hdf5_1.8.12-3_i386.changes ACCEPTED into experimental, experimental
Accepted:
-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256
Format: 1.8
Date: Sat, 04 Jan 2014 19:55:21 +0100
Source: hdf5
Binary: libhdf5-7 libhdf5-7-dbg libhdf5-cpp-7 libhdf5-cpp-7-dbg libhdf5-dev
libhdf5-openmpi-7 libhdf5-openmpi-dev libhdf5-openmpi-7-dbg libhdf5-mpich-7
libhdf5-mpich2-7 libhdf5-mpich-dev libhdf5-mpich2-dev libhdf5-mpich-7-dbg
libhdf5-mpich2-7-dbg libhdf5-mpi-dev libhdf5-doc hdf5-helpers hdf5-tools
Architecture: source all i386
Version: 1.8.12-3
Distribution: experimental
Urgency: medium
Maintainer: Debian GIS Project pkg-grass-devel@lists.alioth.debian.org
Changed-By: Gilles Filippini p...@debian.org
Description:
hdf5-helpers - Hierarchical Data Format 5 (HDF5) - Helper tools
hdf5-tools - Hierarchical Data Format 5 (HDF5) - Runtime tools
libhdf5-7 - Hierarchical Data Format 5 (HDF5) - runtime files - serial versio
libhdf5-7-dbg - Hierarchical Data Format 5 (HDF5) - Debug package
libhdf5-cpp-7 - Hierarchical Data Format 5 (HDF5) - C++ libraries
libhdf5-cpp-7-dbg - Hierarchical Data Format 5 (HDF5) - C++ Debug package
libhdf5-dev - Hierarchical Data Format 5 (HDF5) - development files - serial ve
libhdf5-doc - Hierarchical Data Format 5 (HDF5) - Documentation
libhdf5-mpi-dev - Hierarchical Data Format 5 (HDF5) - development files -
default M
libhdf5-mpich-7 - Hierarchical Data Format 5 (HDF5) - runtime files - MPICH2
versio
libhdf5-mpich-7-dbg - Hierarchical Data Format 5 (HDF5) - Mpich Debug package
libhdf5-mpich-dev - Hierarchical Data Format 5 (HDF5) - development files -
MPICH ver
libhdf5-mpich2-7 - Hierarchical Data Format 5 (HDF5) - runtime files - MPICH
version
libhdf5-mpich2-7-dbg - Hierarchical Data Format 5 (HDF5) - Mpich Debug package
libhdf5-mpich2-dev - Hierarchical Data Format 5 (HDF5) - development files -
MPICH ver
libhdf5-openmpi-7 - Hierarchical Data Format 5 (HDF5) - runtime files -
OpenMPI versi
libhdf5-openmpi-7-dbg - Hierarchical Data Format 5 (HDF5) - OpenMPI Debug
package
libhdf5-openmpi-dev - Hierarchical Data Format 5 (HDF5) - development files -
OpenMPI v
Closes: 648537 721202 732202 733046
Changes:
hdf5 (1.8.12-3) experimental; urgency=medium
.
* debian/rules:
+ Simplify DEFAULT_MPI retrieval
+ Simplify build_openmpi detection depending on arch
+ Enable arch arm64 for openmpi to be consistent with debian/control
* mpich2 to mpich transition (closes: #733046):
- s/mpich2/mpich/g
- libhdf5-mpich2-* transition packages
* Introduce pkg-config files for the -dev packages
(closes: #721202, #732202).
* Install /usr/bin/h5p{c,f}c with mpi-dev packages
(closes: #648537).
Checksums-Sha1:
ff75844fe3ff784ac249ddf1b585910165d01fe7 2838 hdf5_1.8.12-3.dsc
b283c253cfd2793f6c48f42d46389a11eecd4161 107226 hdf5_1.8.12-3.debian.tar.gz
044c3ba04e0ac76eeda628be3a8b150afeeb3901 101114 libhdf5-doc_1.8.12-3_all.deb
d0dd383cbcb87f78dd8ee945a2cab0d4b3e2e71b 1085646 libhdf5-7_1.8.12-3_i386.deb
a3ae9167c381fe74e64bc1f4baf6330efb4060f7 2561730
libhdf5-7-dbg_1.8.12-3_i386.deb
3f36d1a54a7bdf7595fd99e0161e430425c8e198 106040 libhdf5-cpp-7_1.8.12-3_i386.deb
389705dfb1e0aa8fb9f7f660a4d42e9f97db2002 348128
libhdf5-cpp-7-dbg_1.8.12-3_i386.deb
7d034b5a8d54492173a7080df1a649a62605d3d5 4339036 libhdf5-dev_1.8.12-3_i386.deb
ad3e71e8603677c9f663b4db930888bb5b164ed0 1104940
libhdf5-openmpi-7_1.8.12-3_i386.deb
8e18d004445f3dc3723f1d6ac8d1a89a9b697dfe 3913744
libhdf5-openmpi-dev_1.8.12-3_i386.deb
dd587725a76710c661e39810ab525a67d43cd654 2442108
libhdf5-openmpi-7-dbg_1.8.12-3_i386.deb
ed48183f5a63f0b54c92c2e91f7d62022c152cc3 1105782
libhdf5-mpich-7_1.8.12-3_i386.deb
3156c644e0d911ebb75c37097e31ef50d27df43f 23378
libhdf5-mpich2-7_1.8.12-3_i386.deb
db92beab8bcdc10d8fe38c3b0c0e40e6de768e77 4051088
libhdf5-mpich-dev_1.8.12-3_i386.deb
c3368f42f4a1830a87dde8af9633d738918f3f07 23368
libhdf5-mpich2-dev_1.8.12-3_i386.deb
39291c226e2f01d9a488545da72d57f6e539399a 2603558
libhdf5-mpich-7-dbg_1.8.12-3_i386.deb
9cfe5a136f3c130bab722d032aea6edb682c641a 23376
libhdf5-mpich2-7-dbg_1.8.12-3_i386.deb
40c645606a8eecea413dc9dbda89fc138482de80 23386
libhdf5-mpi-dev_1.8.12-3_i386.deb
a8da8711aa3192cc438a6fd68d26b24dc98ed199 31500 hdf5-helpers_1.8.12-3_i386.deb
b596abeb3b646c68c3b0e60939593d202365b4d0 347768 hdf5-tools_1.8.12-3_i386.deb
Checksums-Sha256:
d0675340cb67c4d213f0927c6e391b5c9e35d26d027ef5d52bd6b25e8dab662a 2838
hdf5_1.8.12-3.dsc
969c817e977197f9973718edf729337baa8d57e3dbabc36ecbe1cc4e08869ccc 107226
hdf5_1.8.12-3.debian.tar.gz
821e2947290221890fe6f85aa5e2d1d0560db9ee2416bf6fe82c4289c5931a39 101114
libhdf5-doc_1.8.12-3_all.deb
46d4f3db97dba3a193bf9296b5e4e9e7270269ee37d413783595bd088186dbfb 1085646
libhdf5-7_1.8.12-3_i386.deb
8c5a984a5643dc374b06f6ddac254fda4973d8fbe1a37d5677f76a12224df20f 2561730
libhdf5-7-dbg_1.8.12-3_i386.deb
07e09e01fe5b6493815ca16ce8ba02e1ec21a9fd2c5e4afce879136ccf8708ae 106040
libhdf5-cpp-7_1.8.12-3_i386.deb
Bug#721202: marked as done (Including hdf5.h disables MPI C++ bindings)
Your message dated Mon, 06 Jan 2014 11:00:09 +
with message-id e1w07uj-0005yq...@franck.debian.org
and subject line Bug#721202: fixed in hdf5 1.8.12-3
has caused the Debian Bug report #721202,
regarding Including hdf5.h disables MPI C++ bindings
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)
--
721202: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=721202
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
---BeginMessage---
Subject: Including hdf5.h disables MPI C++ bindings
Package: libhdf5-openmpi-dev
Version: 1.8.9-1~exp3
Severity: normal
As reported in lp:1165504 [1] and discussed in bug 686926 [2],
including hdf5.h from the libhdf5-openmpi-dev package
completely disables the MPI C++ bindings. This leads to weird
errors and regressions.
For example, to reproduce:
$ cat test.cpp
#include hdf5.h // disables MPI C++ bindings
#include mpi.h
int main() {
MPI::Init();
printf(I'm %d of %d\n, MPI::COMM_WORLD.Get_rank(),
MPI::COMM_WORLD.Get_size());
MPI::Finalize();
}
$ mpicxx -o test test.cpp
test.cpp: In function ‘int main()’:
test.cpp:4:3: error: ‘MPI’ has not been declared
test.cpp:5:28: error: ‘MPI’ has not been declared
test.cpp:5:56: error: ‘MPI’ has not been declared
test.cpp:6:3: error: ‘MPI’ has not been declared
The fix for this bug is to remove 'skip_cxx_inclusion.diff' from
debian/patches/series.
The main rationale for the patch was to alleviate awkward
workarounds when compilng C++ code:
mkoctfile -DMPICH_SKIP_MPICXX=1 -DOMPI_SKIP_MPICXX=1 helloworld.cc
However, the appropriate fix would instead have been to compile
helloworld as:
CXX=mpicxx mkoctfile helloworld.cc
The mpicxx wrappers are provided for a reason, and we should
strive to encourage our users to actually _use_ them.
I hope you consider reverting the 'skip_cxx_inclusion.diff'
from debian/patches/series.
Thanks,
Brad
[1]: https://bugs.launchpad.net/ubuntu/+source/hdf5/+bug/1165504
[2]: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=686926
---End Message---
---BeginMessage---
Source: hdf5
Source-Version: 1.8.12-3
We believe that the bug you reported is fixed in the latest version of
hdf5, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 721...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Gilles Filippini p...@debian.org (supplier of updated hdf5 package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256
Format: 1.8
Date: Sat, 04 Jan 2014 19:55:21 +0100
Source: hdf5
Binary: libhdf5-7 libhdf5-7-dbg libhdf5-cpp-7 libhdf5-cpp-7-dbg libhdf5-dev
libhdf5-openmpi-7 libhdf5-openmpi-dev libhdf5-openmpi-7-dbg libhdf5-mpich-7
libhdf5-mpich2-7 libhdf5-mpich-dev libhdf5-mpich2-dev libhdf5-mpich-7-dbg
libhdf5-mpich2-7-dbg libhdf5-mpi-dev libhdf5-doc hdf5-helpers hdf5-tools
Architecture: source all i386
Version: 1.8.12-3
Distribution: experimental
Urgency: medium
Maintainer: Debian GIS Project pkg-grass-devel@lists.alioth.debian.org
Changed-By: Gilles Filippini p...@debian.org
Description:
hdf5-helpers - Hierarchical Data Format 5 (HDF5) - Helper tools
hdf5-tools - Hierarchical Data Format 5 (HDF5) - Runtime tools
libhdf5-7 - Hierarchical Data Format 5 (HDF5) - runtime files - serial versio
libhdf5-7-dbg - Hierarchical Data Format 5 (HDF5) - Debug package
libhdf5-cpp-7 - Hierarchical Data Format 5 (HDF5) - C++ libraries
libhdf5-cpp-7-dbg - Hierarchical Data Format 5 (HDF5) - C++ Debug package
libhdf5-dev - Hierarchical Data Format 5 (HDF5) - development files - serial ve
libhdf5-doc - Hierarchical Data Format 5 (HDF5) - Documentation
libhdf5-mpi-dev - Hierarchical Data Format 5 (HDF5) - development files -
default M
libhdf5-mpich-7 - Hierarchical Data Format 5 (HDF5) - runtime files - MPICH2
versio
libhdf5-mpich-7-dbg - Hierarchical Data Format 5 (HDF5) - Mpich Debug package
libhdf5-mpich-dev - Hierarchical Data Format 5 (HDF5) - development files -
MPICH ver
libhdf5-mpich2-7 - Hierarchical Data Format 5 (HDF5) - runtime files - MPICH
version
libhdf5-mpich2-7-dbg - Hierarchical Data Format 5 (HDF5) - Mpich Debug package
libhdf5-mpich2-dev - Hierarchical Data Format 5 (HDF5) - development files -
MPICH ver
libhdf5-openmpi-7 -
Bug#648537: marked as done (libhdf5-openmpi-dev lacks /usr/bin/{h5pcc,h5pfc})
Your message dated Mon, 06 Jan 2014 11:00:09 +
with message-id e1w07uj-0005ym...@franck.debian.org
and subject line Bug#648537: fixed in hdf5 1.8.12-3
has caused the Debian Bug report #648537,
regarding libhdf5-openmpi-dev lacks /usr/bin/{h5pcc,h5pfc}
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)
--
648537: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=648537
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
---BeginMessage---
Subject: libhdf5-openmpi-dev lacks /usr/bin/{h5pcc,h5pfc}
Package: libhdf5-openmpi-dev
Version: 1.8.4-patch1-2ubuntu4
Severity: normal
*** Please type your report below this line ***
None of the parallel HDF5 development packages, nor their prerequisite
packages, installs the expected compiler wrappers /usr/bin/h5pcc and
/usr/bin/h5pfc. The h5pcc and h5pfc wrappers are, however, installed
when building parallel HDF5 from the source. libhd5-openmpi-dev is one
such example but I believe the bug exists for all packages matching
libhdf5-*mpi*-dev.
If not fixed, users installing the parallel HDF5 development packages
cannot use them to compile source code without some error-prone
workarounds.
This problem is related to, but not fixed, by
http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=629157. In a similar
vein, one could add a package called hdf5-helpers-mpi containing
/usr/bin/h5pcc and /usr/bin/h5pfc and then have it be a mandatory prereq
for libhdf5-*mpi*-dev.
Another approach would be to have libhdf5-*mpi*-dev directly
install /usr/bin/h5pcc and /usr/bin/h5pfc.
Thanks for your time,
Rhys Ulerich
-- System Information:
Debian Release: wheezy/sid
APT prefers oneiric-updates
APT policy: (500, 'oneiric-updates'), (500, 'oneiric-security'),
(500, 'oneiric-proposed'), (500, 'oneiric'), (100,
'oneiric-backports')
Architecture: amd64 (x86_64)
Kernel: Linux 3.0.0-13-generic (SMP w/8 CPU cores)
Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8)
(ignored: LC_ALL set to en_US.UTF-8)
Shell: /bin/sh linked to /bin/dash
Versions of packages libhdf5-openmpi-dev depends on:
ii libhdf5-openmpi- 1.8.4-patch1-2ubuntu4 Hierarchical Data Format 5 (HDF5)
ii libjpeg62-dev 6b1-1ubuntu2 Development files for the IJG JPEG
ii libopenmpi-dev 1.4.3-2.1ubuntu1 high performance message passing l
ii zlib1g-dev 1:1.2.3.4.dfsg-3ubuntu3 compression library - development
libhdf5-openmpi-dev recommends no packages.
Versions of packages libhdf5-openmpi-dev suggests:
pn libhdf5-doc none (no description available)
-- no debconf information
---End Message---
---BeginMessage---
Source: hdf5
Source-Version: 1.8.12-3
We believe that the bug you reported is fixed in the latest version of
hdf5, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 648...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Gilles Filippini p...@debian.org (supplier of updated hdf5 package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256
Format: 1.8
Date: Sat, 04 Jan 2014 19:55:21 +0100
Source: hdf5
Binary: libhdf5-7 libhdf5-7-dbg libhdf5-cpp-7 libhdf5-cpp-7-dbg libhdf5-dev
libhdf5-openmpi-7 libhdf5-openmpi-dev libhdf5-openmpi-7-dbg libhdf5-mpich-7
libhdf5-mpich2-7 libhdf5-mpich-dev libhdf5-mpich2-dev libhdf5-mpich-7-dbg
libhdf5-mpich2-7-dbg libhdf5-mpi-dev libhdf5-doc hdf5-helpers hdf5-tools
Architecture: source all i386
Version: 1.8.12-3
Distribution: experimental
Urgency: medium
Maintainer: Debian GIS Project pkg-grass-devel@lists.alioth.debian.org
Changed-By: Gilles Filippini p...@debian.org
Description:
hdf5-helpers - Hierarchical Data Format 5 (HDF5) - Helper tools
hdf5-tools - Hierarchical Data Format 5 (HDF5) - Runtime tools
libhdf5-7 - Hierarchical Data Format 5 (HDF5) - runtime files - serial versio
libhdf5-7-dbg - Hierarchical Data Format 5 (HDF5) - Debug package
libhdf5-cpp-7 - Hierarchical Data Format 5 (HDF5) - C++ libraries
libhdf5-cpp-7-dbg - Hierarchical Data Format 5 (HDF5) - C++ Debug package
libhdf5-dev - Hierarchical Data Format 5 (HDF5) - development files - serial ve
libhdf5-doc - Hierarchical Data Format 5 (HDF5) - Documentation
libhdf5-mpi-dev - Hierarchical
Bug#733046: marked as done (hdf5: libhdf5-mpi-dev depends libhdf5-mpich-dev, not libhdf5-mpich2-dev by replacing from mpich2 to mpich)
Your message dated Mon, 06 Jan 2014 11:00:09 + with message-id e1w07uj-0005z6...@franck.debian.org and subject line Bug#733046: fixed in hdf5 1.8.12-3 has caused the Debian Bug report #733046, regarding hdf5: libhdf5-mpi-dev depends libhdf5-mpich-dev, not libhdf5-mpich2-dev by replacing from mpich2 to mpich to be marked as done. This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 733046: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=733046 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems ---BeginMessage--- Source: hdf5 Version: 1.8.11-5 Severity: important Control: found -1 1.8.12-2 Control: found -1 1.8.12-1 libhdf5-mpi-dev depends libhdf5-mpich-dev, not libhdf5-mpich2-dev by replacing from mpich2 to mpich on the ports which use mpich by mpi-default-dev_1.0.2. s390x: https://buildd.debian.org/status/fetch.php?pkg=hdf5arch=s390xver=1.8.12-2stamp=1387821930 https://buildd.debian.org/status/fetch.php?pkg=hdf5arch=s390xver=1.8.12-1stamp=1387545556 mips: https://buildd.debian.org/status/fetch.php?pkg=hdf5arch=mipsver=1.8.12-1stamp=1387557167 ppc64: http://buildd.debian-ports.org/status/fetch.php?pkg=hdf5arch=ppc64ver=1.8.12-2stamp=1387855461 http://buildd.debian-ports.org/status/fetch.php?pkg=hdf5arch=ppc64ver=1.8.12-1stamp=1387581642 http://buildd.debian-ports.org/status/fetch.php?pkg=hdf5arch=ppc64ver=1.8.11-5stamp=1387002060 This bug is brought about by substitution mistake that $(DEFAULT_MPI) becomes mpich, not mpich2 in debian/rules file. mpi-defaults_1.0.2 succeeded to be built on s390x, mips, mipsel, ppc64, m68k, hppa, which use mpich or mpich2, and on other ports (sh4, sparc64, x32), it cannot be built yet by unsatisfying build-dep of mpich, now. Regards, -- Hiroyuki Yamamoto A75D B285 7050 4BF9 AEDA 91AC 3A10 59C6 5203 04DC ---End Message--- ---BeginMessage--- Source: hdf5 Source-Version: 1.8.12-3 We believe that the bug you reported is fixed in the latest version of hdf5, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 733...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Gilles Filippini p...@debian.org (supplier of updated hdf5 package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Sat, 04 Jan 2014 19:55:21 +0100 Source: hdf5 Binary: libhdf5-7 libhdf5-7-dbg libhdf5-cpp-7 libhdf5-cpp-7-dbg libhdf5-dev libhdf5-openmpi-7 libhdf5-openmpi-dev libhdf5-openmpi-7-dbg libhdf5-mpich-7 libhdf5-mpich2-7 libhdf5-mpich-dev libhdf5-mpich2-dev libhdf5-mpich-7-dbg libhdf5-mpich2-7-dbg libhdf5-mpi-dev libhdf5-doc hdf5-helpers hdf5-tools Architecture: source all i386 Version: 1.8.12-3 Distribution: experimental Urgency: medium Maintainer: Debian GIS Project pkg-grass-devel@lists.alioth.debian.org Changed-By: Gilles Filippini p...@debian.org Description: hdf5-helpers - Hierarchical Data Format 5 (HDF5) - Helper tools hdf5-tools - Hierarchical Data Format 5 (HDF5) - Runtime tools libhdf5-7 - Hierarchical Data Format 5 (HDF5) - runtime files - serial versio libhdf5-7-dbg - Hierarchical Data Format 5 (HDF5) - Debug package libhdf5-cpp-7 - Hierarchical Data Format 5 (HDF5) - C++ libraries libhdf5-cpp-7-dbg - Hierarchical Data Format 5 (HDF5) - C++ Debug package libhdf5-dev - Hierarchical Data Format 5 (HDF5) - development files - serial ve libhdf5-doc - Hierarchical Data Format 5 (HDF5) - Documentation libhdf5-mpi-dev - Hierarchical Data Format 5 (HDF5) - development files - default M libhdf5-mpich-7 - Hierarchical Data Format 5 (HDF5) - runtime files - MPICH2 versio libhdf5-mpich-7-dbg - Hierarchical Data Format 5 (HDF5) - Mpich Debug package libhdf5-mpich-dev - Hierarchical Data Format 5 (HDF5) - development files - MPICH ver libhdf5-mpich2-7 - Hierarchical Data Format 5 (HDF5) - runtime files - MPICH version libhdf5-mpich2-7-dbg - Hierarchical Data Format 5 (HDF5) - Mpich Debug package libhdf5-mpich2-dev - Hierarchical Data Format 5 (HDF5) - development files - MPICH ver libhdf5-openmpi-7 - Hierarchical Data Format 5 (HDF5) - runtime files - OpenMPI versi libhdf5-openmpi-7-dbg - Hierarchical Data Format 5 (HDF5) - OpenMPI Debug package libhdf5-openmpi-dev - Hierarchical Data Format 5 (HDF5) - development
Bug#732202: marked as done (libhdf5-openmpi-dev: pathways for mpi.h not picked up with the linked include mpi.h)
Your message dated Mon, 06 Jan 2014 11:00:09 + with message-id e1w07uj-0005yz...@franck.debian.org and subject line Bug#732202: fixed in hdf5 1.8.12-3 has caused the Debian Bug report #732202, regarding libhdf5-openmpi-dev: pathways for mpi.h not picked up with the linked include mpi.h to be marked as done. This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 732202: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=732202 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems ---BeginMessage--- Package: libhdf5-openmpi-dev Version: 1.8.11-5 Severity: normal Dear Maintainer, I installed libhdf5-openmpi-dev to build against Field3D GPU stack and wanting to build for parallel switched from hdf5 serial to hdf5 openmpi. Result: mpi.h not found. Solution: Edit H5public.h to change the following: #include mpi.h to #include openmpi/mpi.h Not sure if this is a proper workaround, but I can cleanly build Field3D now. Sincerely, Marc J. Driftmeyer -- System Information: Debian Release: jessie/sid APT prefers unstable APT policy: (500, 'unstable'), (1, 'experimental') Architecture: amd64 (x86_64) Kernel: Linux 3.11-2-amd64 (SMP w/8 CPU cores) Locale: LANG=en_US.utf8, LC_CTYPE=en_US.utf8 (charmap=UTF-8) Shell: /bin/sh linked to /bin/bash Versions of packages libhdf5-openmpi-dev depends on: ii hdf5-helpers1.8.11-5 ii libhdf5-openmpi-7 1.8.11-5 ii libjpeg8-dev [libjpeg-dev] 8d-2 ii libopenmpi-dev 1.6.5-6 ii zlib1g-dev 1:1.2.8.dfsg-1 libhdf5-openmpi-dev recommends no packages. Versions of packages libhdf5-openmpi-dev suggests: pn libhdf5-doc none -- no debconf information -- debsums errors found: debsums: changed file /usr/include/H5public.h (from libhdf5-openmpi-dev package) ---End Message--- ---BeginMessage--- Source: hdf5 Source-Version: 1.8.12-3 We believe that the bug you reported is fixed in the latest version of hdf5, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 732...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Gilles Filippini p...@debian.org (supplier of updated hdf5 package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Sat, 04 Jan 2014 19:55:21 +0100 Source: hdf5 Binary: libhdf5-7 libhdf5-7-dbg libhdf5-cpp-7 libhdf5-cpp-7-dbg libhdf5-dev libhdf5-openmpi-7 libhdf5-openmpi-dev libhdf5-openmpi-7-dbg libhdf5-mpich-7 libhdf5-mpich2-7 libhdf5-mpich-dev libhdf5-mpich2-dev libhdf5-mpich-7-dbg libhdf5-mpich2-7-dbg libhdf5-mpi-dev libhdf5-doc hdf5-helpers hdf5-tools Architecture: source all i386 Version: 1.8.12-3 Distribution: experimental Urgency: medium Maintainer: Debian GIS Project pkg-grass-devel@lists.alioth.debian.org Changed-By: Gilles Filippini p...@debian.org Description: hdf5-helpers - Hierarchical Data Format 5 (HDF5) - Helper tools hdf5-tools - Hierarchical Data Format 5 (HDF5) - Runtime tools libhdf5-7 - Hierarchical Data Format 5 (HDF5) - runtime files - serial versio libhdf5-7-dbg - Hierarchical Data Format 5 (HDF5) - Debug package libhdf5-cpp-7 - Hierarchical Data Format 5 (HDF5) - C++ libraries libhdf5-cpp-7-dbg - Hierarchical Data Format 5 (HDF5) - C++ Debug package libhdf5-dev - Hierarchical Data Format 5 (HDF5) - development files - serial ve libhdf5-doc - Hierarchical Data Format 5 (HDF5) - Documentation libhdf5-mpi-dev - Hierarchical Data Format 5 (HDF5) - development files - default M libhdf5-mpich-7 - Hierarchical Data Format 5 (HDF5) - runtime files - MPICH2 versio libhdf5-mpich-7-dbg - Hierarchical Data Format 5 (HDF5) - Mpich Debug package libhdf5-mpich-dev - Hierarchical Data Format 5 (HDF5) - development files - MPICH ver libhdf5-mpich2-7 - Hierarchical Data Format 5 (HDF5) - runtime files - MPICH version libhdf5-mpich2-7-dbg - Hierarchical Data Format 5 (HDF5) - Mpich Debug package libhdf5-mpich2-dev - Hierarchical Data Format 5 (HDF5) - development files - MPICH ver libhdf5-openmpi-7 - Hierarchical Data Format 5 (HDF5) - runtime files - OpenMPI versi libhdf5-openmpi-7-dbg - Hierarchical Data Format 5 (HDF5) - OpenMPI Debug package libhdf5-openmpi-dev - Hierarchical Data Format 5 (HDF5) - development
Bug#721202: fixed in hdf5 1.8.12-3
reopen 721202 thanks Gilles Filippini a écrit , Le 06/01/2014 12:00: Source: hdf5 Source-Version: 1.8.12-3 We believe that the bug you reported is fixed in the latest version of hdf5, which is due to be installed in the Debian FTP archive. [snip] * Introduce pkg-config files for the -dev packages (closes: #721202, #732202). Sorry, this doesn't solve the problem at all for #721202. First I forgot to actually drop the 'skip_cxx_inclusion.diff' patch. Secondly, the actual problem is that the different flavors of libhdf5 (serial, openmpi, mpich) are not co-installable. Re-opening, and keeping thinking about it :/ Thanks, _g. ___ Pkg-grass-devel mailing list Pkg-grass-devel@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/pkg-grass-devel
Processed: Re: Bug#721202: fixed in hdf5 1.8.12-3
Processing commands for cont...@bugs.debian.org:
reopen 721202
Bug #721202 {Done: Gilles Filippini p...@debian.org} [libhdf5-openmpi-dev]
Including hdf5.h disables MPI C++ bindings
'reopen' may be inappropriate when a bug has been closed with a version;
all fixed versions will be cleared, and you may need to re-add them.
Bug reopened
No longer marked as fixed in versions hdf5/1.8.12-3.
thanks
Stopping processing here.
Please contact me if you need assistance.
--
721202: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=721202
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
___
Pkg-grass-devel mailing list
Pkg-grass-devel@lists.alioth.debian.org
http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/pkg-grass-devel
Imprimante 3D-3d printer-3D Drucker-Dual Extruder
Si vous ne souhaitez pas recevoir de nouveau cet e-mail, s'il vous plaît：désabonner maintenant Wenn Sie nicht möchten, dass diese E-Mail wieder empfangen, bitte：Jetzt abbestellen If you do not wish to receive this email again, please：Unsubscribe Now Cher Monsieur ou Madame, Nous sommes l'un des fournisseurs les plus fiables de l'imprimante 3D aux Etats-Unis, l'Europe et le Japon! Pour plus d'informations, s'il vous plaît ajouter Skype: Dekota3d, ou par courriel: dekot...@foxmail.com Vous pourrez aussi acheter directement dans notre boutique Amazon, tapez: Dekota 3d imprimante Frais de port et le devoir inclus! Affaires, à seulement 5-7 jours à arriver à votre porte! Les revendeurs sont les bienvenus! www.dekota.net amazon http://www.amazon.fr/DEKOTA-IMPRIMANTE-EXTRUDEUR-LIVRAISON-GRATUITE/dp/B00HLW7PDA/ref=sr_1_1?ie=UTF8qid=1388992292sr=8-1keywords=dekota http://www.amazon.co.uk/s/ref=nb_sb_ss_i_0_6?url=search-alias%3Dapsfield-keywords=dekota%203d%20printersprefix=dekota%2Caps%2C345rh=i%3Aaps%2Ck%3Adekota%203d%20printer Dear Sir or Madam, We are one of the most trusted 3D printer suppliers in US, Europe, and Japan! For detailed information, please add Skype: Dekota3d, Or email back to: dekot...@foxmail.com You can also buy directly in our Amazon Shop, type in: Dekota 3d printer Shipping and duty included! Only 5-7 business days to arrive at your door! Resellers are welcome! www.dekota.net If you do not wish to receive this email again, please：Unsubscribe Now Sehr geehrte Damen und Herren, Wir sind einer der am meisten vertrauenswürdige 3D-Drucker Lieferanten in den USA, Europa und Japan! Sie können auch direkt zu kaufen in unserem Amazon-Shop, geben Sie in: DEKOTA 3D Drucker Bearbeitungszeit und Versandzeit beträgt 5-7 Arbeitstage nach Zahlungseingang.___ Pkg-grass-devel mailing list Pkg-grass-devel@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/pkg-grass-devel
tilestache REMOVED from testing
FYI: The status of the tilestache source package in Debian's testing distribution has changed. Previous version: 1.31.0-1 Current version: (not in testing) Hint: http://release.debian.org/britney/hints/auto-removals Bug #725594: python-werkzeug: FTBFS: Tests failed # in python-werkzeug The script that generates this mail tries to extract removal reasons from comments in the britney hint files. Those comments were not originally meant to be machine readable, so if the reason for removing your package seems to be nonsense, it is probably the reporting script that got confused. Please check the actual hints file before you complain about meaningless removals. -- This email is automatically generated once a day. As the installation of new packages into testing happens multiple times a day you will receive later changes on the next day. See http://release.debian.org/testing-watch/ for more information. ___ Pkg-grass-devel mailing list Pkg-grass-devel@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/pkg-grass-devel
[SCM] package_template branch, master, updated. dbb60886fbc78ba0c9ae2483e76c9ee9ff28e179
The following commit has been merged in the master branch: commit 4337f7d3b21bbe84f7e2ba5278f5994e873a483d Author: Bas Couwenberg sebas...@xs4all.nl Date: Tue Jan 7 00:49:28 2014 +0100 Require at least debhelper 9.20120312 for dh_perl Multi-Arch fixes. diff --git a/debian/control b/debian/control index 878a4e7..d78f8dc 100644 --- a/debian/control +++ b/debian/control @@ -3,7 +3,7 @@ Section: science Priority: optional Maintainer: Debian GIS Project pkg-grass-devel@lists.alioth.debian.org Uploaders: Actual Maintainer maintainer_n...@debian.org -Build-Depends: debhelper (= 9) +Build-Depends: debhelper (= 9.20120312) Standards-Version: 3.9.5 Vcs-Browser: http://anonscm.debian.org/?p=pkg-grass/pkg.git;a=summary Vcs-Git: git://anonscm.debian.org/pkg-grass/pkg.git -- simple package template ___ Pkg-grass-devel mailing list Pkg-grass-devel@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/pkg-grass-devel
[SCM] package_template branch, master, updated. dbb60886fbc78ba0c9ae2483e76c9ee9ff28e179
The following commit has been merged in the master branch: commit dbb60886fbc78ba0c9ae2483e76c9ee9ff28e179 Author: Bas Couwenberg sebas...@xs4all.nl Date: Tue Jan 7 00:50:16 2014 +0100 Fix Vcs-Browser URL, use /gitweb/. diff --git a/debian/control b/debian/control index d78f8dc..6c718d8 100644 --- a/debian/control +++ b/debian/control @@ -5,7 +5,7 @@ Maintainer: Debian GIS Project pkg-grass-devel@lists.alioth.debian.org Uploaders: Actual Maintainer maintainer_n...@debian.org Build-Depends: debhelper (= 9.20120312) Standards-Version: 3.9.5 -Vcs-Browser: http://anonscm.debian.org/?p=pkg-grass/pkg.git;a=summary +Vcs-Browser: http://anonscm.debian.org/gitweb/?p=pkg-grass/pkg.git;a=summary Vcs-Git: git://anonscm.debian.org/pkg-grass/pkg.git Homepage: homepage -- simple package template ___ Pkg-grass-devel mailing list Pkg-grass-devel@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/pkg-grass-devel
[SCM] website branch, master, updated. 5fe7c640635111551ec0b11ce3562cf4844c61cd
The following commit has been merged in the master branch: commit 5fe7c640635111551ec0b11ce3562cf4844c61cd Author: Bas Couwenberg sebas...@xs4all.nl Date: Tue Jan 7 02:05:28 2014 +0100 Use packackage template when starting a new package, and various style fixes. diff --git a/policy.xml b/policy.xml index 53fc8fa..08cbaa5 100644 --- a/policy.xml +++ b/policy.xml @@ -138,7 +138,8 @@ /para para The Debian GIS team collaboration infrastructure on Alioth originates - from the initial team effort to maintain the literalgrass/literal + from the initial team effort to maintain the + ulink url=http://packages.qa.debian.org/g/grass.html;grass/ulink package. It has since grown to collaboratively maintain most GIS and OpenStreetMap source packages, but still uses the @@ -203,7 +204,7 @@ titleGive me the source!/title para To check the sources of a package (referred as -emphasislt;packagegt;/emphasis below) in our repositories, +replaceablelt;packagegt;/replaceable below) in our repositories, use the commanddebcheckout/command command, from the ulink url=http://packages.debian.org/devscripts;devscripts/ulink package. @@ -212,7 +213,7 @@ para If you are a member of Debian GIS or a Debian Developer, with account name emphasislt;usernamegt;/emphasis, - you have write permission: + you have write permission to our VCS repositories: itemizedlist listitem para @@ -236,7 +237,17 @@ /listitem listitem para - For read-only access, remove the option--user/option option. + For read-only access, remove the option--user/option option: +programlisting +commanddebcheckout/command option--git-track replaceable'*'/replaceable/option replaceablelt;packagegt;/replaceable +/programlisting +/para +para + You can configure Git to use SSH only for literalpush/literal + actions, by changing the URL: +programlisting +commandgit remote/command optionset-url/option option--push/option literalorigin/literal literalssh://replaceablelt;usernamegt;/replaceable@git.debian.org/git/pkg-grass/replaceablelt;packagegt;/replaceable.git/literal +/programlisting /para /listitem /itemizedlist @@ -359,8 +370,9 @@ pkg-grass/ literaljessie/literal, etc. /para para - This is usefull in case updates to packages in stable are made and - the master branch already uses a newer upstream release. + This is useful in case updates to packages in Debian + literalstable/literal are made and the literalmaster/literal + branch already uses a newer upstream release. Using dedicated branches for the older version in Debian named after the release codename is recommended. /para @@ -694,7 +706,7 @@ pkg-grass/ commandqemubuilder/command can be selected by setting literalBUILDER/literal to literalqemubuilder/literal. /literallayout literallayoutRoot privileges are required to run commandcowbuilder/command and commandpbuilder/command. -Use commandvisudo/command to configure commandsudo/command to use the following settings to allow replaceablelt;usernamegt;/replaceable passwordless use of commandcowbuilder/command and commandpbuilder/command. +Configure commandsudo/command with commandvisudo/command to allow replaceablelt;usernamegt;/replaceable passwordless execution of commandcowbuilder/command and commandpbuilder/command using the following settings: /literallayout programlisting Defaults! PBUILDERS setenv @@ -705,18 +717,20 @@ Cmnd_Alias PBUILDERS=/usr/sbin/pbuilder, /usr/sbin/cowbuilder # User privilege specification replaceablelt;usernamegt;/replaceable ALL=(root) NOPASSWD:PBUILDERS /programlisting - literallayoutThe default path for commandcowbuilder/command chroots is filename/var/cache/pbuilder/base-replaceablelt;distributiongt;/replaceable.cow/filename. -And for commandpbuilder/command chroots filename/var/cache/pbuilder/base-replaceablelt;distributiongt;/replaceable.tgz/filename. -/literallayout - literallayoutUse commandsudo cowbuilder/command option--create/option option--distribution=replaceablelt;distributiongt;/replaceable/option option--basepath=/var/cache/pbuilder/base-replaceablelt;distributiongt;/replaceable.cow/option to create commandcowbuilder/command chroots for specific distributions. -Use commandsudo pbuilder/command option--create/option option--distribution=replaceablelt;distributiongt;/replaceable/option option--basetgz=/var/cache/pbuilder/base-replaceablelt;distributiongt;/replaceable.tgz/option when using commandpbuilder/command instead. -/literallayout - literallayoutThe
Re: Bug #733381: gpx2shp: FTBFS: geod_set.c:32:2: error: too few arguments to function 'pj_ell_set'
Petter, happy new year. OK, I will make the sid environment and check the bug. Thank you for the information. Petter Reinholdtsen p...@hungry.comさん： Hi, and happy new year. Hope you are doing well. :) Did you notice URL: http://bugs.debian.org/733381 , a bug report about gpx2shp failing to build with the current libraries in Debian? Do you have any ideas how to fix it? Details about the Debian package can be found on URL: http://packages.qa.debian.org/g/gpx2shp.html -- Happy hacking Petter Reinholdtsen HIRAOKA, Toshihiro AzukiMap K.K. 6F 3-12-4 Uchi-Kanda, Chiyoda-ku, Tokyo, JAPAN 101-0047 e-mail: hira...@azukimap.jp ___ Pkg-grass-devel mailing list Pkg-grass-devel@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/pkg-grass-devel
