Re: [matplotlib-devel] basemap installation problem with mpl master

2013-07-06 Thread Damon McDougall
On Sat, Jul 6, 2013 at 1:53 AM, Eric Firing  wrote:

> If I do a clean install of mpl master, and then of basemap, basemap
> lands in dist-packages/mpl_toolkits, as it always has.  But now it is
> not found--I can't import it.  It seems that now the *real* mpl_toolkits
> is cleverly hidden inside an egg directory with a monstrous name,
> leaving basemap orphaned in a directory with no __init__.py.  As a
> workaround I can symlink it into the egg location.  I suspect the real
> solution will require basemap to use setuptools, correct?  I don't know
> how to do this, so I hope someone who does will submit a PR.


Actually, using the new setuptools isn't adequate, I just tried it locally
on my machine and it still doesn't install itself into the matplotlib egg.

I think the proper solution here is to add basemap as an optional
dependency to matplotlib and have the user set a flag (off by default) to
pull basemap if it's desired.

Does that sound like a reasonable solution?

P.S.  Note that the other mpl_toolkits are installed into the correct place
because they are shipped with matplotlib and installed at the same time.
 We could ship basemap with matplotlib too but it's a rather large download.

Best wishes,
Damon

-- 
Damon McDougall
http://www.damon-is-a-geek.com
Institute for Computational Engineering Sciences
201 E. 24th St.
Stop C0200
The University of Texas at Austin
Austin, TX 78712-1229
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Re: [matplotlib-devel] basemap installation problem with mpl master

2013-07-06 Thread Jeff Whitaker
 	   
   	Damon McDougall  
  July 6, 2013 9:32
 AMIf
 I do a clean install of mpl master, and then of basemap, basemap
lands in dist-packages/mpl_toolkits, as it always has.  But now it is
not found--I can't import it.  It seems that now the *real* mpl_toolkits
is cleverly hidden inside an egg directory with a monstrous name,
leaving basemap orphaned in a directory with no __init__.py.  As a
workaround I can symlink it into the egg location.  I suspect the real
solution will require basemap to use setuptools, correct?  I don't know
how to do this, so I hope someone who does will submit a PR.Actually, using the new setuptools isn't adequate, I just 
tried it locally on my machine and it still doesn't install itself into 
the matplotlib egg.
I think the proper solution here 
is to add basemap as an optional dependency to matplotlib and have the 
user set a flag (off by default) to pull basemap if it's desired
Does that sound like a reasonable solution?What
 if a user decides later that he/she wants to install basemap?  Then 
they would have to reinstall matplotlib?  That doesn't sound reasonable 
to me.  How about having matplotlib install a symlink to the egg
 location?Why the change to using setuptools by default in the 
first place?-JeffP.S.  Note that the other mpl_toolkits are installed into the 
correct place because they are shipped with matplotlib and installed at 
the same time.  We could ship basemap with matplotlib too but it's a 
rather large download.
Best wishes,Damon--
 Damon McDougallhttp://www.damon-is-a-geek.comInstitute
 for Computational Engineering Sciences
201 E. 24th St.Stop C0200The University of Texas at AustinAustin,
 TX 78712-1229


 	   
   	Eric Firing  
  July 6, 2013 
12:53 AMIf I do a clean install of mpl 
master, and then of basemap, basemap 
lands in dist-packages/mpl_toolkits, as it always has.  But now it is 
not found--I can't import it.  It seems that now the *real* mpl_toolkits
 
is cleverly hidden inside an egg directory with a monstrous name, 
leaving basemap orphaned in a directory with no __init__.py.  As a 
workaround I can symlink it into the egg location.  I suspect the real 
solution will require basemap to use setuptools, correct?  I don't know 
how to do this, so I hope someone who does will submit a PR.

Eric

 
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Re: [matplotlib-devel] basemap installation problem with mpl master

2013-07-06 Thread Damon McDougall
On Sat, Jul 6, 2013 at 11:04 AM, Jeff Whitaker  wrote:

>   Damon McDougall 
>  July 6, 2013 9:32 AM
>
>
>
> If I do a clean install of mpl master, and then of basemap, basemap
>> lands in dist-packages/mpl_toolkits, as it always has.  But now it is
>> not found--I can't import it.  It seems that now the *real* mpl_toolkits
>> is cleverly hidden inside an egg directory with a monstrous name,
>> leaving basemap orphaned in a directory with no __init__.py.  As a
>> workaround I can symlink it into the egg location.  I suspect the real
>> solution will require basemap to use setuptools, correct?  I don't know
>> how to do this, so I hope someone who does will submit a PR.
>
>
> Actually, using the new setuptools isn't adequate, I just tried it locally
> on my machine and it still doesn't install itself into the matplotlib egg.
>
> I think the proper solution here is to add basemap as an optional
> dependency to matplotlib and have the user set a flag (off by default) to
> pull basemap if it's desired
>
>
> Does that sound like a reasonable solution?
>
>
> What if a user decides later that he/she wants to install basemap?  Then
> they would have to reinstall matplotlib?  That doesn't sound reasonable to
> me.
>

Actually, on reflection, I'm in agreement with you.  I'm comfortable
installing from source but this poses a larger problem when users download
the basemap binary and expect it to Just Work.

How about having matplotlib install a symlink to the egg location?
>

If there's a way for setuptools to modify the matplotlib egg to add a
symlink, then it must be possible for setuptools to just put the files
there.  I just haven't figured out how to do that.

Why the change to using setuptools by default in the first place?
>

Long story.  The short story is that distutils was merged into setuptools.
 So setuptools is now the recommended way to install python packages.


>
> -Jeff
>
>
> P.S.  Note that the other mpl_toolkits are installed into the correct
> place because they are shipped with matplotlib and installed at the same
> time.  We could ship basemap with matplotlib too but it's a rather large
> download.
>
> Best wishes,
> Damon
>
> --
> Damon McDougall
> http://www.damon-is-a-geek.com
> Institute for Computational Engineering Sciences
> 201 E. 24th St.
> Stop C0200
> The University of Texas at Austin
> Austin, TX 78712-1229
>   Eric Firing 
>  July 6, 2013 12:53 AM
> If I do a clean install of mpl master, and then of basemap, basemap lands
> in dist-packages/mpl_toolkits, as it always has.  But now it is not
> found--I can't import it.  It seems that now the *real* mpl_toolkits is
> cleverly hidden inside an egg directory with a monstrous name, leaving
> basemap orphaned in a directory with no __init__.py.  As a workaround I can
> symlink it into the egg location.  I suspect the real solution will require
> basemap to use setuptools, correct?  I don't know how to do this, so I hope
> someone who does will submit a PR.
>
> Eric
>
> --
>
>
>


-- 
Damon McDougall
http://www.damon-is-a-geek.com
Institute for Computational Engineering Sciences
201 E. 24th St.
Stop C0200
The University of Texas at Austin
Austin, TX 78712-1229
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Re: [matplotlib-devel] basemap installation problem with mpl master

2013-07-06 Thread Eric Firing
On 2013/07/06 5:32 AM, Damon McDougall wrote:
>
>
>
> On Sat, Jul 6, 2013 at 1:53 AM, Eric Firing  > wrote:
>
> If I do a clean install of mpl master, and then of basemap, basemap
> lands in dist-packages/mpl_toolkits, as it always has.  But now it is
> not found--I can't import it.  It seems that now the *real* mpl_toolkits
> is cleverly hidden inside an egg directory with a monstrous name,
> leaving basemap orphaned in a directory with no __init__.py.  As a
> workaround I can symlink it into the egg location.  I suspect the real
> solution will require basemap to use setuptools, correct?  I don't know
> how to do this, so I hope someone who does will submit a PR.
>
>
> Actually, using the new setuptools isn't adequate, I just tried it
> locally on my machine and it still doesn't install itself into the
> matplotlib egg.

Thank you for giving it a try.

>
> I think the proper solution here is to add basemap as an optional
> dependency to matplotlib and have the user set a flag (off by default)
> to pull basemap if it's desired.
>
> Does that sound like a reasonable solution?

No, unfortunately.  First, because fundamentally, matplotlib is a 
dependency of basemap, not the other way around.  Second, because I want 
to be able to pull basemap from git and do the usual "setup.py build, 
setup.py install" independently of matplotlib.

It sounds like the only real solution will be for basemap to live as an 
independent package in dist-packages, and drop the mpl_toolkits umbrella 
entirely.  I don't see that it does any good anyway.  It seems 
setuptools has irretrievably broken the usefulness of mpl_toolkits as 
anything other than a place to put sub-packages that are distributed 
with mpl, and that live in the same git repo.

Moving basemap out of mpl_toolkits would also simplify the basemap 
directory structure.  I don't see any downside other than the pain of 
the transition itself, including the problem of user code needing to 
have every import of basemap handle both possible locations.

The setuptools arrangement of having mpl_toolkits hidden in an egg, but 
still imported as "import mpl_toolkits", seems like a horrible design. 
I'm also uncomfortable with the new behavior in which the standard 
command to build and install mpl triggers an avalanche of potential 
package installations.  Oh, well...

Eric

>
> P.S.  Note that the other mpl_toolkits are installed into the correct
> place because they are shipped with matplotlib and installed at the same
> time.  We could ship basemap with matplotlib too but it's a rather large
> download.
>
> Best wishes,
> Damon
>
> --
> Damon McDougall
> http://www.damon-is-a-geek.com
> Institute for Computational Engineering Sciences
> 201 E. 24th St.
> Stop C0200
> The University of Texas at Austin
> Austin, TX 78712-1229


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Re: [matplotlib-devel] basemap installation problem with mpl master

2013-07-06 Thread Thomas Kluyver
On 6 July 2013 18:20, Damon McDougall  wrote:

> Long story.  The short story is that distutils was merged into setuptools.
>  So setuptools is now the recommended way to install python packages.


*distribute*, which was a fork of setuptools, was merged into setuptools.
*distutils* is the component in the standard library, and is still there. I
still prefer distutils where possible, precisely because setuptools' eggs
are a mess.

Thomas
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Re: [matplotlib-devel] basemap installation problem with mpl master

2013-07-06 Thread Damon McDougall
On Sat, Jul 6, 2013 at 12:26 PM, Thomas Kluyver wrote:

> On 6 July 2013 18:20, Damon McDougall  wrote:
>
>> Long story.  The short story is that distutils was merged into
>> setuptools.  So setuptools is now the recommended way to install python
>> packages.
>
>
> *distribute*, which was a fork of setuptools, was merged into setuptools.
> *distutils* is the component in the standard library, and is still there. I
> still prefer distutils where possible, precisely because setuptools' eggs
> are a mess.
>

Sorry, yes.  My mistake.


>
>
> Thomas
>
>
> --
> This SF.net email is sponsored by Windows:
>
> Build for Windows Store.
>
> http://p.sf.net/sfu/windows-dev2dev
> ___
> Matplotlib-devel mailing list
> [email protected]
> https://lists.sourceforge.net/lists/listinfo/matplotlib-devel
>
>


-- 
Damon McDougall
http://www.damon-is-a-geek.com
Institute for Computational Engineering Sciences
201 E. 24th St.
Stop C0200
The University of Texas at Austin
Austin, TX 78712-1229
--
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Re: [matplotlib-devel] basemap installation problem with mpl master

2013-07-06 Thread Damon McDougall
On Sat, Jul 6, 2013 at 12:20 PM, Eric Firing  wrote:

> On 2013/07/06 5:32 AM, Damon McDougall wrote:
>
>>
>>
>>
>> On Sat, Jul 6, 2013 at 1:53 AM, Eric Firing > > wrote:
>>
>> If I do a clean install of mpl master, and then of basemap, basemap
>> lands in dist-packages/mpl_toolkits, as it always has.  But now it is
>> not found--I can't import it.  It seems that now the *real*
>> mpl_toolkits
>> is cleverly hidden inside an egg directory with a monstrous name,
>> leaving basemap orphaned in a directory with no __init__.py.  As a
>> workaround I can symlink it into the egg location.  I suspect the real
>> solution will require basemap to use setuptools, correct?  I don't
>> know
>> how to do this, so I hope someone who does will submit a PR.
>>
>>
>> Actually, using the new setuptools isn't adequate, I just tried it
>> locally on my machine and it still doesn't install itself into the
>> matplotlib egg.
>>
>
> Thank you for giving it a try.


No worries.  All I did was use matplotlib's distribute_setup.py file and
add the lines

from distribute_setup import use_setuptools
use_setuptools()

to setup.py.

I'm sure there's extra setuptools foo I need to make it play nicely with
the matplotlib egg, but I haven't at all looked into it in any detail.


>
>
>
>> I think the proper solution here is to add basemap as an optional
>> dependency to matplotlib and have the user set a flag (off by default)
>> to pull basemap if it's desired.
>>
>> Does that sound like a reasonable solution?
>>
>
> No, unfortunately.  First, because fundamentally, matplotlib is a
> dependency of basemap, not the other way around.  Second, because I want to
> be able to pull basemap from git and do the usual "setup.py build, setup.py
> install" independently of matplotlib.
>

Ah yes, that's entirely reasonable.


>
> It sounds like the only real solution will be for basemap to live as an
> independent package in dist-packages, and drop the mpl_toolkits umbrella
> entirely.  I don't see that it does any good anyway.  It seems setuptools
> has irretrievably broken the usefulness of mpl_toolkits as anything other
> than a place to put sub-packages that are distributed with mpl, and that
> live in the same git repo.
>

That's sounds reasonable to me.  But there's a part of me that can't help
thinking that what we're trying to do should be entirely possible.  Perhaps
it's more hacky, though.


>
> Moving basemap out of mpl_toolkits would also simplify the basemap
> directory structure.  I don't see any downside other than the pain of the
> transition itself, including the problem of user code needing to have every
> import of basemap handle both possible locations.
>

I'm not against having it as a separate package.  We can deprecate the old
location and remove it in 1.5.x, say.


>
> The setuptools arrangement of having mpl_toolkits hidden in an egg, but
> still imported as "import mpl_toolkits", seems like a horrible design. I'm
> also uncomfortable with the new behavior in which the standard command to
> build and install mpl triggers an avalanche of potential package
> installations.  Oh, well...


Yes, I know.  It's a mess.  Also notice that it's really hard to downgrade
to maptlotlib version 1.3.x after having installed 1.4.x, because
setuptools creates an egg for each version.  In principle this is nice as,
I assume, it offers the flexibility to switch between different matplotlib
versions on the fly.  That said, I see no way to actually do this.


>
>
> Eric
>
>
>
>> P.S.  Note that the other mpl_toolkits are installed into the correct
>> place because they are shipped with matplotlib and installed at the same
>> time.  We could ship basemap with matplotlib too but it's a rather large
>> download.
>>
>> Best wishes,
>> Damon
>>
>> --
>> Damon McDougall
>> http://www.damon-is-a-geek.com
>> Institute for Computational Engineering Sciences
>> 201 E. 24th St.
>> Stop C0200
>> The University of Texas at Austin
>> Austin, TX 78712-1229
>>
>
>


-- 
Damon McDougall
http://www.damon-is-a-geek.com
Institute for Computational Engineering Sciences
201 E. 24th St.
Stop C0200
The University of Texas at Austin
Austin, TX 78712-1229
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Re: [matplotlib-devel] basemap installation problem with mpl master

2013-07-06 Thread Jeff Whitaker
 	   
   	Thomas Kluyver  
  July 6, 2013 
11:26 AM*distribute*, which was a fork of setuptools, was 
merged into setuptools. *distutils* is the component in the standard 
library, and is still there. I still prefer distutils where possible, 
precisely because setuptools' eggs are a mess.

ThomasI
 agree eggs are a mess.   Given that it is still easy to have the old 
behavior, can someone explain why the change was made to have setup.py 
create eggs by default?  -Jeff

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 SF.net email is sponsored by Windows:Build for Windows Store.http://p.sf.net/sfu/windows-dev2dev___Matplotlib-devel
 mailing [email protected]://lists.sourceforge.net/lists/listinfo/matplotlib-devel 	   
   	Damon McDougall  
  July 6, 2013 
11:20 AMOn Sat, Jul 6, 2013
 at 11:04 AM, Jeff Whitaker 
 wrote:

 	
   

   	Damon McDougall   
   
  July 6, 2013 9:32
 AM
If
 I do a clean install of mpl master, and then of basemap, basemap
lands in dist-packages/mpl_toolkits, as it always has.  But now it is
not found--I can't import it.  It seems that now the *real* mpl_toolkits
is cleverly hidden inside an egg directory with a monstrous name,
leaving basemap orphaned in a directory with no __init__.py.  As a
workaround I can symlink it into the egg location.  I suspect the real
solution will require basemap to use setuptools, correct?  I don't know
how to do this, so I hope someone who does will submit a PR.Actually,
 using the new setuptools isn't adequate, I just 
tried it locally on my machine and it still doesn't install itself into 
the matplotlib egg.
I think the proper solution here 
is to add basemap as an optional dependency to matplotlib and have the 
user set a flag (off by default) to pull basemap if it's desired

Does that sound like a reasonable 
solution?What
 if a user decides later that he/she wants to install basemap?  Then 
they would have to reinstall matplotlib?  That doesn't sound reasonable 
to me.  Actually,
 on reflection, I'm in agreement with you.  I'm comfortable installing 
from source but this poses a larger problem when users download the 
basemap binary and expect it to Just Work.

How about having matplotlib install a symlink to the egg
 location?If 
there's a way for setuptools to modify the matplotlib egg to add a 
symlink, then it must be possible for setuptools to just put the files 
there.  I just haven't figured out how to do that.

Why the change to using setuptools by default in the 
first place?Long
 story.  The short story is that distutils was merged into setuptools. 
 So setuptools is now the recommended way to install python packages.
 
-Jeff
P.S.  Note that the other mpl_toolkits are installed into the 
correct place because they are shipped with matplotlib and installed at 
the same time.  We could ship basemap with matplotlib too but it's a 
rather large download.
Best wishes,Damon--

 Damon McDougallhttp://www.damon-is-a-geek.comInstitute

 for Computational Engineering Sciences
201 E. 24th St.Stop C0200The University of Texas at AustinAustin,

 TX 78712-1229


 	
   
   	Eric Firing   
   
  July 6, 2013 
12:53 AMIf
 I do a clean install of mpl 
master, and then of basemap, basemap 
lands in dist-packages/mpl_toolkits, as it always has.  But now it is 
not found--I can't import it.  It seems that now the *real* mpl_toolkits
 
is cleverly hidden inside an egg directory with a monstrous name, 
leaving basemap orphaned in a directory with no __init__.py.  As a 
workaround I can symlink it into the egg location.  I suspect the real 
solution will require basemap to use setuptools, correct?  I don't know 
how to do this, so I hope someone who does will submit a PR.

Eric

 
-- Damon 
McDougallhttp://www.damon-is-a-geek.comInstitute
 for Computational Engineering Sciences
201 E. 24th St.Stop C0200The University of Texas at AustinAustin,
 TX 78712-1229


 	   
   	Jeff Whitaker  
  July 6, 2013 
10:04 AM

 	   
   	Damon McDougall  
  July 6, 2013 9:32
 AMIf
 I do a clean install of mpl master, and then of basemap, basemap
lands in dist-packages/mpl_toolkits, as it always has.  But now it is
not found--I can't import it.  It seems that now the *real* mpl_toolkits
is cleverly hidden inside an egg directory with a monstrous name,
leaving basemap orphaned in a directory with no __init__.py.  As a
workaround I can symlink it into the egg location.  I suspect the real
solution will require basemap to use setuptools, correct?  I don't know
how to do this, so I hope someone who does will submit a PR.Actually, using the new setuptools isn't adequate, I just 
tried it locally on my machine and it still doesn't install itself into 
the matplotlib egg.
I think the proper solution here 
is to add basemap as an optional dependency to matplotlib and have the 
user set a flag (off by default) to pull basemap if it's desired
Does

Re: [matplotlib-devel] basemap installation problem with mpl master

2013-07-06 Thread Benjamin Root
I have managed once before to get setup tools to install a package of mine
as a directory instead of an egg, but I was never quite sure how I did that
(I accidentally tripped some sort of test by doing "foo.__file__" somewhere
in my code, I think).

In any case, isn't this the same reason why the scikit packages are now no
longer installed the way they are?

Ben Root
On Jul 6, 2013 2:00 PM, "Jeff Whitaker"  wrote:

>   Thomas Kluyver 
>  July 6, 2013 11:26 AM
>
> *distribute*, which was a fork of setuptools, was merged into setuptools.
> *distutils* is the component in the standard library, and is still there. I
> still prefer distutils where possible, precisely because setuptools' eggs
> are a mess.
>
> Thomas
>
>
> I agree eggs are a mess.   Given that it is still easy to have the old
> behavior, can someone explain why the change was made to have setup.py
> create eggs by default?
>
> -Jeff
>
>
> --
> This SF.net email is sponsored by Windows:
>
> Build for Windows Store.
>
> http://p.sf.net/sfu/windows-dev2dev
> ___
> Matplotlib-devel mailing list
> [email protected]
> https://lists.sourceforge.net/lists/listinfo/matplotlib-devel
>  Damon McDougall 
>  July 6, 2013 11:20 AM
>
>
>
> On Sat, Jul 6, 2013 at 11:04 AM, Jeff Whitaker  wrote:
>
>>  Damon McDougall 
>>  July 6, 2013 9:32 AM
>>
>>
>>
>> If I do a clean install of mpl master, and then of basemap, basemap
>>> lands in dist-packages/mpl_toolkits, as it always has.  But now it is
>>> not found--I can't import it.  It seems that now the *real* mpl_toolkits
>>> is cleverly hidden inside an egg directory with a monstrous name,
>>> leaving basemap orphaned in a directory with no __init__.py.  As a
>>> workaround I can symlink it into the egg location.  I suspect the real
>>> solution will require basemap to use setuptools, correct?  I don't know
>>> how to do this, so I hope someone who does will submit a PR.
>>
>>
>> Actually, using the new setuptools isn't adequate, I just tried it
>> locally on my machine and it still doesn't install itself into the
>> matplotlib egg.
>>
>> I think the proper solution here is to add basemap as an optional
>> dependency to matplotlib and have the user set a flag (off by default) to
>> pull basemap if it's desired
>>
>>
>> Does that sound like a reasonable solution?
>>
>>
>> What if a user decides later that he/she wants to install basemap?  Then
>> they would have to reinstall matplotlib?  That doesn't sound reasonable to
>> me.
>>
>
> Actually, on reflection, I'm in agreement with you.  I'm comfortable
> installing from source but this poses a larger problem when users download
> the basemap binary and expect it to Just Work.
>
> How about having matplotlib install a symlink to the egg location?
>>
>
> If there's a way for setuptools to modify the matplotlib egg to add a
> symlink, then it must be possible for setuptools to just put the files
> there.  I just haven't figured out how to do that.
>
> Why the change to using setuptools by default in the first place?
>>
>
> Long story.  The short story is that distutils was merged into setuptools.
>  So setuptools is now the recommended way to install python packages.
>
>
>>
>> -Jeff
>>
>>
>> P.S.  Note that the other mpl_toolkits are installed into the correct
>> place because they are shipped with matplotlib and installed at the same
>> time.  We could ship basemap with matplotlib too but it's a rather large
>> download.
>>
>> Best wishes,
>> Damon
>>
>> --
>> Damon McDougall
>> http://www.damon-is-a-geek.com
>> Institute for Computational Engineering Sciences
>> 201 E. 24th St.
>> Stop C0200
>> The University of Texas at Austin
>> Austin, TX 78712-1229
>>   Eric Firing 
>>  July 6, 2013 12:53 AM
>> If I do a clean install of mpl master, and then of basemap, basemap lands
>> in dist-packages/mpl_toolkits, as it always has.  But now it is not
>> found--I can't import it.  It seems that now the *real* mpl_toolkits is
>> cleverly hidden inside an egg directory with a monstrous name, leaving
>> basemap orphaned in a directory with no __init__.py.  As a workaround I can
>> symlink it into the egg location.  I suspect the real solution will require
>> basemap to use setuptools, correct?  I don't know how to do this, so I hope
>> someone who does will submit a PR.
>>
>> Eric
>>
>> --
>>
>>
>>
>
>
> --
> Damon McDougall
> http://www.damon-is-a-geek.com
> Institute for Computational Engineering Sciences
> 201 E. 24th St.
> Stop C0200
> The University of Texas at Austin
> Austin, TX 78712-1229
>   Jeff Whitaker 
>  July 6, 2013 10:04 AM
>
>  Damon McDougall 
>  July 6, 2013 9:32 AM
>
>
>
> If I do a clean install of mpl master, and then of basemap, basemap
>> lands in dist-packages/mpl_toolkits, as it always has.  But now it is
>> not found--I can't import it.  It seems that now the *real* mpl_toolkits
>> is cle