...@ecs.soton.ac.uk wrote:
   I agree that universities should take control of their own
  scholarly content.

Mike,   Where does your article say this? How are you proposing they do
this? Perhaps this was not an angle you wanted to cover in this article,
but hard to ignore in a 20 year view.

Repositories were not attempting to 'challenge' the system, but to solve
the access problem, by working with and extending the system. They do
that, for people who use repositories.

Nor are repositories trying to take 'ownership' of the process, although
the more content they can provide the more of a stake they have in
continuing the process towards more access.

These sound like terms used when someone wants to solve a problem by first
replacing the incumbents, rather than someone who first wants to solve the
problem.

Steve

On 1 May 2012, at 17:34, Michael Eisen wrote:

 Steve-

 I'm not sure what you're taking with. I agree that universities should
take control of their own scholarly content. But are you trying to argue
that they have done this? Because I don't view setting up an IR to hold
material published in subscription journals as taking ownership of the
process - rather it's attempting to have it both ways without actually
challenging the system in any meaningful way.

 -Mike

 On Tue, May 1, 2012 at 9:06 AM, Steve Hitchcock sh...@ecs.soton.ac.uk
wrote:
 A perspective spanning 20 years on this topic that fails to mention
repositories hardly begins to tackle the issues or the problems.

 If we go back 20 years to 1992 we had arXiv, a repository, but barely
any e-journals (although most e-journals then were free).

 Some journals that followed were called 'overlay' journals, because they
effectively overlaid peer review on top of arXiv. The problems they solved
were:

 1 access to peer reviewed electronic content (when there were few peer
reviewed journals available electronically)
 2 low costs for peer reviewed content

 These original overlay journals were so successful they later became
subscription journals (mainly because they also began to overlay
conventional journal production costs on top of peer review). There were
few imitators subsequently because the two problems were effectively
solved c. 2000 by the mass switch to electronic journals, and the
emergence of IRs and green OA journals.

 This polemic is trying to solve the same problems, but the solutions
from the last 20 years are still in place, and it ignores them.

 The response of many universities has been pathetic, but not for the
reasons suggested, and if the problem being addressed is costs rather than
access, then the proposals here, to forcibly switch journals to gold OA,
risks making the access problem worse and raising total costs higher than
is achievable with IRs. It is not enough simply to talk with publishers
about reallocation of charges.

 Instead institutions should be investing in and promoting local
published content, ensuring it is made open access to the world locally;
also making the inevitable connection between institutional repositories
and research data linked to publications, before that too becomes subject
to outside control and cost escalation.

 We can agree that we don't want it to take 15 more years for open access
to become the norm.

 Steve Hitchcock
 WAIS Group, Building 32
 School of Electronics and Computer Science
 University of Southampton, SO17 1BJ, UK
 Email: sh...@ecs.soton.ac.uk
 Twitter: http://twitter.com/stevehit
 Connotea: http://www.connotea.org/user/stevehit
 Tel: +44 (0)23 8059 9379    Fax: +44 (0)23 8059 9379

 On 1 May 2012, at 15:30, Michael Eisen wrote:

  from my blog: http://www.michaeleisen.org/blog/?p=1058
  20 years of cowardice: the pathetic response of American universities
to the crisis in scholarly publishing
  By Michael Eisen | May 1, 2012
  When Harvard University says it can not afford something, people
notice. So it was last month when a faculty committee examining the future
of the university’s libraries declared that the continued growth of
journal

[GOAL] Re: OA and NIH public access compliance and enforcement?

2012-04-25 Thread Michael Eisen
The NIH enforces the policy by requiring a PMC ID on every paper submitted with
grant progress reports and renewals. It's actually fairly effective. 

On Mon, Apr 23, 2012 at 8:02 PM, Stevan Harnad har...@ecs.soton.ac.uk wrote:
  Hard to imagine how fundee compliance with NIH OA policy can be
  effectively enforced while:

  (1) Deposit can be done by either the fundee or the publisher
  (who is not bound by the grant's conditions)

  (2) Deposit must by directly in PubMed Central instead
  of the fundee's institutional repository (where the institution
  can monitor publication output and ensure compliance)

  Unlike the institution (which monitors its researchers'
  publication output and productivity) the funder is unaware
  of what and where papers are published, especially after
  peer review is done and the researcher is funded. (Final
  Reports come far too late.)

  Hence the natural enforcer for funder policy is of course the
  fundee's institution, which already casts an eager eagle eye
  on all phases of the all-important research application and
  funding process (because of a shared institutional interest
  in getting research funding).

  The publisher, in contrast, has every interest in deterring or
  delaying OA as much as possible.

  The researcher, meanwhile, is busy writing grant applications
  and conducting research, if funded. Publish-or-perish ensures
  that researchers publish, but only institutions and institutional
  mandates can ensure that the publications are made OA
  (especially if institutional repository deposit is designated
  as the sole mechanism for submitting research for annual
  institutional performance review).

  See http://bit.ly/institutionalOA

  Stevan Harnad

  On 2012-04-23, at 8:03 PM, LIBLICENSE wrote:

   From: Hansen, Dave drhan...@email.unc.edu
   Date: Mon, 23 Apr 2012 21:28:06 +
  
   Does anyone on this list have an idea of how the NIH enforces its
   public access policy? I recently had a conversation with someone
  who
   has viewed several NIH non-compliance letters. She expressed some
   consternation that, while letters sometimes go out about
   non-compliance, there is no real force behind them and nothing
  that
   effectively compels compliance. I couldn’t find any more info from
  the
   NIH itself.
  
   Does anyone have any idea how prevalent non-compliance is and how
   frequently NIH takes actions to enforce the policy, and for those
   library lawyers that I know lurk around on this list, who (if
  anyone)
   would be able to contest non-enforcement by the NIH?*
  
   *I’m not trying to pick a fight. I’d just like to know who has the
   right to do such a thing.
  
   -
  
   David R. Hansen
   Digital Library Fellow
   Samuelson Law, Technology  Public Policy Clinic
   UC Berkeley School of Law
   dhan...@law.berkeley.edu
   (510) 643-8138


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--
Michael Eisen, Ph.D.
Investigator, Howard Hughes Medical Institute
Associate Professor, Department of Molecular and Cell Biology
University of California, Berkeley




[ Part 2: Attached Text ]

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[GOAL] op-ed on Research Works Act in today's NYT

2012-01-10 Thread Michael Eisen
I have an op-ed in today's NYT about the Research Works Act
http://www.nytimes.com/2012/01/11/opinion/research-bought-then-paid-for.html

-- 
Michael Eisen, Ph.D.
Investigator, Howard Hughes Medical Institute
Associate Professor, Department of Molecular and Cell Biology
University of California, Berkeley



[ Part 2: Attached Text ]

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Re: [sparc-advocacy] Re: [BOAI] Call to action: 2011 White House RFI on public access (deadline Jan. 2)

2011-11-22 Thread Michael Eisen
Daureen-
You're missing the point. Under the current model members of the public who want
to access a paper are paying for THE PAPER twice. They are heavily subsidizing
the subscriptions that pay for journals - providing far more than the cost of
publishing through indirect costs and other means. And then they're paying again
to access the article themselves.

And (putting aside the fact that Tang was NOT developed by NASA), It's as if
NASA had paid $100,000,000 to General Foods to produce an infinite supply of
Tang for the use of its astronauts, and then Tang charged $40/glass to the
general public to get some for themselves. One can understand why GF might try
to do that, but it's an insane deal from the public's perspective.

-Mikw


On Mon, Nov 21, 2011 at 11:00 AM, Daureen Nesdill daureen.nesd...@utah.edu
wrote:
  Actually they probably pay for it multiple times since the taxpayers
  use the products of research. Should all the products that came out
  of the space program be free - e.g. Tang, velcro?  Should all
  results of medical research partially funded by taxpayers be free
  (that would be a billing nightmare)?

  Daureen Nesdill
  U of Utah
  
  From: Andras Holl [h...@konkoly.hu]
  Sent: Friday, November 18, 2011 9:17 AM
  To: boai-fo...@ecs.soton.ac.uk; SPARC Open Access Forum; American
  Scientist Open Access Forum; scholc...@ala.org; sparc...@arl.org;
  sparc...@arl.org; sparc-arfo...@arl.org; sparc-opend...@arl.org;
  Carter, Janet
  Subject: [sparc-advocacy] Re: [BOAI] Call to action: 2011 White
  House RFI on public access (deadline Jan. 2)

  Dear All,

  
   Taxpayers paid for the research. We deserve to be able to access
  the results.
  
   The main point to emphasize is that taxpayers are entitled to
  access the results of the research our tax dollars fund. Taxpayers
  should be allowed to immediately access and fully reuse the results
  of publicly funded research.

  I would put it differently. The taxpayers should be allowed access,
  but most of them would not be interested.
  But with toll access, taxpayers actually pay for the research twice.
  Once when it is done, and once again when
  other researchers, funded by them as well, read it. So:

  Taxpayers paid for the research. They should not pay twice.

  Andras

---
  -
  Andras Holl / Holl Andras                 e-mail: h...@konkoly.hu
  Konkoly Observatory / MTA CsKI           Tel.: +36 1 3919368 Fax:
  +36 1 2754668
  IT manager / Szamitastechn. rendszervez. Mail: H1525 POBox 67,
  Budapest, Hungary
---
  -


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--
Michael Eisen, Ph.D.
Investigator, Howard Hughes Medical Institute
Associate Professor, Department of Molecular and Cell Biology
University of California, Berkeley




Re: Fool's Gold Journal Spam

2011-10-30 Thread Michael Eisen
/special-features.php

  Submit your article online at :
  http://www.editorialmanager.com/proteomics/

              (Or)
  As e-mail attachment to the Editorial Office
  :editor@omicsgroup.co

  We shall look forward to hear from you.

  Sincerely,

  Editors, Journal of Proteomics  Bioinformatics

  Dr. Chittibabu (Babu) Guda, University of Nebraska Medical Center,
  USA
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  Dr. Lifeng Peng, Victoria University, China
  Dr. Kazuyuki Nakamura, Yamaguchi University, Japan
  Dr. Mobeen Raja, University of Alberta, Canada
  Dr. Viola Calabró, University of Naples Federico II, ITALY
  Dr. Mario Hugo Genero, Universidad Austral, Republica Argentina
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  Dr. Yurong Lai, Groton Laboratory, Pfizer, Inc, UK

  Editorial office
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--
Michael Eisen, Ph.D.
Investigator, Howard Hughes Medical Institute
Associate Professor, Department of Molecular and Cell Biology
University of California, Berkeley




Re: Captured product vs. service

2010-02-21 Thread Michael Eisen
Yes - I agree with Paul. There's very little lost relative to the public domain
by going with the CCby license - it's what we chose long ago to use at PLoS.

But it's worth pointing out that the currency of non-commercial intellectual
work is citation, which is very different from the attribution protected by the
CCby license. Citation is an academic tradition, and the expectation that one
cites works they use applies to any published work, no matter the terms under
which it was distributed. For example, all works of US government employees have
been in the public domain for many decades. But - by tradition if not by law -
one still has to cite them when they are used.

The CCby license deals with something very different, requiring that, when the
work is reproduced, the original citation must be maintained in the copy. Since
normal academic referencing does not usually involve replication of the work,
this term is moot. 

Don't get me wrong - I'm not arguing against the use of the CCby license - this
is something I strongly advocate. But this is because I see the value in
maintaining attribution in a future world where papers are widely replicated,
repackaged, etc... - not because it has any real impact on the current academic
citation system. 


On Sun, Feb 21, 2010 at 4:44 PM, Uhlir, Paul puh...@nas.edu wrote:

  I was referring to the first license below, Les. It has very few
  restrictions. One could use the CC0 license, which dedicates the
  work to the public domain, but almost all scientists want
  attribution, since that is the currency of non-commercial
  intellectual work. This is why I would reject the pure public domain
  status of research publications that are the result of government
  funded research, as suggested by Michael Eisen. There are other
  reasons to treat the pure public domain option with scepticism, but
  that is the main one in my view.

  Paul




  -Original Message-
  From: American Scientist Open Access Forum on behalf of Leslie Carr
  Sent: Sun 2/21/2010 4:52 PM
  To: american-scientist-open-access-fo...@listserver.sigmaxi.org
  Subject:      Re: Captured product vs. service

On 21 Feb 2010, at 20:56, Uhlir, Paul wrote:
 In response to your last question, yes, if the article is made available
under an Attribution Only (ATT 3.0) Creative Commons license. This is
the recommended license for open access journals and is already broadly in
use. The advantage of this license is that it also allows various types of
automated knowledge discovery.

CC licenses are not without restrictions!

By Attribution Only do you mean
http://creativecommons.org/licenses/by/3.0/ or
http://creativecommons.org/licenses/by-nd/3.0/ ?
---
Les Carr





--
Michael Eisen, Ph.D.
Investigator, Howard Hughes Medical Institute
Associate Professor, Department of Molecular and Cell Biology
University of California, Berkeley



Re: Captured product vs. service

2010-02-20 Thread Michael Eisen
recipients do not take action on it or show it to anyone else, but
return this email to the sender and delete your copy of it

The STFC telecommunications systems may be monitored in accordance
with the policy available from
http://dlitd.dl.ac.uk/policy/monitoring/monitoring%20statement.htm
 .

---
---



--
Scanned by iCritical.






--
Michael Eisen, Ph.D.
Investigator, Howard Hughes Medical Institute
Associate Professor, Department of Molecular and Cell Biology
University of California, Berkeley




Re: What about delayed open access

2009-11-15 Thread Michael Eisen
While delayed free access is better than no free access, you suggest
that the question of whether delayed free access is better than
immediate free access is equivalent to asking whether each article
reading is equally valuable from society's viewpoint.

But this issue perfectly illustrates why delayed free access is far
less valuable - most accesses of most articles are made soon after
publication. For open access articles these early accesses are free -
for delayed free access articles tolls are collected (indeed, for most
publishers the delay is titrated to ensure that most accesses are
tolled). Thus, even if we accept that every reading is equivalently
valuable, delayed free access has substantially less value than
immediate open access.





2009/11/15  bj...@hanken.fi:
 Dear all regardless of your colour (gold or green)

 I've been following the recent debates on this forum with interest. Reminds
 me a bit about the schisms beteen the boljseviks and the mensjeviks at the
 beginning of the Russian revolution.

 In the current OA barometer project we're now in the final stages of our
 empirical work trying to establish what part of the 2008 peer reviewed
 article production is available as OA. Overall it seems the share available
 in journals and as e-copies is around equally big. What is particularly
 interesting is the split into different types of channels also inside gold
 and green. We will publish the results in due course but I would already now
 point out that we have found a perhaps surprisingly large amount of articles
 which have become OA on toll-gate publishers sites after a delay of 12
 months. Very often you can only find this out after trying out with more
 recent articles, since the publishers in question don't seem to advertise
 the delayed OA. It becomes particularly intriguing when the same publishers
 also practice Open choice for individual articles. Why pay if all articles
 become free after 12 months anyway?

 I think we should take note of this and accept delayed OA as a viable form
 of Open Access. What is in fact the difference between this and a repository
 copy posted after an embargo of 12 months.

 From a more philosophical viewpoint I would like to raise the issue of
 weather each article reading is equally valuable from society's viewpoint. A
 very important type of reading is where the reader find's an interesting
 citation and tries to retrieve the cited article. For this type of reading
 12 month delayed OA provides almost an equal service to full OA. And usually
 the chances are much higher that these readings influence the readers own
 research and that the article is read more carefully than the average
 current awareness reading where researchers quicly scan new articles in the
 journals they follow.

 Bo-Christer Björk




-- 
Michael Eisen, Ph.D.
Investigator, Howard Hughes Medical Institute
Associate Professor, Department of Molecular and Cell Biology
University of California, Berkeley


Re: Green Angels and OA Extremists

2008-12-02 Thread Michael Eisen
Les Carr wrote:


  HAVING SAID THAT, the library is in no way adverse to finding
  mechanisms that assist individuals and ease their tasks, and I guess
  that Elsevier can have no objections to that either! How about a
  notification email to be sent to authors of In Press papers that
  contains a Deposit this paper button that initiates the user's
  deposit workflow on the ScienceDirect Submitted Manuscript PDF.


You guys are such suckers. OF COURSE Elsevier can have objections to
libraries assisting individuals in self-archiving their work, because
Elsevier does not want self archiving to succeed! What do they have to
do to actually prove this to you? Stevan, Les and others seem to think
that Karen Hunter's recent email was some kind of bureaucratic error,
rather than realize it for what it clearly is - a direct statement
from Elsevier that they do not want self-archiving to actually take
off. It's a ploy (an apparently successful ploy) on their part to
diffuse moves towards effective universal open access by a) making
them seem like good guys and b) fostering the illusion that we can
have universal green OA without altering the economics of publishing.

And Stevan, rather than the typical retort about how green OA can be
achieved now, with a few keystrokes, can you please instead explain
how the policy statement from your friends at Elsevier does not
indicate that they are really opposed to real OA.


Re: AmSci Forum Netiquette

2008-11-21 Thread Michael Eisen
Is rabulistic a word?
On Nov 21, 2008, at 7:54 PM, Stevan Harnad wrote:

...you seems to use a rabulistic discussion
style... Do you think I am an idiot...


Fair warning: Further postings in this vein will not be
approved. This Forum is not for flaming. The messages will
either be kept courteous and nonpersonal, or they will not
appear.

Stevan Harnad
Moderator,
American Scientist Open Access Forum





Re: Call for a vote of nonconfidence in the moderator of the AmSci Forum

2008-10-07 Thread Michael Eisen
I disagree with Stevan often. He can be infuriating. He has a tendency to
bloviate.

Nonetheless - he has been a FANTASTIC moderator of this list. I have sent
off many posts that have criticized Stevan directly, and he has never failed
to send them to the group. I can think of no other list that has not just
lasted for 10 years, but kept up a high level of discourse and relevance.

Stevan has my complete confidence. The list would die without him.

On Oct 7, 2008, at 5:37 AM, Stevan Harnad wrote:

 On Tue, Oct 7, 2008 at 3:37 AM, c.oppenh...@lboro.ac.uk
 c.oppenh...@lboro.ac.uk wrote:
 
  I totally support Jean-Claude's view.
 
 I can only repeat what I said before:
 
 (1) I am happy to put an end to my 10-year moderatorship of the
 American Scientist Open Access Forum and hand it over to someone else
 who is willing to do it, but only if it is requested by a plurality of
 the membership, not if it is merely requested by a few dissatisfied
 members.
 
 (2) The moderator's role is to filter postings, approving the relevant
 ones, and rejecting the off-topic or ad-hominem ones.
 
 (3) Apart from that, the moderator has no special status or authority
 (other than what may accrue from the substance of his postings), and
 may post *exactly* as any other poster may post, including the posting
 of quotes, comments, critiques, elaborations, rebuttals *and
 summaries*.
 
 By my count, there have not been many votes one way or the other, but
 of the few votes there have been, more seem to be expressing
 confidence in my moderatorship than those that are calling for me to
 be replaced.
 
 I have also been accused of of censorship, by both Jean-Claude and
 Sally, the charge being subsequently rescinded. If there are doubts
 about whether I can be trusted to post or tally the votes -- or, more
 important, if we are to spare the Forum the bandwidth of votes
 appearing instead of OA substance -- I am also quite happy to direct
 the votes to be sent to a trusted 3rd party for tallying, if that is
 the wish of the Forum.
 
 Stevan Harnad
 
  
  Charles
  
  
  Professor Charles Oppenheim
  Head
  Department of Information Science
  Loughborough University
  Loughborough
  Leics LE11 3TU
  
  Tel 01509-223065
  Fax 01509 223053
  e mail c.oppenh...@lboro.ac.uk
  
  
  
  From: American Scientist Open Access Forum
  [mailto:american-scientist-open-access-fo...@listserver.sigmaxi.org] On
  Behalf Of Jean-Claude Guédon
  Sent: 06 October 2008 19:00
  To: american-scientist-open-access-fo...@listserver.sigmaxi.org
  Subject: Re: American Scientist Open Access Forum settings
  
  What I note is that my messages sometimes appear back very late and I
  wonder
  why. It is this detail which caused my recent angry  reaction.
  
  While we are on technical matters, I would appreciate two things from
  this
  moderator/actor:
  
  1. That he should refrain from ever summarizing somebody's words. We are
  all
  versed enough in the art of reading to be able to survive without this
  doubtful form of help. Besides, list moderators are not mentors or
  paternal
  figures. When the summary ends up distorting the original message, it
  becomes reprehensible;
  
  2. Since the moderator also intervenes as member in this list, he should
  make clear which of his interventions are moderating interventions and
  which
  ones are participations in discussions. In the latter case, summaries
  should
  be avoided.
  
  I realize that Peter Suber manages a blog and not a list, but I really
  like
  the way in which he carefully delineates the pieces of news he wants to
  convey, and how he announces his own comments. This is a very good model
  to
  follow. I would also add that Peter Suber refrains from using judgements
  and
  terms that occasionally raise the ire of readers such as me. When I read
  a
  sentence such as Many silly, mindless things have been standing in the
  way
  of the optimal and inevitable (Sept 28), I ask myself if the silly, and
  mindless  characterizations belong to this context. I also wonder
  whether
  the optimal and inevitable are objective, neutral terms. On Sept.
  30th, in
  answering to me, Stevan made free to add: What on earth does this
  mean?.
  Was that useful? In short, Stevan acts as if there was one truth, one
  defender of this truth (himself). The list is his list and, on it, he
  can
  berate people at will (What on earth does this mean?). And then if you
  resist and respond with a few equivalents to What on earth... etc.,
  then
  you are accused of flaming, being vituperative, or whatever.
  
  I wonder how the same individual, at will and arbitrarily, can assume
  the
  trappings of a moderator or a debate without even making sure that
  people
  know which role is at work. It troubles me and, I assume, it should
  trouble
  many people.
  
  This said, Stevan has also done excellent work in setting up this list
  and
  maintaining it. This too should be 

Re: Plan B for NIH Public Access Mandate: A Deposit Mandate

2008-09-13 Thread Michael Eisen
 it legally. 

It is only technological short-sightedness that is making
publishers and OA advocates alike imagine that the outcome is a
somehow a matter of law and legislation. It is not, and never
has been. 

It is only because we have been taking an obsolete, paper-based
view of it all that we have not realized that when authors wish
it to be so, the Web itself has made it no longer possible to
prevent authors from freely distributing their own writings,
one way or the other. There is no law against an author giving
away individual copies of his own writing.
And NIH need only mandate that authors deposit their (published
research journal) writings: giving them away for free can be
left to the individual author. The eventual outcome is obvious,
optimal and inevitable.

I strongly urge OA advocates to united under this back-up
strategy. It will allow us to snatch victory from the jaws of
defeat. 

Stevan Harnad
http://www.eprints.org/openaccess/


Michael Eisen, Ph.D. (mbei...@berkeley.edu)
Investigator
Howard Hughes Medical Institute

Associate Professor of Genetics, Genomics and Development
Department of Molecular and Cell Biology
UC Berkeley






Re: Convergent IR Deposit Mandates vs. Divergent CR Deposit Mandates

2008-07-25 Thread Michael Eisen
I haven't followed this entire thread (I never can when Stevan is
involved...), but I would like to add a few thoughts.

The NIH had lots of reasons for requiring deposition in a central
repository. But one that I have not seen mentioned is that the NIH can
ask things of its grantees, but no authority to require that
institutions set up an archive of their own, and are particularly
reluctant do anything that might be perceived as an unfunded mandate.

And why is everyone assuming that the existence of an institutional
archive requires double deposits for authors who are also under a
funder mandate to submit to a central repository? Why can't authors
just simply submit to their institutional archive and then have the
archive pass on the paper to PMC along with the minimal extra meta-
data required (grant codes, etc...)? Or conversely why can't the
institutions just harvest information about their authors from PMC?
Alma seems to suggest there's something difficult about this, but if
institutional archives are the interoperable utopia Stevan and others
tout, this should be trivial. What am I missing here?

Michael Eisen
UC Berkeley/PLoS


On Jul 25, 2008, at 8:54 AM, Alma Swan wrote:

 Can I reply to Jean-Claude and others from a slightly different
 perspective,
 that of an institution now wanting to make its outputs OA?
 
 I spent yesterday at a large London medical school to which I was
 invited to
 talk with the people involved in research policy about establishing a
 repository and making their research Open Access. The invitation
 included
 the phrase: because it is time we organised our research better and
 allowed
 access to it. In our discussions yesterday we had to deal with the
 fact
 that while over 90% of UK biomedical research is now covered by
 funder OA
 mandates (good), many of those mandates stipulate UKPMC as the
 deposit locus
 (not so good for the employers of the fundees - the universities).
 It's not
 so good because although this medical school can harvest a
 considerable
 amount of the material published by its employees from UKPMC, thus
 finding
 an easy way to start filling its own repository, this does mean it
 has an
 extra job to do. It's not a disaster, and CERN has been doing the
 same thing
 with arXiv for years, but it's another task for the repository staff.
 
 It also means that the medical school has to add a complication to a
 nice
 simple wording for its own policy, explicitly allowing those who are
 already
 under a funder mandate exemption from the medical school's policy of
 requiring researchers to deposit their work in that repository. For
 sure, it
 would be asking too much to demand that these people deposit BOTH in
 the
 institutional repository and in UKPMC. And the funders got there
 first. (And
 yes, researchers would balk at double - or more - depositing being
 required:
 I hear this complaint already and we've barely started with
 institutional
 mandates).
 
 True, we shouldn't get too wound up about this. Interoperability
 means that
 back-harvesting, forward-harvesting and upside-down-harvesting can
 go on
 wherever appropriate but it is a shame that we have arrived at a
 point where
 universities, the mainstays of our societies' research endeavours,
 have to
 develop more complex policies than would otherwise have been the
 case had
 funders simply directed their grantees to deposit their work in their
 institutional collections and harvested from there. The funders know
 where
 their grantees are, the repository software has a metadata field for
 funder,
 so the mechanics are simple. The benefit of such a move would have
 been to
 help the universities see the overall plan (earlier than they have
 done),
 ensure they put the right infrastructure in place and encouraged
 them to
 apply polices to cover *all* the research their employees do. The
 whole
 research community would thus be included and benefitting by this
 time, not
 just the biomedical community or other communities covered by big
 funder
 mandates. I would say that the research funders have rather let down
 their
 partners, the universities, in this sense.
 
 The other strand of discussion on this topic is always about where
 users
 find the Open Access information they want. The argument goes that
 they want
 to find it in subject-specific collections. Of course they do. It
 was never
 expected that searching specific institutional repositories would be a
 common practice - the whole point of OAI-PMH was to build what is
 effectively a worldwide research database, free to use, and that
 services
 would harvest and offer the packaged content of that worldwide
 database in
 myriad ways. So subject-specific collections, which are lovely,
 should be
 harvesting from the university repositories all the material that is
 relevant to that subject. They can provide all manner of nice
 services on
 that collection, tailored to the needs of that particular subject
 community.
 
 
 I thought

leveraging funder mandated deposition into central archives

2008-07-25 Thread Michael Eisen
There are some interesting threads in the discussion about whether the
NIH should have mandated deposition into institutional archives. But
the discussion is really kind of pointless, because, as we like to say
in these parts it ain't gonna happen - for both practical and
political reasons. And, whether Stevan likes it or not, other funders
are likely to follow suit (though - bless his heart - I'm sure Stevan
will never stop trying).

I would like to shift the discussion a bit to something a bit more
practical. Now that the NIH policy is in place, how can we most
effectively leverage it to advance open access. I have been trying
here at the University of California to do just this by proposing that
the University:

a) require author deposition in an institutional archive
b) require that authors amend copyright agreements with publishers to
not only allow deposition in the IR, but to allow redistribution and
reuse of the content (so, for example, the full-text could be ingested
into PMC, thereby satisfying the NIH mandate)
c) handle the deposition of material from the IR to PMC (which may, or
may not, require additional steps)

Honestly, I don't have high hopes at this point. But I'm going to keep
trying and would love some thoughts from the group about HOW to do
this (and not the endless debate about whether (b) is necessary that I
fear might ensue) and what other steps we might take make this a
teachable/actionable moment.

-Mike

Michael Eisen
UC Berkeley/PLoS


PLoS Biology impact factor

2005-06-28 Thread Michael Eisen

Thought you all might be interested that PLoS Biology received a
preliminary impact factor (based only on articles published in the
fall of 2003) of 13.9. Not quite in Nature and Science territory, but
a very good number for a startup journal from a new publisher.

All the usual caveats about impact factors apply, but it's a great
statement about the value and progress of open access.


Re: Open Access Does Not require Republishing and Reprinting Rights

2004-01-18 Thread Michael Eisen
Fytton Rowland wrote:

 If something has been placed in the public domain, anyone may use it for any
 purpose whatsoever without reference to the author.  Academic authors who
 favour Open Access are definitionally happy for anyone to read, download and
 print off their scholarly papers free of charge.  However, I for one would
 be unhappy if a publisher were to take one of my (free) papers off the WWW
 and include it in a collection of some sort which is then sold, without any
 reference to me.  I would not necessarily want any money but I'd like to be
 asked!  So I think authors are well advised to assert copyright in their
 material even if they intend to allow unlimited free access to it.

The Creative Commons Licenses that PLoS and others are now using were
designed specifically so that you can define what kind of uses you wish to
permit for your works. PLoS uses their attribution license which grants
users unlimited rights to access, use and distribute a work, so long as they
cite the original author.

I should add that a very important reason to use licenses like this is so
that you don't have to be asked for permission for something you were going
to ok anyway. Asking permission may not sound like a big deal, but if you
are trying to do something with the thousands of articles available in, say,
e-print servers, it is a practical impossibility to ask for permission from
all of the copyright holders. It makes far, far more sense for everyone
involved to agree on what kind of uses are ok, and to explicitly permit
them.


Re: Free Access vs. Open Access

2004-01-13 Thread Michael Eisen

 On Thu, 8 Jan 2004, Stevan Harnad wrote:

 There is nothing in the BOAI definition to support the free/open
 distinction that some have since attempted to make. In particular, the
 BOAI definition states that author/institution self-archiving of the
 full-text of an article is one of the two ways to make that article open
 access (BOAI-1 [green]  and BOAI-2 [gold]). Proponents of
 the free/open distinction have attempted to argue that BOAI-2 is
 open access while BOAI-1 is merely free access (unless the author
 negotiates something equivalent to the creative commons license, including
 republication rights, as in some BOAI-2 journals).

 I have argued that this is not only *not* part of the BOAI definition,
 but that it is unnecessary and would be a gratuitous deterrent if
 taken to be a necessary condition for open access.


I really don't want to beat this to death, and I think you and I are just
going to have to agree to disagree about the importance of redistribution
and reuse rights. However, I don't see how you can keep saying that the BOAI
doesn't support the distinction between free and open. The BOAI text can
speak for itself.

By 'open access' to this literature, we mean its free availability on the
public internet, permitting any users to read, download, copy, distribute,
print, search, or link to the full texts of these articles, crawl them for
indexing, pass them as data to software, or use them for any other lawful
purpose, without financial, legal, or technical barriers other than those
inseparable from gaining access to the internet itself. The only constraint
on reproduction and distribution, and the only role for copyright in this
domain, should be to give authors control over the integrity of their work
and the right to be properly acknowledged and cited.

I have been arguing that self-archiving where the original publisher
restricts uses of the self-archived version of the paper falls outside the
BOAI definition of open access. While I disagree strongly with you on this,
I accept that you think there are tactical reasons to promote such
restricted self-archiving.  But I simply can not see how you can claim that
making papers freely available in a way that explicitly prevents copying,
distribution and many other uses is consistent with the BOAI definition of
open access.


Re: Free Access vs. Open Access

2004-01-04 Thread Michael Eisen
I think an important point has been lost in the various threads on this
topic.

While there is clearly disagreement about what does and should constitute
open access, I think we all agree on two things:

1) universal free access to the peer-reviewed literature, in any form, would
be a wonderful thing - both in its own right, and because it would almost
certainly lead to universal open access

2) the greatest challenge facing open access advocates is convincing authors
to make their works available freely and/or openly by either publishing in
open access journals or by self-archiving

One of the reasons that I and many others are so ardent in our defense of
the stronger form of open access - one that explicitly permits
redistribution and reuse - is because we believe that the uses these
freedoms will enable are a critical part of making open access more
attractive to authors.

A simple example is PubMed. Virtually all scientists who work in fields
whose journals are included in PubMed use this database as their primary
tool for searching the literature, and this is unlikely to change. PubMed is
free, simple, efficient and fairly comprehensive, and, with links to
journals on publisher websites it provides a gateway to the online
scientific literature. Of course, most of the articles are behind toll
barriers, and these barriers are not transparent even to scientists at the
wealthiest institutions. An exception are the articles in PubMed Central -
these are freely available to anyone, with a prominent link provided in
PubMed. Because scientists in their role as readers experience the utility
of PMC on a daily basis, they recognize the advantages of journals that
deposit their content in PMC when they choose the journals in which they
publish, and PLoS has received considerable feedback from authors who cite
immediate availability in PMC as a major reason for their choosing to
publish with us (I'm sure BMC has had a similar experience). Recently, the
NCBI has begun linking their sequence, structure, taxonomy and other
databases to the full-text articles in PMC, thereby increasing their utility
and their impact. As people start to use these tools, the attractiveness of
journals in PMC - especially those that make their content available
immediately - will grow.

The benefits of inclusion in PMC - and in other services that will begin
taking advantage of the content published by BMC, PLoS and others open
access publishers or made truly open access through other means - are denied
to articles that are self-archived in a way that precludes their reuse and
redistribution.

While it is may be theoretically possible to do some of these things by
crawling self-archived content, it is a practical reality that relying
solely on such methods will diminish the attractiveness of open access, and
is a major reason why I believe that the things that Stevan dismisses as
frills or as organic food for the starving - things like conversion to XML
and the right to make articles available in different forms at different
places - are practical prerequisites for the success of open access.


Re: Free Access vs. Open Access

2004-01-01 Thread Michael Eisen
Stevan-

You say:

 Am I missing something? It seems to me that we have all the access and
 use we could possibly want here, without going so far as to stipulate what
 sort of velum it should appear on before declaring the access truly open!

Yes, you are missing something. You seem intent on narrowly circumscribing
the possible uses of the literature to include only those that amount to
reading and citing works, thereby needlessly limiting both current and
future uses, and it is absurd to dismissing other possible uses as perks
that exist only to promote open access journals.

I will await your reply to my earlier posting before I reiterate, once
again, the types of uses that you have left off of your exhaustive list of
possible uses of the literature.

 And none of this free vs. open business is either explicit or implicit
 in what we agreed that open access meant when we founded the BOAI.
 http://www.earlham.edu/~peters/fos/boaifaq.htm#openaccess

I don't see how you can possibly say this. The definition from BOAI follows:

By 'open access' to this literature, we mean its free availability on the
public internet, permitting any users to read, download, copy, distribute,
print, search, or link to the full texts of these articles, crawl them for
indexing, pass them as data to software, or use them for any other lawful
purpose, without financial, legal, or technical barriers other than those
inseparable from gaining access to the internet itself. The only constraint
on reproduction and distribution, and the only role for copyright in this
domain, should be to give authors control over the integrity of their work
and the right to be properly acknowledged and cited.

But you seem to be editing out the rights to distribute and use the
literature.

I don't recall it ever coming up in Budapest that we were endorsing flavors
of open access where these key elements were missing. It was always assumed
that the two strategies were alternative ways of achieving this end - a
belief that I still strongly endorse. Open access, in the true BOAI sense,
can be readily achieved by self-archiving. But - and I think this is the
crux of the current argument - self-archiving does not in and of itself
achieve open access, especially when its chief proponent is dismissing
critical parts of the open access definition as spurious. By relaixng the
definition of open access in order to appease publisher you may achieve free
access more rapidly, but this will not be without a cost.

 But before I reply I would like to introduce two historical/factual
 points, and one logical point that they entail, for reflection:

 (1) Let's ask ourselves what it was, exactly, that changed, with the
 advent of the online age, insofar as the specific literature we are
 discussing here -- which I must never tire to remind everyone is the
 annual 2.5 million articles published in the world's 24,000 peer-reviewed
 journals -- is concerned?

 Others may have other answers, but by my lights what changed was nothing
 more or less than the *means* and the *cost* of making one's peer-reviewed
 research accessible to would-be users: In the on-paper era, access had to be
 restricted to those users whose institutions could afford the subscription
 access tolls, and the potential usage and impact from those would-be
 users whose institutions could not afford the access tolls had to be
 renounced as lost -- in order to ensure the recovery of the substantial
 real costs of on-paper publication (without which there would be no access
 or impact at all).

 In the on-line era it became possible, at last, (a) for researchers,
 if they wished, to make their peer-reviewed articles accessible to
 all would-be users toll-free, by self-archiving them on the web, and
 thereby putting an end to their lost potential impact. It also become
 possible (b) for publishers, if they wished, to cut the costs of on-paper
 publication and recover the much lower on-line-only costs by charging
 the author-institution a fee per outgoing article published instead of by
 charging user-institutions an access-toll per journal or article accessed.
 http://www.arl.org/sc/subversive/

It's certainly true that the means and costs changed - but that is certainly
not all! What also changed was that it became possible to begin moving
beyond the limitations on the creative use of the knowledge contained in the
scientific literature imposed by the printed page. Saying that all that
changed for scientific publishing in the on-line era is that it became
possible to expose a greater chunk of the world to our writing, is, in my
mind, like saying all that changed for society with the birth of the
internet was that it became easier and cheaper to send letters to our
friends and family.

 In neither case is any of the following a sine qua non, though they appear
 to be 'articles of faith' for some:

 *Copyright retention by the author, or the author's institution (or, for
 that matter, absence of 

Re: Free Access vs. Open Access

2003-12-31 Thread Michael Eisen
 works are suddenly self-archived, who is
going to subscribe to journals? I just don't see how self-archiving can
provide universal free access without killing off toll-access journals in
the process (do you really think selling print subscriptions will sustain
them?). I feel that living under and promulgating the illusion that
self-archiving and toll-access journals are mutually compatible does not
hasten universal access, it delays it because it delays us facing up to the
reality that we need a new economic model for scientific publishing.


 (6) SELF-ARCHIVED FULL-TEXTS CAN BE COMPUTATIONALLY DATA-MINED: Research
 articles are not themselves research data (though they may contain
 some research data), but they can be treated as computational data if
 they are accessible toll-free online. Again, there is no need for any
 further rights or computational capabilities to do be able to do this:
 The full-text need merely be immediately, permanently, and ubiquitously
 (i.e., webwide) accessible toll-free, so any user anywhere, any time,
 can read the full-text on-screen, download it, store it, print it off,
 search/grep it, computationally process it, etc.

While there is a lot that can/could be done with self-archived free-access
works, the inability to serve up cached, or more importantly, digested and
reprocessed versions of works greatly and needlessly limits the types of
computational analysis and data-mining that can be done on the literature.
If all you want to do is search, then self-archiving is ok (although still
subotimal), but for any more sophisticated analyses it is not.



- Original Message -
From: Stevan Harnad har...@ecs.soton.ac.uk
To: american-scientist-open-access-fo...@listserver.sigmaxi.org
Sent: Tuesday, December 30, 2003 7:45 AM
Subject: Re: Free Access vs. Open Access


 ~On Mon, 29 Dec 2003, Michael Eisen wrote:

 sh Perhaps all Sally means here is that she thinks it would be more
useful
 sh if open-access (gold) journals did not use the creative-commons
 sh license, and instead, apart from providing immediate, permanent,
 sh toll-free, non-gerrymandered, online access to the full-text, the
journal
 sh required *exclusive* copyright transfer for its sale in derivative
works.
  
 sh I'd say: No harm in that; go ahead! There was never any need for the
 sh creative-commons license here anyway! Open-access provision was all
that was
 sh needed -- whether via the golden road or the green one.
  
 sh (But again, what market is there likely to be for derivative works
when the
 sh full-text is forever freely available online?)
 
  I couldn't disagree more. You are redefining open access to be no more
than
  free access. For many of us involved in open access the ability to reuse
and
  republish text is a critical part of making optimal use of the
scientific
  literature. PLoS chose the creative commons license in order to
encourage
  creative reuse of the content we publish.

 Mike,

 In this discussion thread

 Free Access Vs. Open Access
 http://www.ecs.soton.ac.uk/~harnad/Hypermail/Amsci/2956.html

 I have several times laid out in some detail the reasons I believe the
 distinction between free access and open access is not only vacuous,
 but is now even becoming an obstacle to the understanding and growth of
 free/open access itself.

 I will again summarize the points, but please, by way of reply, do not
 just reinvoke the distinction, as if it were valid and unchallenged,
 but rather defend it against the 6 points I make, if it can be defended.

 I hasten to add that it is not a defence to say that the free/open
 distinction is enshrined in the wording of the Budapest Open Access
 Initiative that we both had a hand in drafting and that we both signed:
 I considered the distinction just as empty then as I do now, but then I
 thought it was harmless, like adding for the candidate of your choice to
 the demand for voting rights. I would never have thought that anyone would
 call it not true voting rights or less than full voting rights if
 you got to vote, but the candidate of your choice was not on the ballot!

 Here is the BOAI definition:

 What does BOAI mean by open access?
 http://www.earlham.edu/~peters/fos/boaifaq.htm#openaccess

 By 'open access' to this literature, we mean its free availability
 on the public internet, permitting any users to read, download,
 copy, distribute, print, search, or link to the full texts of these
 articles, crawl them for indexing, pass them as data to software,
 or use them for any other lawful purpose, without financial, legal,
 or technical barriers other than those inseparable from gaining
 access to the internet itself.  The only constraint on reproduction
 and distribution, and the only role for copyright in this domain,
 should be to give authors control over the integrity of their work
 and the right to be properly acknowledged and cited.

 So here is my list, again:

 (1

Re: Free Access vs. Open Access

2003-12-30 Thread Michael Eisen
Stevan-

I couldn't disagree more. You are redefining open access to be no more than
free access. For many of us involved in open access the ability to reuse and
republish text is a critical part of making optimal use of the scientific
literature. PLoS chose the creative commons license in order to encourage
creative reuse of the content we publish.

You may not see the value in allowing redistribution, derivative works and
other forms of reuse, but you have to recognize that others do and that this
is an central part of the definition of open access. And you shouldn't be
encouraging this kind of confusion of open access and free access. If all
you care about is free access, then lobby for that, but don't dilute the
meaning of open access.

-Mike

- Original Message -
From: Stevan Harnad har...@ecs.soton.ac.uk
To: american-scientist-open-access-fo...@listserver.sigmaxi.org
Sent: Monday, December 29, 2003 5:23 PM
Subject: Re: Free Access vs. Open Access


 Perhaps all Sally means here is that she thinks it would be more useful
 if open-access (gold) journals did not use the creative-commons
 license, and instead, apart from providing immediate, permanent,
 toll-free, non-gerrymandered, online access to the full-text, the journal
 required *exclusive* copyright transfer for its sale in derivative works.

 I'd say: No harm in that; go ahead! There was never any need for the
 creative-commons license here anyway! Open-access provision was all that
was
 needed -- whether via the golden road or the green one.

 (But again, what market is there likely to be for derivative works when
the
 full-text is forever freely available online?)

 Stevan Harnad

  On Mon, 29 Dec 2003, Sally Morris wrote:
 
 sm I think it is perfectly reasonable (and in no way a denial of Open
Access)
 sm for a publisher to wish to retain the right to sell derivative copies
of a
 sm work, even if in its original form it is made freely available.
 
  This is indeed perfectly reasonable and correct, and in no way a denial
  of Open Access.
 
  (But if the original form of a work is freely available online, it is
  not clear what market there would be for derivative copies...)
 
 sm After all, they've got to recover their costs somehow - and if they
 sm recover more from other sources, they will not need to ask authors to
 sm pay so much.
 
  This sentence is far less clear than the prior one, and appears to be
conflating
  the case where open-access to the work is being provided by
self-archiving
  an article that has been published in a toll-access (green) journal
with
  the case where open-access to the woork is being provided by publishing
  it in an open-access (gold) journal.
 
  If the sentence referred to self-archiving green journal articles,
  then the authors are not paying anything (the green journals are still
  charging access tolls).
 
  If the sentence was referring to publishing articles in gold
(open-access)
  journals, then author/institution publication fees are paying the costs.
 
  There might conceivably be additional revenue to be made from
  selling derivative works, which could then lower the gold journal's
  author/institution fees, but (as noted) who would want to pay for
  derivative works if the full-text was already available free for all
  online?
 
  Many gold journals are using or planning to use the creative commons
  license, which (as I understand it) allows anyone to publish derivative
  works from the open-access work. That would of course include its gold
publisher
  too. So no further right needs to be retained by the gold publisher in
that
  case.
 
  Stevan Harnad
 
  NOTE: A complete archive of the ongoing discussion of providing open
  access to the peer-reviewed research literature online is available at
  the American Scientist Open Access Forum (98  99  00  01  02  03):
  
  http://amsci-forum.amsci.org/archives/American-Scientist-Open-Access-Forum.html
  http://www.ecs.soton.ac.uk/~harnad/Hypermail/Amsci/index.html
  Post discussion to: american-scientist-open-access-fo...@amsci.org
 
  Unified Dual Open-Access-Provision Policy:
  BOAI-2 (gold): Publish your article in a suitable open-access
  journal whenever one exists.
  http://www.earlham.edu/~peters/fos/boaifaq.htm#journals
  BOAI-1 (green): Otherwise, publish your article in a suitable
  toll-access journal and also self-archive it.
  http://www.eprints.org/self-faq/
  http://www.soros.org/openaccess/read.shtml
  http://www.eprints.org/signup/sign.php
 



Re: Draft letter for institutions to sign to implement Berlin Declaration

2003-12-26 Thread Michael Eisen
Stevan-

PLoS and BMC are open access publishers and thus have to be expected to put
most of our effort into promoting open-access journals, just as you put most
of your effort into promoting self-archiving. But PLoS (and, I should add
BMC) have also supported self-archiving as well, and will continue to do so,
whether or not you change the wording of this document.

I can't speak for PLoS on my own, but will run this by our board and staff
and will pass any additional suggestions they have on to you.

-Mike

- Original Message -
From: Stevan Harnad har...@ecs.soton.ac.uk
To: american-scientist-open-access-fo...@listserver.sigmaxi.org
Sent: Thursday, December 25, 2003 12:51 PM
Subject: Re: Draft letter for institutions to sign to implement Berlin


 On Thu, 25 Dec 2003, Michael Eisen wrote:

  I don't want to reopen the argument about your 5%/95% division, but I
don't
  think its appropriate or necessary to use these figures here. How about
  just:
 
  (8) New open-access journals recover their costs by charging the
  author-institution for each outgoing article they publish and making
  all published works freely and openly accessible from the moment
  of publication, instead of restricting access to subscribers
 
  (9) For articles for which no suitable open access journal exists, an
  alternative immediate solution to put an end to access denial and
  impact loss is for their authors to self-archive their full-texts online
on
  their own institutional open-access websites for all would-be users
  worldwide.

 Mike, those changes seem reasonable, but I hope you will find it equally
 reasonable that they be made only on condition that Public Library of
 Science (PLoS) then officially supports and promotes the signing of this
 statement to institutions in its own open-access promotional efforts.

 So far, both PLoS and BMC have been promoting only (8) and not (9) in
 their negotiations with institutions, and it is for that very reason that
 I have invoked the 5%/95% figure (which is fair and true -- but I agree
 that we need not reopen that here): to make it clear that the far bigger
 and faster means of providing immediate open access is being
systematically
 overlooked.

 I think it would be reasonable to dilute the statement by removing the
 5/95 contrast, but only if it will then be actively promoted by PLoS and
 BMC. If it is diluted only to have PLoS and BMC continue to promote only
 (8) unilaterally, and not (8) and (9) jointly, then I don't think the
 interests of immediate open access will be served by diluting it in
 this way.

 I know you cannot speak for BMC, but I am confident that if PLoS commits
 to promoting this joint open-access provision strategy with institutions
 instead of just promoting (8), then BMC will follow suit too.

 Best wishes, Stevan



Re: Draft letter for institutions to sign to implement Berlin

2003-12-26 Thread Michael Eisen
Stevan-


 If the Public Library of Science is dedicated to promoting OA for all
 journal articles, and not just to promoting OA journal publishing for its
 own articles, I hope that it will elect to use its vast subsidy to promote
 the Unified Joint OA Provision Policy, rather than just promoting OAJ
alone.


There is a serious misconception underlying this statement, one that is all
too often repeated by people quibbling about what PLoS is doing. It needs to
be corrected.

PLoS does not have a vast subsidy. We have a grant from the Moore
Foundation, the explicit purpose of which is to launch and promote open
access journals like PLoS Biology and PLoS Medicine. We believe that the
long-term success of open access requires building broad community support,
and thus we have always been engaged in promoting open access in general.
However, we also believe that the long-term success of open access requires
a robust and vibrant open access publishing sector, and that PLoS has to
remain focused on this goal if we are to succeed.

-Mike

- Original Message -
From: Stevan Harnad har...@ecs.soton.ac.uk
To: american-scientist-open-access-fo...@listserver.sigmaxi.org
Sent: Thursday, December 25, 2003 6:19 PM
Subject: Re: Draft letter for institutions to sign to implement Berlin


 On Thu, 25 Dec 2003, Michael Eisen wrote:

  PLoS and BMC are open access publishers and thus have to be expected to
put
  most of our effort into promoting open-access journals, just as you put
most
  of your effort into promoting self-archiving.

 Mike,

 I put all of my effort into promoting open-access provision, via the
 Unified Joint Open-Access Provision Policy:
 (OAJ) Researchers publish their research in an open-access journal
if a
 suitable one exists, otherwise
 (OAA) they publish it in a suitable toll-access journal and also
 self-archive it in their own research institution's open-access research
archive.

 I have been promoting both components of this strategy for over 10 years,
 and the OAJ cost-recovery model in particular since well before either
 PLoS or BMC existed! For some time now I have been faithfully promoting
 them jointly, as the complementary components they are.

 OAA (self-archiving) is not promoting a product, nor has it ever had
 a subsidy or promotional budget, as PLoS and BMC have. It is being
 promoted purely on the strength of the existing evidence as the powerful
 and effective means that it is for providing immediate open access to all
 of the peer-reviewed research literature: The existing evidence is that
 OAA actually does provide at least three times as much OA as OAJ does
 today, and could provide OA to all current journal articles overnight,
 tonight.

 sh I hope... Public Library of Science (PLoS)... officially supports
 sh and promotes the signing of this statement to institutions in its
 sh own open-access promotional efforts. So far, both PLoS and BMC have
 sh been promoting only [OAJ] and not [OAA] in their negotiations with
 sh institutions.
 
  I can't speak for PLoS on my own, but will run this by our board and
staff
  and will pass any additional suggestions they have on to you.

 If the Public Library of Science is dedicated to promoting OA for all
 journal articles, and not just to promoting OA journal publishing for its
 own articles, I hope that it will elect to use its vast subsidy to promote
 the Unified Joint OA Provision Policy, rather than just promoting OAJ
alone.

 Stevan Harnad

 NOTE: A complete archive of the ongoing discussion of providing open
 access to the peer-reviewed research literature online is available at
 the American Scientist Open Access Forum (98  99  00  01  02  03):
 
 http://amsci-forum.amsci.org/archives/American-Scientist-Open-Access-Forum.html
 http://www.ecs.soton.ac.uk/~harnad/Hypermail/Amsci/index.html
 Post discussion to: american-scientist-open-access-fo...@amsci.org

 Unified Dual Open-Access-Provision Policy:
 BOAI-2 (gold): Publish your article in a suitable open-access
 journal whenever one exists.
 http://www.earlham.edu/~peters/fos/boaifaq.htm#journals
 BOAI-1 (green): Otherwise, publish your article in a suitable
 toll-access journal and also self-archive it.
 http://www.eprints.org/self-faq/
 http://www.soros.org/openaccess/read.shtml
 http://www.eprints.org/signup/sign.php



Re: Draft letter for institutions to sign to implement Berlin Declaration

2003-12-25 Thread Michael Eisen
Stevan-

I don't want to reopen the argument about your 5%/95% division, but I don't
think its appropriate or necessary to use these figures here. How about
just:

(8) New open-access journals recover their costs by charging the
author-institution for each outgoing article they publish and making
all published works freely and openly accessible from the moment
of publication, instead of restricting access to subscribers

(9) For articles for which no suitable open access journal exists, an
alternative immediate solution to put an end to access denial and
impact loss is for their authors to self-archive their full-texts online on
their own institutional open-access websites for all would-be users
worldwide.

-Mike

- Original Message -
From: Stevan Harnad har...@ecs.soton.ac.uk
To: american-scientist-open-access-fo...@listserver.sigmaxi.org
Sent: Thursday, December 25, 2003 12:13 PM
Subject: Draft letter for institutions to sign to implement Berlin
Declaration


 This is the draft of a statement for universities and research
 institutions worldwide to sign to commit themselves to implementing
 the Berlin Declaration by providing open access to their peer-reviewed
 research output. Note that it is not meant to be merely a declaration of
 solidarity and support for the principle of open access, but an
 institutional commitment to open-access provision.

 Comments are welcome. The draft can be revised to incorporate recommended
 corrections, clarifications or other improvements.

 --

 Declaration of institutional commitment to implementing the
 Berlin Declaration on open-access provision
 http://www.zim.mpg.de/openaccess-berlin/berlindeclaration.html
 and the WSIS Declaration of Principles and Plan of Action
 http://www.itu.int/wsis/

 (1) Our researchers are paid (and their research projects are funded,
 often with tax-payers' money) to conduct research and to publish their
 findings (publish or perish) so that other reseachers, at other
 universities and institutions worldwide, can access, use, build-upon,
 cite and apply those findings. This is called research impact. The
 productivity and progress of research depend on its impact.

 (2) Research is published in peer-reviewed journals (24,000 worldwide,
 across all disciplines and languages, publishing about 2,500,000
 articles per year).

 (3) Unlike book-authors or journalists, research article-authors do not
 seek royalties or fees for these writings: They write them only for the
 sake of research impact. (This is why they and their institutions were
 always willing, in the paper era, to undertake the effort and expense
 of mailing out hard-copies of their articles to any would-be users
 who requested a reprint, and sometimes even to pay page-charges to the
 journal for publishing the article. Greater research impact means both
 (i) career advancement, higher salary, more research income, prizes and
 prestige for the researchers and their institutions and, more important,
 (ii) greater research productivity and progress, hence greater benefits
 to the tax-payers who fund the research.)

 (4) In the paper era, the only way for journals to cover the costs
 of peer-review and publication was to charge subscription tolls for
 access: Universities and research institutions paid the tolls so their
 own researchers could access and use the peer-reviewed research output
 of other universities and research institutions.

 (5) No institution could ever afford toll-access to anywhere near all
 24,000 journals; and most could only afford a small fraction of them --
 a fraction that keeps shrinking with rising journal prices, even in
 the Web era.

 (6) As a result, it was true in the paper era -- and is still true
 today, in the Web era -- that for each one of the 2,500,000 articles
 published yearly, most of its would-be users cannot access it. That
 means much of its potential research impact is being lost.

 (7) In the paper era, this impact loss was unavoidable, but in the Web
 era it is no longer necessary. There are two complementary ways in which
 all access-denial -- and hence all impact-denial -- can now be eradicated:

 (8) New open-access journals can recover their costs by charging the
 author-institution for each outgoing article they publish, instead of
 charging the user-institution for each journal or article they access.
 (But fewer than 1000 open-access journals exist so far, publishing only
 about 5% out of the 2,500,000 articles that are published every year.)

 (9) For the remaining 95%, the articles published yearly in the 23,400
 toll-access journals, the immediate solution to put an end to access
 denial and impact loss is for their authors to self-archive their
 full-texts online on their own institutional open-access websites for
 all would-be users worldwide.

 (10) As soon as universities, research institutions and research funders
 extend their existing publish or 

Re: Query About Open-Access Journal Start-Ups

2003-12-19 Thread Michael Eisen

  My name is [identity deleted], I am a graduate student in [] at []. My
  professor [], recommended you when I discussed writing an essay on the
  internet and the monopoloy of the journals.  I think he was amused when
  I said I wanted to take a marxist approach... Not so sure about that
anymore.

 It is not that journals have a monopoly (there are 24,000 different
 peer-reviewed journals, publishing about 2.5 million articles per
 year), although 1500 of them are published by one publisher. What
 the top journals have is *inelastic demand.* (The university libraries
 *must* subscribe to them, because their researchers need access.) So
 the problem is not monopoly but access; nor is it a marxist matter:
 http://www.eprints.org/self-faq/#14.Capitalism


I think one of the main problems is that journals are not monopolies. The
problem is not that any one publisher has control over the market, but
rather that any non-open access publisher has a monopoly on the distribution
of every article that they publish. Journal articles are not
interchangeable, and thus it is important to view the distribution of every
article as a market of its own. When the right to distribute any article or
collection of articles (no matter how small a fraction of the total
industry) is monopolized, all of the problems of monopolies follow -
especially excessive prices, poor customer service, etc... That these
monopolies also have a captive market that requires their products only
makes things worse.


Re: Free Access vs. Open Access

2003-12-15 Thread Michael Eisen
://www.ecs.soton.ac.uk/~harnad/Hypermail/Amsci/3223.html
 http://www.earlham.edu/~peters/fos/boaifaq.htm#openaccess

 In approximate numbers, we are taking about how to provide OA, in the
above sense,
 to the yearly 2,500,000 articles that appear in the planet's 24,000
peer-reviewed
 journals (across all disciplines and languages).

 Before I proceed to a point-by-point commentary on Mike's posting, I will
 reproduce it in full. But before that I will provide a succinct summary
 of my reply. Here it is:

 There is only one, unified OA provision strategy: Publish your
 article in an OA journal if a suitable one exists, otherwise
 publish your article in a suitable TA journal and also self-archive
 it. There is no competition between these two components; they
 are complementary. The discussion below is only about what is
 the immediate scope for each component today. All are agreed that both
 components are underutilized. The only disagreement is about *how
 much* each component is underutilized. The disagreement would
 be immediately mooted if the advocates of each component always
 explicitly advocated their own component as only one part of the
 unified OA provision strategy: Publish your article in an OA journal
 if a suitable one exists otherwise publish your article in a suitable
 TA journal and also self-archive it.

 First, here is Mike's comment in full:

 On Thu, 11 Dec 2003, Michael Eisen wrote:

  I think Sally is absolutely correct that less than 2.5% of published
content
  is published in open access journals, but that doesn't count the large
  amount of material that is made freely available by fee-for-access
  publishers through their own websites or through PubMed Central. I, of
  course, don't count this later class as being truly open access, but it
is
  as available as self-archived content and should be given its proper
due.
 
  I would also like to object, once again, to Stevan's continued use of
this
  5% open access / 95% self-archiving number. It's grossly unfair to
contrast
  reality (5% of articles currently published in open access journals) on
  one side with potential (that 95% - or more accurately something like
50% -
  of articles COULD be self-archived). With BMC's diverse collection of
  journals, PLoS, and the many other open-access publishers in DOAJ
(including
  high-end journals like PLoS Biology, J. Biol, JCI, BMJ) virtually any
  biomedical research article could be published in an open-access journal
  today.
 
  Thus, most authors - many, many more than the 5% you imply - who want to
  make their work freely available have a choice - they can publish it in
a
  green fee-for-access journal and self-archive it, or they can publish
in
  an open access gold journal. They may have reasons to choose the
former
  route, and there is certainly a lot of work that needs to be done to
make
  open access journals more appealing, but let's stop implying that the
open
  access journal option wasn't available.

 I now reply point by point:

  I think Sally is absolutely correct that less than 2.5% of published
content
  is published in open access journals, but that doesn't count the large
  amount of material that is made freely available by fee-for-access
  publishers through their own websites or through PubMed Central. I, of
  course, don't count this latter class as being truly open access, but it
is
  as available as self-archived content and should be given its proper
due.

 I completely agree with Mike that all freely-accessible full-text journal
 articles should be counted, but I don't think it is giving them their
 proper due to decline to count them as truly OA! Unless, of course,
 they fail to meet the full OA definition:

 FREE, IMMEDIATE, PERMANENT ACCESS TO REFEREED-ARTICLE FULL-TEXTS
ONLINE

 Is there any need for a universal Open Access label?
 http://www.ecs.soton.ac.uk/~harnad/Hypermail/Amsci/3223.html

 They could fail to meet that definition not only by failing to be free, or
 failing to be refereed journal articles, or failing to be full-texts
online.
 They could also fail by not being immediate or by not being permanent. (A
 journal that makes its contents free online after a delayed embargo period
of 6
 months to 2 years or more is certainly no OA journal. Nor is a journal
that
 temporarily makes its contents free online as a from of advertisement, but
then
 removes them.)

 Harnad, S. (2001) AAAS's Response: Too Little,
 Too Late. Science dEbates [online] 2 April 2001.
 http://www.sciencemag.org/cgi/eletters/291/5512/2318b

 Mike and I are agreed on this. We do disagree, however, on the free/open
 distinction (which I consider completely spurious):

 Free Access vs. Open Access
 http://www.ecs.soton.ac.uk/~harnad/Hypermail/Amsci/2956.html

 But there is also an important logical point which Mike seems to have
overlooked:
 If a journal provides the following for *all* of its articles:

 FREE

Re: Journals Peer-Reviewed Journals Open-Access Journals Open Access

2003-12-12 Thread Michael Eisen
I think Sally is absolutely correct that less than 2.5% of published content
is published in open access journals, but that doesn't count the large
amount of material that is made freely available by fee-for-access
publishers through their own websites or through PubMed Central. I, of
course, don't count this later class as being truly open access, but it is
as available as self-archived content and should be given its proper due.

I would also like to object, once again, to Stevan's continued use of this
5% open access / 95% self-archiving number. It's grossly unfair to contrast
reality (5% of articles currrently published in open access journals) on
one side with potential (that 95% - or more accurately something like 50% -
of articles COULD be self-archived). With BMC's diverse collection of
journals, PLoS, and the many other open-access publishers in DOAJ (including
high-end journals like PLoS Biology, J. Biol, JCI, BMJ) virtually any
biomedical research article could be published in an open-access journal
today.

Thus, most authors - many, many more than the 5% you imply - who want to
make their work freely available have a choice - they can publish it in a
green fee-for-access journal and self-archive it, or they can publish in
an open access gold journal. They may have reasons to choose the former
route, and there is certainly a lot of work that needs to be done to make
open access journals more appealing, but let's stop implying that the open
access journal option wasn't available.


- Original Message -
From: Stevan Harnad har...@ecs.soton.ac.uk
To: american-scientist-open-access-fo...@listserver.sigmaxi.org
Sent: Thursday, December 11, 2003 1:29 PM
Subject: Re: Journals  Peer-Reviewed Journals  Open-Access Journals  Open 
Access


 On Thu, 11 Dec 2003, Sally Morris wrote:

  I would question Stevan's estimate that 2.5% of articles are published
in OA
  journals.  While it does indeed look as if 2 - 2.5% of peer reviewed
  journals are OA (that is, if all those listed by Lund et al are peer
  reviewed), I very much doubt that they carry as many articles as the
rest.
  This is because OA journals are, almost without exception, relatively
new
  and extremely long-established journals tend to be far, far, bigger in
terms
  of issues and articles published per year.

 I don't disagree with Sally's suggestion that 2.5% of journals does
 not necessarily mean 2.5% of articles published in journals. I was
 very deliberately using a very conservative, high-end estimate (sometimes
 I even use 5%) merely to illustrate how minuscule is the amount of OA that
 can currently be provided via the OA journal route (gold) and hence
 how important it is to supplement it via the OA self-archiving route
 (green), today.
 http://www.ecs.soton.ac.uk/~harnad/Temp/self-archiving_files/Slide0024.gif

 Stevan Harnad

 NOTE: A complete archive of the ongoing discussion of providing open
 access to the peer-reviewed research literature online is available at
 the American Scientist Open Access Forum (98  99  00  01  02  03):
 
 http://amsci-forum.amsci.org/archives/American-Scientist-Open-Access-Forum.html
 http://www.ecs.soton.ac.uk/~harnad/Hypermail/Amsci/index.html
 Post discussion to: american-scientist-open-access-fo...@amsci.org

 Dual Open-Access-Provision Policy:
 BOAI-2 (gold): Publish your article in a suitable open-access
 journal whenever one exists.
 http://www.earlham.edu/~peters/fos/boaifaq.htm#journals
 BOAI-1 (green): Otherwise, publish your article in a suitable
 toll-access journal and also self-archive it.
 http://www.eprints.org/self-faq/
 http://www.soros.org/openaccess/read.shtml
 http://www.eprints.org/signup/sign.php



Re: Central vs. Distributed Archives

2003-10-30 Thread Michael Eisen
I would like you to defend your claim that PLoS is crunching small
publishers. Can you provide an example?

- Original Message -
From: Dr. Vinod Scaria drvi...@hotpop.com
To: american-scientist-open-access-fo...@listserver.sigmaxi.org
Sent: Thursday, October 30, 2003 9:07 AM
Subject: Re: Central vs. Distributed Archives


 CALICUT MEDICAL JOURNAL
  http://www.calicutmedicaljournal.org
 ARCHIVES AT COGPRINTS
 ***

 As we all know, Open Access Publishing is not gaining the momentum as
 far as Journals published from Developing Countries are concerned [with
 reference to western Journals]. Many reasons can be attributed like:

 1. Monopolistic nature of Open Access Publishers like BioMedCentral
 http://www. biomedcentral.com which pursues the author pays
 and would drive away any author from Developing countries. Thus
 obviously publishers from Developing countries would have second
 thoughts before starting one at BMC.

 By meaning monopolistic, I refer to the almost complete control over open
 access publishing- say about 75% of open Access Journals in Medicine.and
 Mega organisations like PLOS are crunching the small publishers, as they
 can easily override the smaller ones with the mega funding they have.
 see: http://bmj.bmjjournals.com/cgi/content/full/326/7392/766#art

 2. As I previously stated in my Editorial in Internet Health-
 www. virtualmed. netfirms. com/internethealth/articleapril03. html ,
 the fear of losing revenue, which are the sole source of sustenance
 of many Journals [though some make a meagre profit].

 3. Lack of sufficient expertise and
 exposure to Open Access Publishing. 
 www. virtualmed. netfirms. com/internethealth/opinion0303. html
 http://bmj. com/cgi/eletters/326/7382/182/b 

 But recent developments are worth mentioning - at least from India. Online
 Journal of Health and Allied Sciences www. ojhas. org , India's first
 Online BioMedical journal declared a couple of months back that they
 would go Open.

 [I am in the Editorial board of OJHAS from Sept 2003]. OJHAS is
 edited and published by a small group of scholars with no external
 support. Everything from Web Design to Editing and Review are done by
 voluntarily by the Editorial team. It also stands as a fine example of
 the fact that Open Access Journals can indeed be successfully organised
 and can indeed survive without an author pays model.

 Now coming to the Archival, Cogprints was our first choice for many
reasons

 1] It offers interoperability [as mentioned by Harnad]
 2] It offers unmatched popularity
 3] It has been there for years and we can be sure of the permanence
 4] It is of course FREE.

 And as Harnad suggested, there is no reason why Journals should not
 be archived at Open Archives, be it self maintained repositories or
 Centralised ones. In fact Open Archiving of electronic journals is
 the need of the hour because our own studies [unpublished] show that
 Electronic journals are just as ephemeral as websites. Scholarly
 communication should never be lost at the cost of copyright
 restrictions. Many of these journals have perhaps done more harm than
 good by locking the access by copyright restrictions.

 Moreover, electronic journals are equally vulnerable to the vagaries
 of the Internet. For example, JMIR www. jmir. org went suddenly offline
 some time back [i think it was an year or so] making the whole content
 inaccessible. [But it reappeared later and now is an Open Access Journal].

 Thus in short, OPen Archiving of Journals as a whole is perhaps to be
 discussed in a wider perspective than just making it OPEN. The major
 emphasis should be the PERMANENCE of Open Archiving. I hope this post will
 surely trigger a debate on the topic.

 Kind regards

 Dr. Vinod Scaria
 Executive Editor: Calicut Medical Journal
 Assoc Editor: Online Journal of Health and Allied Sciences
 Editor in Chief: Internet He@ lth

 WEB: www. drvinod. netfirms. com
 MAIL: vinodscaria@yahoo. co. in
 Mobile: +91 98474 65452

 - Original Message -
 From: Stevan Harnad
 To: AMERICAN-SCIENTIST-OPEN-ACCESS-FORUM@LISTSERVER. SIGMAXI. ORG
 Sent: Wednesday, October 29, 2003 3:38 AM
 Subject: Re: Central vs. Distributed Archives

 The two items that follow below are by Vinod Scario from Peter Suber's
 Open Access News http://www. earlham. edu/~peters/fos/fosblog. html

 It provides an interesting and inspiring example of the power
 and value of OAI-interoperability http://www. openarchives. org/
 and the interdependence of the two open-access strategies (open-access
 self-archiving and open-access journal publishing) that this new online
 open-access journal, produced in India, is being made accessible
 by archiving it http://calicutmedicaljournal. org/archives. html
 in a specially created sector of CogPrints in the UK,
 http://cogprints. ecs. soton. ac. uk/view/subjects/JOURNALS. html
 a 

Re: On the Need to Take Both Roads to Open Access

2003-10-09 Thread Michael Eisen

 Whether the digital text (including data) of an article is made openly
 accessible by being published in an open-access journal or by being
 published in a toll-access journal but being self-archived in an
 open-access archive is irrelevant: Either way, the data reported in it
 are available to be used computationally. Don't confuse the use and
 re-use of data with the use of the *text* to generate other text (other
 than by quoting it): Any other re-use of text is plagiarism (i.e., if it
 is not quotation). Text, unlike data and software code, cannot be
 reprocessed and made one's own: It can only be cited and quoted.
  http://www.ecs.soton.ac.uk/~harnad/Hypermail/Amsci/2967.html


Stevan-

What do you mean don't confuse the re-use of data with the use of text?
These are exactly the same thing. There are two goals for open access
publishing. The first is free access for all to the scientific publications.
The second is the ability to treat text as data - something that you deride.

If you think that the only possible use of text is to cite and quote than
you have completely missed the potential of open access publishing. If all
we accomplish is to let people read any paper they want, we will have
accomplished a lot, but we will still have failed. The true potential of
open access publishing is the ways in which we can go beyond simply being
able to read papers for free online.

Searching the full-text of articles is an obvious example of a use of text
that goes beyond citing and quoting. And searching is only a trivial example
of a use of the content of scientific publications. Scientific publications
are not just words - thet contain knowledge, and the type of use Richard is
referring to deals not with the data described in a paper, but with the
knowledge contained in the paper itself- ideas, methods, results and
insights.

The open archives movement is focussed on making it possible for people to
read individual works for free. Open access publishing is focussed on this
task, as well as the more important goal of ensuring that the contents -
data as well as text - of all scientific publication are available not only
for people to access, but for them to use. So long as self-archiving
focusses only on access, it will not realize the full potential of
electronic publishing to transform how we use the scientific literature.

-Michael

Michael Eisen, Ph.D. (mbei...@lbl.gov)

Lawrence Berkeley National Lab and
Department of Molecular and Cell Biology
University of California at Berkeley
http://rana.lbl.gov

Lead the Next Scientific Revolution
Publish Your Best Work in PLoS Biology
www.plos.org


Re: On the Need to Take Both Roads to Open Access

2003-10-09 Thread Michael Eisen
Thank you!

- Original Message -
From: Richard Durbin r...@sanger.ac.uk
To: american-scientist-open-access-fo...@listserver.sigmaxi.org
Sent: Wednesday, October 08, 2003 3:40 PM
Subject: Re: On the Need to Take Both Roads to Open Access


 I have been watching this mailing list for some time.

 Although I applaud open archiving, from my point of view open access
 publishing is what is needed in the long run.

 This is because the key property is not that everyone can get at a copy
 of a publication, but rather that people can use information in it
 computationally, producing extracts, syntheses, new indexes etc.  This
 is now possible.

 I come from the community that led open release of data in genomics: the
 C.elegans genome mapping then sequencing project, followed by the human
 genome project.  The real value of the way that genome data such as the
 human genome sequence is available is that people can use it and build
 on it.  Building on publications used to be open, because the only way
 to do it was to read and then write something else (e.g. a review or a
 new paper with a new idea).  And a subscription cost was reasonable
 historically because most of the costs were in printing and
 distribution.  Now, at least in biological science, a lot of valuable
 data are published in papers in tables and figures, and people are
 developing computational tools that can use this information, and even
 the free text.  (See www.textpresso.org for an example of the latter.)
 So there are ways to use the information in papers for new science, but
 to do this we need much more open access to the literature.

 Research funding is provided to generate outputs that others can build
 on.  Funders, and the rest of the system, want publication to be as
 unconstrained as possible, and the only reasons that we haven't yet
 taken advantage of electronic publishing to make things less constrained
 are historical inertia and the commercial interests of some publishers
 (see last week's Wellcome Trust report).

 So, for me, Open Archiving is just a tactical move to keep the
 publishers moving to the larger goal of changing scientific publishing
 to a better and more natural model, which is possible now with the
 network and electronic publishing.

 Richard Durbin
 Head of Informatics, Wellcome Trust Sanger Institute

 Stevan Harnad wrote:
  Scotomata in the Open Access Movement
 
  A blind spot seems to be growing at the *center* (not the edges)
  of the Open-Access-Publishing (OApub) road to Open Access (OA). OApub is
a
  valid and welcome road to OA, but in the minds of many of its proponents
  the idea seems to have grown that OApub *is* OA, and that *only* OApub
  is OA.
 
  As a result, because OApub also seems to be a much easier concept
  for researchers to understand than Open-Access Self-Archiving (OAarch),
  and because this easier concept has now also trickled through to some
  research funding bodies, legislators, and even the popular press --
  Open Access (OA) itself, despite the superficial signs of its growth
  and progress, is now again at risk of being detoured into yet another
  decade of needless delay.
  http://www.ecs.soton.ac.uk/~harnad/Temp/dual-strategy.ppt
 
  Part of the problem is that OApub has at least three substantial hurdles
  to surmount:
 
  (OApub-1) OA journals have to be created/converted
  http://www.doaj.org/
 
  (OApub-2) Funding sources must be found for paying the author
charges
  for publishing in those OA journals (hence the Bethesda Statement
  http://www.ecs.soton.ac.uk/~harnad/Hypermail/Amsci/2878.html ), and
 
  (OApub-3) Authors must be persuaded to publish in those OA journals
  (hence the Sabo Bill
  http://www.ecs.soton.ac.uk/~harnad/Hypermail/Amsci/2977.html ).
 
  This would all be fine and as it should be were it anywhere near the
  truth that OApub was indeed the only, or easiest, or most direct,
  or surest road to OA. But none of that is the case! Not only
  is there another road, but that other road is easier, more direct,
  and surer. It calls for only one step, not three or more, namely:
 
  (OAarch-1) Authors must be persuaded to self-archive.
 
  The archives are already there (but near-empty) for the making or
  taking. At least 55% of publishers already support OAarch, and no
further
  funding or journal-creation, -conversion, or -renunciation is needed.
  http://www.ecs.soton.ac.uk/~harnad/Temp/self-archiving.ppt
 
  But if one is strongly committed to OApub as the *only* road to achieve
  OA, or the main one, one will not have any inclination to stress the
  *other* road to OA, let alone that it is faster, easier, more direct
  or surer!
 
  Worse, OAarch may not be just a blind spot for OApub: it may even be
  perceived as an obstacle by some OApub advocates: For unless OAarch can
  somehow be minimized or dismissed as an unstable, anarchic, impractical,
  even *illegal* non-starter, there is a chance 

Re: Detecting Plagiarism

2003-07-23 Thread Michael Eisen
Sally

Are there statistics on how often and through what means scientific journals
detect and pursue plagiarism?

These would be very useful to help frame these discussions, as would some
concrete examples that demonstrate the role that copyright plays in these
actions. It seems like you would be in a good position to provide some.

Michael


- Original Message -
From: Sally Morris sec-...@alpsp.org
To: american-scientist-open-access-fo...@listserver.sigmaxi.org
Sent: Wednesday, July 23, 2003 9:25 AM
Subject: Re: Learned Society Publisher's Comment on PLoS/Sabo


 Actually, it is pretty difficult for individual authors to pursue
 plagiarists, whereas in my experience journal publishers both can and do
 (often via their contacts with the publishers of the offending journals).
I
 don't think publishers' *willingness* to do so has anything at all to do
 with copyright ownership;  however, their *ability* to act immediately and
 decisively, in the courts if absolutely necessary, is strengthened by
 copyright ownership, as Martin Blume convincingly pointed out at the last
 Zwolle Group conference

 Sally

 Sally Morris, Secretary-General
 Association of Learned and Professional Society Publishers
 South House, The Street, Clapham, Worthing, West Sussex BN13 3UU, UK

 Phone:  01903 871686 Fax:  01903 871457 E-mail:  sec-...@alpsp.org
 ALPSP Website  http://www.alpsp.org


 - Original Message -
 From: Stevan Harnad har...@ecs.soton.ac.uk
 To: american-scientist-open-access-fo...@listserver.sigmaxi.org
 Sent: Sunday, July 20, 2003 1:00 AM
 Subject: Re: Learned Society Publisher's Comment on PLoS/Sabo


  On Sat, 19 Jul 2003, Patrick Brown wrote:
 
   On Saturday, July 19, 2003, at 08:07 AM, Stevan Harnad wrote:
  
  sh The Sabo act is indeed a bit flaky on copyright. Copyright
protection
  sh against plagiarism (theft-of-authorship) and text-corruption will
of
  sh course have to be maintained. But this has nothing whatsoever to do
  sh with toll-access publishers' use of copyright as protection against
  sh piracy (theft-of-text).
  
   Copyright protection has never been used as a defense against
   plagiarism of scientific and scholarly work published in research
   journals.
 
  Never is probably overstating it, but I am sure that journals have
  rarely gone after plagiarists, partly because research plagiarism is
  rare, and partly because, as I noted, their main interest is in
  copyright protection against theft-of-text, not theft-of-authorship.
 
  But I do think that research authors need and want protection from
  theft-of-authorship, as well as from text-corruption (reproduction of
  altered text).
  http://www.lboro.ac.uk/departments/ls/disresearch/romeo/
 
   The disincentive to those who would be tempted to plagiarize
   is not the law but very effective and clear community standards of
   behavior.
 
  But the fact that it also happens to be illegal helps. (And the way to
  win researchers over to the benefits of open access is not by awakening
  their fears of plagiarism.)
 
   Exposure of an act of plagiarism ruins the perpetrator's
   reputations and almost inevitably costs them their grant support and
   their jobs.
 
  I agree. And I would even add that it is mostly a victimless crime.
  (Important research's priority is immediately and widely known;
  unimportant research is less worth worrying about. I am not the victim
  if you take my papers and publish them as your own in some obscure
  journal in order to get tenure or funding at some uninformed
  institution. At worst, the victim is the duped institution, not me.)
 
  But authors nevertheless don't like the prospect of plagiarism, and
  there is no reason *whatsoever* to couple open-access with any lesser
  legal protection against plagiarism than that afforded by copyright
  law.
 
   The classic academic plagiarism involves stealing work
   from an obscure publication, and often publishing it in an equally
   obscure publication, so that the risk of detection is minimized.
There
   could be no better protection than to have immediate, easy free online
   access to an authoritative copy of the original work, from a trusted
   source.
 
  I agree 100%. Open access maximizes the likelihood of detection. But
now,
  when we are still trying to allay the research community's prima facie
  hesitancy about open access, a time when open access is already long
  overdue, but definitiely not yet upon us -- this is *not* the time to
  reinforce their worries that open access might come at the cost of a
loss
  of legal protection against plagiarism and corruption of their texts!
 
   Copyright, to the extent that it is used to restrict access
   (and for most online academic journals, proscribe independent users
   from automatic searching and indexing of the text), protects
   plagiarizers from being detected.
 
  Copyright, when it is used for (publisher) protection against
  theft-of-text, does the refereed-research community 

Re: Nature's vs. Science's Embargo Policy

2003-01-11 Thread Michael Eisen
, likewise conistent with the above:

[From Nature License FAQ]
The licence says I may post the PDF on my own web site. What does
own mean?

It means a personal site, or portion of a site, either owned
by you or at your institution (provided this institution is
not-for-profit), devoted to you and your work. If in doubt, please
contact permissi...@nature.com.

http://npg.nature.com/npg/servlet/Content?data=xml/05_faq.xmlstyle=xml/05_f
aq.xsl

 So all of this seems to agree with the reply to Hazel's inquiry and the
 reply from nature's permissions department.

 But on Thu, 9 Jan 2003 Michael Eisen mbei...@lbl.gov wrote:

 me [Nature] explicitly preclude placing the papers in an archive!
 
Authors may also post a copy of their paper on their own website
once the printed edition has been published, provided that they also
provide a link from the contribution to Nature's website. 'Their
own' refers to any site devoted to them, whether owned by them
or by a not-for-profit employer. However, it does not mean open
archival websites, such as those that host collections of articles
by an institution's researchers, which would amount to a breach of
our licence.

 Mike, where is this quote from? (Could you simply have gotten a piece
 of incorrect advice from an uninformed person in Nature's Permissions
 Department?)

 Cheers, Stevan


Re: Update on Public Library of Science Initiative

2001-09-04 Thread Michael Eisen
I can speak for PLoS and will contact you and Mike offline.

- Original Message -
From: Peter Suber pet...@earlham.edu
To: american-scientist-open-access-fo...@listserver.sigmaxi.org
Sent: Tuesday, September 04, 2001 9:52 AM
Subject: Re: Update on Public Library of Science Initiative 


 At 01:16 PM 9/3/2001 +0100, you wrote:
 Two other current initiatives are relevant here.  ICAAP is a mutual
 self-help organisation for newly established free e-journals (mostly in
the
 humanities).  SPARC is a library-centred initiative to support the
setting
 up of lower-cost alternatives to overpriced journals.  Have the PLoS
 initiators tried to establish diplomatic relations with these other
 organisations?  SPARC journals aren't free, but might be willing to be
 PLoS-compliant.
 
 Fytton Rowland.

   I'm on the ICAAP board and have discussed this with Mike Sosteric,
 the ICAAP director.  We fully support PLoS and can imagine many large and
 small ways that diplomatic relations would help both organizations and
 the larger cause to which they are both committed.  ICAAP can provide
 technology and support for new free online journals.  It can work with
PLoS
 to extend its initiative to the humanities and social sciences.  We'd like
 to explore issues of mutual concern and give any assistance we can.  If
 anyone on this list can speak for PLoS, please contact me or Mike Sosteric
 (mi...@athabascau.ca); meantime, we'll try other ways to contact the PLoS
 leadership.

   Peter

 --
 Peter Suber, Professor of Philosophy
 Earlham College, Richmond, Indiana, 47374
 Email pet...@earlham.edu
 Web http://www.earlham.edu/~peters

 Editor, The Free Online Scholarship Newsletter
 http://www.earlham.edu/~peters/fos/



Re: Science Article (Roberts et al.) and Science Editorial

2001-03-27 Thread Michael Eisen
If you want to go around handing out little gold stars anytime the journals
take a step in the right direction, then fine, Science gets a star. But it
is completely ridiculous to argue that differences between the sides is
merely posturing. The difference between free access after one year at a
single fixed location (e.g. Science's website) is more than just
semantically different from free and open disribution of the material they
publish. It is the difference between two completely different views of who
should own and control the scientific literature. Science and most other
journals believe that the only permanent record of the scientific process
belongs to them, and that they alone should be allowed to decide the terms
under which this material is used. I strongly disagree.

Michael Eisen, Ph.D.  (mbei...@lbl.gov)
Lawrence Berkeley National Lab, and
Department of Molecular and Cell Biology
University of California at Berkeley
http://rana.lbl.gov

Support Unrestricted Access to Scientific Publications
Visit http://www.publiclibraryofscience.org

- Original Message -
From: David Goodman dgood...@phoenix.princeton.edu
To: american-scientist-open-access-fo...@listserver.sigmaxi.org
Sent: Tuesday, March 27, 2001 2:10 PM
Subject: Re: Science Article (Roberts et al.) and Science Editorial


 This is yet another example of an unnecessary debate between two
 compatible approaches.

 Having free access after a year is clearly not as good as having it
 immediately. But it is better than never having it. Its intended
 beneficiaries are not those active researchers in the primary field of the
 journal. Its intended beneficiaries include: people in underdeveloped
 countries, students and faculty in small colleges who will see the items
 referred to in indexes and later articles, and people in other fields who
 will see an occasional later reference. These are important groups,
 comprising many more people than the active workers in a specialty.

 I cannot see how one approach will harm the other. Of course we should
 have free universal archiving, both discipline and university based. But
 while we have the existing journals as they are, let's make
 the best use of them we can. People will publish in whatever way
 gives their work  best exposure to those who matter to them, and that
 carry the highest prestige. The balance of these two factors will vary
 from person to person, as well as from field to field.

 Let's all stop saying that any approach that isn't the same as one's own
 must have fatal defects, and that victory will go to the person who is the
 cleverest at presenting them. (Though I will say that reading the
 messages in this and previous controversies has given me a very good
 appreciation of skillful argumentative prose style.)

  David Goodman, Princeton University Biology
 Library  dgood...@princeton.edu
609-258-3235