[rkward-devel] rkward: 'No (valid) plugins found', therefore no menu items

2008-10-29 Thread stfs
Anyone know about this problem?

https://bugs.launchpad.net/ubuntu/+source/rkward/+bug/272527



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[rkward-devel] Dear devel list: rkward is broken in Ubuntu Intrepid - what can we do?

2008-11-08 Thread stfs
Dear devel list
There have been a lot of reports about problems installing rkward in 
intrepid. It is also announced in a message on the R site (under the 
instructions on how to add the R repository to your ubuntu installation).

I'm right now in the process of installing rkward on a new intrepid 
installation - and will probably get there today or tomorrow.

In my opinion rkward is the best interface to R and a lot of people are 
beginning to depend on it. Therefore I believe it is very important to 
ensure it doesn't suddenly fall behind.

I don't know how to deal with this problem and I am not a programmer 
myself but I'm interested in finding a solution.

Best regards
Finn

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Re: [rkward-devel] looking for startup script under openSUSE

2008-11-12 Thread stfs

Hi Horace
I'm not a developer ;) try 'whereis rkward' in the console
Finn


On 2008-11-11 23:15, Detlef Steuer wrote:

On Tue, 11 Nov 2008 12:23:50 -0800
Horace Tso <[EMAIL PROTECTED]> wrote:

  

Dear Finn and other developers,

I've just looked up /usr/local/bin/ but found no startup script as you 
suggested. For OpenSUSE and the like, can you please suggest other possible 
locations?

When I search for "rkward" as root, I found the followings,

opt/kde3/bin/rkward


^^^
That one should be what you are looking for.

detlef 



  

opt/kde3/share/apps/
opt/kde3/share/doc/HTML/en/
usr/lib64/R/library/
usr/lib64/R/library/rkward/R/

Thanks in advance.

Horace Tso

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From: stfs [mailto:[EMAIL PROTECTED]
Sent: Tuesday, November 11, 2008 11:35 AM
To: Horace Tso
Subject: Re: [rkward-devel] questions on RKWard

Hi Horace
Firstly, it may be better to ask help questions on the help list.
To your question. Try getwd() to see where the workspace is located, then go 
hunting there for something that looks like a workspace.
When R starts it looks for an existing workspace in the current folder and 
perhaps somewhere else (?). Every time you close R it will ask to save the 
workspace.

About startup arguments, the startup script is '/usr/local/bin/rkward' (at 
least on Ubuntu). You may find the upstart command in there and change it.

I'm also extremely pleased with rkward - I think it could be a major selling 
point to universities and others who need a professional and accessible 
statistical package.

Best regards
Finn

On 2008-11-10 18:57, Horace Tso wrote:
Finn, yes indeed I meant workspace. The original problem was, a mysterious 
workspace is loaded every time I launch Rkward. I don't want that workspace, 
but there is no way to tell Rkward not to load it.

I figured out a trick over the weekend, which may be non-standard but it works 
just fine for me. Right now, I have an icon created for Rkward on the KDE panel 
(ie, the bar at the bottom of the screen, kind of like Windows' Quick Launch) 
so that I could launch by clicking the icon. I was able to right-click it and 
choose Properties. In Properties, there is a field where I could tell it where 
to start. By default, it's left blank. When i specify a folder, the mysterious 
workspace is no longer loaded.

Still, a question for you : is there any way to tell Rkward the usual 
command-line options, such as --no-restore, --no-site-file, etc.

Thank you for responding.

Horace

PS. So far Rkward has worked out quite well for me. I'm looking forward to the 
next release.



From: stfs [mailto:[EMAIL PROTECTED]
Sent: Saturday, November 08, 2008 2:23 AM
To: Horace Tso
Cc: [EMAIL PROTECTED]<mailto:[EMAIL PROTECTED]>
Subject: Re: [rkward-devel] questions on RKWard

Hi Horace
I suppose by 'image' you mean the workspace ?

If that's the case it always has to run in a workspace thus creating one in 
memory if you don't choose one yourself.

You may want to go into 'Settings > RKWard Settings > General' and change 
'Startup Actions'.

If, on the other hand, you are referring to a graph (ie. bargraph etc.) that 
you made in an earlier session this comes from the the .rkward folder in your 
home folder (ie. ~/.rkward)
There is an option to reset output in the edit menu (if the output window is 
active)

Regards
Finn





On 2008-11-05 23:34, Horace Tso wrote:
Folks,

I'm making progress moving from Windows to Linux and have RKward up and 
running. I read somewhere that Rkward's supposed to be the Tinn-R for linux and 
Tinn-R has worked out great for me. So naturally I'd like to do the following, 
if possible,

1. How to ask Rkward not to load the last saved image. Right now whenever it 
starts, it loads an image from some obscure corner of my directory. I can't 
quite figure out where it gets that image from. On the command line, I can do 
--no-restore. But there seems to be no place to sneak in these command line 
options under Rkward.  A startup config file hidden somewhere?

2. Customize CTRL-keys. Just out of the box, many menu options do not have a 
control key associated with them. Any way to pick my favorite key?

3. I'm used to typing ?command on the R-console and get a HTML help page pops 
up. But when I do that, a shockingly large window comes up and complains in 
many words about some error which I can't quite figure out what it's saying 
(sorry don't have linux in front of me right now).

4. I see there is an 'Output' tab by default. But command results are sent to 
R-console, and nothing seems to happen in 'Output'.

I have R 2.7.1 running under KDE on openSUSE 10.3.

TIA.

Horace



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Re: [rkward-devel] Getting ready to release RKWard 0.5.0c - Call for testing

2009-03-26 Thread stfs

Hi
I'm following the list, but not a developer, just let me know if it is 
not appropriate for me to post.


I have installed successfully with no errors on ubuntu 8.10 Gnome (with 
kdelibs5-dev 4.2.0-0ubuntu2-intrepid2)
I installed it over the former 0.5.0 version. When I start from command 
line it spews a bunch of what appears to be warnings about KAction

(is this a conflict of shortcuts?) like this:

rkward(16804): Shortcut for KAction  "window_show_workspace" "Show/Hide 
Workspace Browser" set with QShortcut::setShortcut()! See KAction 
documentation.


And when the rkward is running, loading a new workspace produces a set 
of warnings like this:


rkward(19203): Shortcut for KAction  "interrupt" "Interrupt running 
command" set with QShortcut::setShortcut()! See KAction documentation.

Calling appendChild() on a null node does nothing.
rkward(19203): Shortcut for KAction  "runblock0" "1 (Unused)" set with 
QShortcut::setShortcut()! See KAction documentation.
rkward(19203): Shortcut for KAction  "runblock1" "2 (Unused)" set with 
QShortcut::setShortcut()! See KAction documentation.

...
...
rkward(19203): Error parsing XML document: "tag mismatch" at line 24 
column 11



Regards
Finn

On 2009-03-25 21:48, Thomas Friedrichsmeier wrote:

Hi all,

if a reminder was needed, today my mailbox had two further hints to finally 
get going with a new release.


Firstly, two people pointed out that we had an embarassing crash-problem with 
the upcoming R 2.9. I hope to have fixed that.


Secondly, the German c't magazine is asking for permission to include RKWard 
on a covermount DVD-ROM. They say RKWard has been pre-selected to be included 
in this collection of free and shareware programs. Not sure 
what "pre-selected" means, whether all they still need is our consent (which 
I strongly intend to give), or whether they will do some further 
post-selecting after that. However, c't really is a pretty renowned IT 
magazine in Germany, and looking for developers to help in our project, a 
paragraph or two in c't might be just the sort of publicity we need to get 
forward. --- Well, giving them explicit permission to distribute under the 
GPL is a no-brainer. The other part is getting RKWard into a presentable 
state. c't is asking for feedback until April 1st. So:


I've created a new test version 0.5.0c-test1, available in source and 
i386 .deb from http://rkward.sourceforge.net/temp/ (or from SVN). Note that 
I'll only take care of a KDE 4 release, right now. A KDE 3 release of all our 
fixes will follow (0.4.9b), but that's not my priority.


If you've been following SVN, recently, you've seen all but the most recent 
changes, already. So although releasing before April 1st could probably best 
be called "sudden", I think we really are in pretty good shape to rush it 
this much. Still I would like to ask you to download 0.5.0c-test1 and


1. test everything you care about once more
	- Especially, if you have a chance to test on Ubuntu, and with combinations 
of KDE and R other than KDE 4.2.1 and R 2.9, that would be great.

2. remind me of important issues that still need fixing.

Two things that are not yet included in the test1 release:
1. The German translation update provided by Jannis. I'll wait until Stefan 
has given it a look (go ahead and commit to SVN, when ready).
2. The item response theory plugins by Meik. Are those fit to be included in 
the "official" pluginmap? In whole, or only partially?


I would very much like to rush the release, in order to meet the April 1st 
deadline. Since my own time schedule is hairy as well, that means I need all 
substantial feedback before Monday morning. So, please, if you can find the 
time, take a look until then.


Regards
Thomas
  



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Re: [rkward-devel] Getting ready to release RKWard 0.5.0c - Call for testing

2009-03-27 Thread stfs



On 2009-03-26 22:18, Thomas Friedrichsmeier wrote:
  

rkward(19203): Error parsing XML document: "tag mismatch" at line 24
column 11



Can you pin-point where precisely this last one comes from? Probably a 
specific help-page in your workspace. Can you identify, which one?


  
The error is gone now, you are probably right it is related to a 
specific help page.


Most of the warnings were related to a mixup of earlier and current 
settings, I had several paths to different pluginmaps that conflicted or 
were obsolete. This happened because of the initial troubles with 
installing rkward in ubuntu 8.10. I cleaned them out and things look a 
lot nicer now.





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Re: [rkward-devel] Getting ready to release RKWard 0.5.0c - Call for testing

2009-03-27 Thread stfs



On 2009-03-26 22:18, Thomas Friedrichsmeier wrote:

Hi,

  

I'm following the list, but not a developer, just let me know if it is
not appropriate for me to post.



everything concering RKWard development is welcome on this list. No need to CC 
me, when writing to the list, though.


  

I installed it over the former 0.5.0 version. When I start from command
line it spews a bunch of what appears to be warnings about KAction
 (is this a conflict of shortcuts?) like this:

rkward(16804): Shortcut for KAction  "window_show_workspace" "Show/Hide
Workspace Browser" set with QShortcut::setShortcut()! See KAction
documentation.



I've seen these, but they appear to be harmless, and so I'll ignore these 
messages for this release. We'll deal with this when there is more time to 
check for unexpected side-effects.


  

rkward(19203): Error parsing XML document: "tag mismatch" at line 24
column 11



Can you pin-point where precisely this last one comes from? Probably a 
specific help-page in your workspace. Can you identify, which one?


Regards
Thomas
  

An update - I researched further
First to make it clear I use ubunt 8.10 Desktop, 32bit and R 2.8.1
I just installed rkward rev2416. I didn't see any obvious differences 
0.5.0c-test1 so I assume these errors are the same as before.


#These warnings occur when opening a r-source file (I'm aware they are 
harmless):


rkward(10522): Shortcut for KAction  "runblock0" "1 (Unused)" set with 
QShortcut::setShortcut()! See KAction documentation.
rkward(10522): Shortcut for KAction  "runblock1" "2 (Unused)" set with 
QShortcut::setShortcut()! See KAction documentation.
rkward(10522): Shortcut for KAction  "runblock2" "3 (Unused)" set with 
QShortcut::setShortcut()! See KAction documentation.
rkward(10522): Shortcut for KAction  "runblock3" "4 (Unused)" set with 
QShortcut::setShortcut()! See KAction documentation.
rkward(10522): Shortcut for KAction  "runblock4" "5 (Unused)" set with 
QShortcut::setShortcut()! See KAction documentation.
rkward(10522): Shortcut for KAction  "runblock5" "6 (Unused)" set with 
QShortcut::setShortcut()! See KAction documentation.



#These errors/warnings happen when I choose to 'edit' an object (ie. 
open it in the data grid):


#This happens immediately when right clicking the object
Calling appendChild() on a null node does nothing.

#This happens when it opens
rkward(10522): Error parsing XML document: "tag mismatch" at line 24 
column 11


#this happens again immediately after opening
Calling appendChild() on a null node does nothing.


Another thing happens that is really strange:
If I choose to open a another existing workspace either via

Workspace > Open Recent
or
Workspace > Open

All open r-sorce files and open help pages are kept open which get the 
old and the new project mixed up. This also happens when I open the 
current workspace (ie. open it again when it's already open) such that 
all open files and help files are duplicated.


Regards
Finn
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Re: [rkward-devel] RKWard 0.5.0c testing, ubuntu intrepid

2009-03-28 Thread stfs
I have tested this too, on a completely fresh ubuntu 8.10 desktop 32bit 
Gnome with standard R (2.8.1)
The deb package is generated without errors but a bunch of warnings 
(mostly compiler warning I think) that don't seem to influence functioning.


The deb-package installs without any problems.

I start it from console and there are no errors, menus appear to be 
working. Only, the icon is missing both from the menu and from the 
application switcher.


I have an extra laptop sitting around so I have set up a test machine 
with ubuntu 8.10, I could set up other configurations if you would like 
that.


Regards
Finn

On 2009-03-27 22:33, Thomas Friedrichsmeier wrote:

Hi,

thanks for your report(s).

Most of the symptoms you detail likely have a common cause: Some parts of 
RKWard get installed to a wrong location, and then they can't be found at 
runtime. The problem here is, that the correct paths differ across systems. 
Since don't have a Ubuntu installation myself, I have a hard time, figuring 
out the correct approach.


I created a new test release and corresponding .deb a minute ago. It is to be 
expected that the .deb still does not work for you, though, since it was 
built for Debian unstable.


Could you please try the following steps, and write back on the results:

In your /etc/apt/sources.list add this line:
deb-src http://rkward.sourceforge.net/debian ./
Now go to a temporary directory and enter:
apt-get source rkward
This should pull you the 0.5.0c-test3 sources and build scripts. Then:
sudo apt-get build-dep rkward
This will install everything needed to compile. Two additional ones:
sudo apt-get install dpkg-dev
sudo apt-get install fakeroot
These are needed to create debian packages. Now inside your temporary 
directory:

cd rkward-0.5.0c-test3
dpkg-buildpackage -rfakeroot
Now your temporary directory (cd ..) should contain a .deb built for your 
system. Install that and test.


I know it's a number of steps, but this would really help a lot.

If the problem about missing plugins remains, could you finally go to 
~/.kde4/share/config/ and remove/rename the "rkwardrc" file? Does this help?


Regards
Thomas
  



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Re: [rkward-devel] RKWard 0.5.0c-test5

2009-03-29 Thread stfs


On 2009-03-29 21:57, Thomas Friedrichsmeier wrote:
> Hi all,
>
> many thanks for all your testing efforts so far. While I'm deferring many of 
> the reported issues to the time after the release, I'm starting to feel 
> confident that we've found and fixed the most serious showstoppers.
>
> I've just prepared a -test5 release, available at http://rkward.sf.net/temp/ 
> . 
> If you've tested some of the previous -test releases, you will not find too 
> many differences, but it would still be nice, if you could make sure, the 
> installation and basic features continue to work.
>
> Barring further grave problems, I'll try to roll up the final release on 
> Monday or Tuesday.
>
> Regards
> Thomas
I tested it on ubuntu 8.10 32bit Desktop (both on my production machine 
and a vanilla installation). Everything appears to be working - it 
really works like a charm :)

Regards
Finn

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Re: [rkward-devel] RKWard 0.5.0c-test5

2009-03-30 Thread stfs



On 2009-03-30 11:34, meik michalke wrote:

hi finn,

am Montag, 30. März 2009 (11:16) schrieb stfs:
  

It complains that it can't find kde4-config.



yes, i guess that's because the kde4 binaries are not in path by default. to 
compile rkward on ubuntu 8.04 you must

 export PATH=$PATH:/usr/lib/kde4/bin
first, then kde4-config will be found and package building should work.


viele grüße :: m.eik
  

Compiling now works. I compiled again into a .deb package and from svn.
Everything now works but there may be a problem with the .deb that I 
will try to explain.


I first installed it the '.deb' way (ie. making the deb and double click 
it).
Rkward could be started from command line but not from menu. Menu had no 
icon.

I believe the reason is that /usr/local/bin/rkward does not exist.

Then I installed from source. Rkward could now be started from menu (and 
still from command line).
Menu still had no icon (Perhaps some setting is cached by the system or 
not overwritten as it should).


Then I deleted the menu because I thought if it was missing it would be 
reinstalled. It didn't help now the menu was completely missing and it 
didn't turn up when installing.
Finally I found the 'deleted' menu as an xdg-file in 
~/.local/share/applications/ as soon as I deleted it from there it 
turned up in the menu with an icon and working too.


Right now I think there may be a problem with the .deb (it does not 
appear to create /usr/local/bin/rkward).

This file was created by source install instead.

Regards
Finn
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Re: [rkward-devel] RKWard 0.5.0c-test5

2009-03-30 Thread stfs



On 2009-03-30 01:10, meik michalke wrote:

am Sonntag, 29. März 2009 (23:40) schrieb meik michalke:
  

i have built a .deb for hardy including that small fix:
 o http://reaktanz.de/stuff/R/rkward_0.5.0c-test5-1~hardy1_i386.deb



... and used dpatch to create a diff file to build the .deb from 
the .orig.tar.gz sources:

 o http://reaktanz.de/stuff/R/rkward_0.5.0c-test5-1~hardy1.diff.gz

this adds dpatch to the build dependencies (only for hardy, though), but makes 
changes for one distro easy and obvious, since they all end up in the 
debian/patches directory. if there are other hardy users out there, i'd 
appreciate some testing, if that's ok...



viele grüße :: m.eik
  

Hi
I just set up a test machine with hardy 8.04.2 Desktop 32bit, R 2.8.1 
and tested it. It complains that it can't find kde4-config.


I have tried two methods and get essential the same error

I have pulled the source from svn

And I tried the method Thomas described earlier (making a deb package):


Could you please try the following steps, and write back on the results:

In your /etc/apt/sources.list add this line:
deb-src http://rkward.sourceforge.net/debian ./
Now go to a temporary directory and enter:
apt-get source rkward
This should pull you the 0.5.0c-test3 sources and build scripts. Then:
sudo apt-get build-dep rkward
This will install everything needed to compile. Two additional ones:
sudo apt-get install dpkg-dev
sudo apt-get install fakeroot
These are needed to create debian packages. Now inside your temporary 
directory:

cd rkward-0.5.0c-test3
dpkg-buildpackage -rfakeroot
Now your temporary directory (cd ..) should contain a .deb built for your 
system. Install that and test.
  


Regards
Finn
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Re: [rkward-devel] RKWard 0.5.0c-test5

2009-03-30 Thread stfs



On 2009-03-30 15:08, meik michalke wrote:

hi finn,

thanks for looking after it!

Am Montag 30 März 2009 13:11:02 schrieb stfs:
  

Compiling now works.



that's a relief :-)

  

I first installed it the '.deb' way (ie. making the deb and double click
it).
Rkward could be started from command line but not from menu. Menu had no
icon.
I believe the reason is that /usr/local/bin/rkward does not exist.



if you're looking for something to be installed in /usr/local i wonder how you 
created the .deb package? did you use the diff i created for hardy?

 o http://reaktanz.de/stuff/R/rkward_0.5.0c-test5-1~hardy1.diff.gz
   (see below how to apply it)

what does the command "which rkward" return?
  

immediately after the .deb install it returned nothing.
After source install it returned /usr/local/bin/rkward
in general, if you compile software from source via make or something similar, 
it usually gets installed in /usr/local/(bin|share|lib...), to not mess up the 
distribution's installation (i.e. overwriting files that belong to a package, 
"make install" will not warn you if it does so). official distribution 
packages on the other hand usually install to /usr/(bin|share|lib...), so do 
the .deb packages thomas is providing. moreso, a .deb should *not* install to 
/usr/local, to not overwrite your own compiled programs. you could say, 
everything in /usr/local is your personal playground, and debian packages 
should stick to /usr instead.


the trouble especially with ubuntu 8.04 is that rkward 0.5.0 is a kde4 
application, and that this version of ubuntu expects the installation of all 
kde4 stuff to /usr/lib/kde4/(bin|share|lib...) -- that's why you had to add 
that to your PATH prior to compilation, because it is not a common path... 
(ubuntu 8.10 puts everything in /usr again, so we're not in any path trouble 
there).


alltogether, you should look for the rkward binary in /usr/lib/kde4/bin, and 
check if the menu entry tries to start /usr/lib/kde4/bin/rkward (with full 
path). this actually should be accomplished by the diff above:


 - get rkward_0.5.0c-test5.orig.tar.gz from
   http://rkward.sourceforge.net/temp/
 - get rkward_0.5.0c-test5-1~hardy1.diff.gz from above
 - tar xzvf rkward_0.5.0c-test5.orig.tar.gz
 - cd rkward_0.5.0c-test5
 - zcat ../rkward_0.5.0c-test5-1~hardy1.diff.gz | patch -p1
 - chmod a+x debian/rules
 - export PATH=$PATH:/usr/lib/kde4/bin
 - fakeroot dpkg-buildpackage -b -D
 - dpkg -i ../rkward_0.5.0c-test5-1~hardy1_i386.deb

have you tried to install the precompiled ubuntu .deb yet?
 o http://reaktanz.de/stuff/R/rkward_0.5.0c-test5-1~hardy1_i386.deb
  
After uninstalling everything rkward and deleting everything with rkward 
in it I tried but it says

'Dependency is not satisfiable: kdelibs5'

Tried
"apt-get install kdelibs5*"
but get a host of unmet dependencies

The deb made from Thomas' instructions installs but is showing the same 
problem as before:

It wants to launch 'rkward' but finds nothing and has no icon.

'which rkward' returns nothing

rkward will not start from menu or command line
(the reason it starts from command line for some is, of course, that 
they use the same console they used to compile so the path contains 
"/usr/lib/kde4/bin")


Starting it directly with "/usr/lib/kde4/bin/rkward" seems to be 
working. No complaints and everything seems ok.


  

Finally I found the 'deleted' menu as an xdg-file in
~/.local/share/applications/ as soon as I deleted it from there it
turned up in the menu with an icon and working too.



whenever you change a menu setting, a local copy with those changes will be 
createrd in ~/.local/share/applications/, which will then be used instead of 
the system files. please make sure that there isn't any rkward file left here 
to test if the system wide installation works.


  

Right now I think there may be a problem with the .deb (it does not
appear to create /usr/local/bin/rkward).



as explained above, it's not supposed to ;-)

  

This file was created by source install instead.



which is correct, but not for the .deb file. could you give the precompiled 
version another try or test the compilation as described above?



viele gruesse :: m.eik

  


Thanks for all the infomation and know that I, as a user, is deeply 
greatfull for the work you and the other devs are doing.


Regards
Finn
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Re: [rkward-devel] RKWard 0.5.0c-test5

2009-03-30 Thread stfs



On 2009-03-30 22:46, meik michalke wrote:

hi finn,

[btw, answering to the list is sufficient.]
  
Sorry, I usually hit the "reply all" (when list address is cc) and 
delete non-list addresses, just didn't think about it for a few posts.

am Montag, 30. März 2009 (16:55) schrieb stfs:
  

what does the command "which rkward" return?
 
  

immediately after the .deb install it returned nothing.



which is to be expected because of the PATH issue. it should appear after 
doing the export thing. this is normal.


  

After source install it returned /usr/local/bin/rkward



so /usr/local/bin is in your PATH.

  

After uninstalling everything rkward and deleting everything with rkward
in it I tried but it says
'Dependency is not satisfiable: kdelibs5'



that's odd -- thomas' package too should have the same dependency. this 
package contains the "core libraries for all KDE 4 applications", so it *has* 
to be installed for any kde 4 app to run, hasn't it? was it perhaps 
uninstalled by accident?


  
I get the same in ubuntu intrepid 8.10 with the 'sid' .deb package 
(0.5.0c release)  Thomas just announced. When I create it locally it 
works fine (except for minor issue below).


I also (this is my work machine and must function) have the 
source-install which responds to 'which' and is found first in the path.

'whereis rkward' gives me
/usr/bin/rkward
/usr/bin/rkward.bin
/usr/local/bin/rkward
/usr/local/bin/rkward.bin
/usr/share/man/man1/rkward.1.gz

When I start rkward explicitly with '/usr/bin/rkward' it complains about 
missing plugins (the 'Plugins are needed' dialog) but it is fully 
functional and the pluginmap can be located via the menu.

Tried "apt-get install kdelibs5*" but get a host of unmet dependencies



try "apt-get install kdelibs5" and install everything it depends on. (to 
install a *full* kde 4 desktop try "apt-get install kde4")


  
It was already done (both regular and devel) - there were no obvious 
missing things. I suspect it is something to do with differences between 
Debian and ubuntu. That step actually ended in a broken rkward package I 
had to remove.

rkward will not start from menu or command line
(the reason it starts from command line for some is, of course, that
they use the same console they used to compile so the path contains
"/usr/lib/kde4/bin")

Starting it directly with "/usr/lib/kde4/bin/rkward" seems to be
working. No complaints and everything seems ok.



i think we're half way through. it seems as if everything is as it should be, 
looking through ubuntu 8.04 glasses -- except for your menu entry. i can only 
assume that it wasn't patched. (which is the only difference between thomas' 
and my diff)


i've asked a collegue of mine to test the package as well, he's running 8.04, 
too.


  

Thanks for all the infomation and know that I, as a user, is deeply
greatfull for the work you and the other devs are doing.



thanks, that's nice :*)


viele grüße :: m.eik

  

Regards
Finn
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Re: [rkward-devel] RKWard 0.5.0c-test5

2009-04-01 Thread stfs


On 2009-04-01 15:59, meik michalke wrote:
> hi,
>
> finally, this hardy package should behave as intended:
>  o http://reaktanz.de/stuff/R/rkward_0.5.0c-1~hardy1_i386.deb
>
>  o http://reaktanz.de/stuff/R/rkward_0.5.0c-1~hardy1.diff.gz
>  o http://reaktanz.de/stuff/R/rkward_0.5.0c-1~hardy1_i386.changes
>
> i have dropped the parallel installation attempt, after i ran from one 
> problem 
> into another (overwriting man pages and the like). so you can either install 
> the kde 3 version *or* this new package.
>
> i've built and tested it on the kubuntu 8.04 qemu image i created yesterday 
> (R 
> 2.6.2, kde 4.0.3, everything left to default, just the needed packages 
> installed from the preconfigured repos). it installed without problems and 
> starts from menu and console (if called with full path).
>
> thanks a lot to finn for testing several times and giving valuable feedback. 
> as he poited out, 8.04 is marked "long term support", so despite all issues 
> we 
> shouldn't forget about it.
>
>
> viele gruesse :: m.eik
>
>   
Hi
I have now tested your new package on hardy. After installing it gives 
this error:

/usr/lib/kde4/bin/rkward.bin: error while loading shared libraries: 
libRlapack.so: cannot open shared object file: No such file or directory

I then created a symlink to '/usr/lib/r/lib/libR.so' called 'libRlapack.so'

sudo ln -s /usr/lib/r/lib/libR.so /usr/lib/r/lib/libRlapack.so

Now everything seems to work


Regards
Finn

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Re: [rkward-devel] RKWard 0.5.0c-test5

2009-04-01 Thread stfs



On 2009-04-01 20:41, stfs wrote:

On 2009-04-01 15:59, meik michalke wrote:
  

hi,

finally, this hardy package should behave as intended:
 o http://reaktanz.de/stuff/R/rkward_0.5.0c-1~hardy1_i386.deb

 o http://reaktanz.de/stuff/R/rkward_0.5.0c-1~hardy1.diff.gz
 o http://reaktanz.de/stuff/R/rkward_0.5.0c-1~hardy1_i386.changes

i have dropped the parallel installation attempt, after i ran from one problem 
into another (overwriting man pages and the like). so you can either install 
the kde 3 version *or* this new package.


i've built and tested it on the kubuntu 8.04 qemu image i created yesterday (R 
2.6.2, kde 4.0.3, everything left to default, just the needed packages 
installed from the preconfigured repos). it installed without problems and 
starts from menu and console (if called with full path).


thanks a lot to finn for testing several times and giving valuable feedback. 
as he poited out, 8.04 is marked "long term support", so despite all issues we 
shouldn't forget about it.



viele gruesse :: m.eik

  


Hi
I have now tested your new package on hardy. After installing it gives 
this error:


/usr/lib/kde4/bin/rkward.bin: error while loading shared libraries: 
libRlapack.so: cannot open shared object file: No such file or directory


I then created a symlink to '/usr/lib/r/lib/libR.so' called 'libRlapack.so'

sudo ln -s /usr/lib/r/lib/libR.so /usr/lib/r/lib/libRlapack.so

Now everything seems to work

  

UPS: Should have been capital 'R':

I then created a symlink to '/usr/lib/R/lib/libR.so' called 'libRlapack.so'

sudo ln -s /usr/lib/R/lib/libR.so /usr/lib/R/lib/libRlapack.so



Regards
Finn

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Re: [rkward-devel] Rkward crashes on Fedora

2009-04-21 Thread stfs

Hi
I'm seeing a crash in ubuntu 8.10 now after updating to R2.9 with rkward 
0.5c (the deb package I built locally) after a svn-source install 
(/usr/local/bin) it works fine again.


I have done the tests suggested by Thomas on the good and the bad 
version and can send the output it they are still needed.


Regards
Finn

On 2009-04-20 12:57, Pierre-Yves wrote:

On Fri, 2009-04-17 at 23:15 +0200, Thomas Friedrichsmeier wrote:
  

Hi Pierre,

On Wednesday 15 April 2009, Pierre-Yves wrote:


Do you have by any change an idea to solve it ?
  
I have no good idea on why this is happening. Perhaps one of these pointers 
will provide a useful cue to work with:


1. The symbol "_ZNK7QString11lastIndexOfER7QRegExpi" should be in Qt. More 
precisely in libQtCore.so . You can run something like

strings /usr/lib/libQtCore.so | grep "lastIndexOf"
to verify it really exists (with that precise name).

Interestingly, here (on Debian), the symbol is 
called "_ZNK7QString11lastIndexOfERK7QRegExpi". That's real close, but note 
the missing "K".




@pingouLab ~]$ strings /usr/lib64/libQtCore.so | grep "lastIndexOf"
_ZNK10QByteArray11lastIndexOfEci
_ZNK10QByteArray11lastIndexOfERKS_i
_ZNK7QString11lastIndexOfE5QChariN2Qt15CaseSensitivityE
_ZNK7QString11lastIndexOfERK7QRegExpi
_ZNK7QString11lastIndexOfERKS_iN2Qt15CaseSensitivityE
_ZN9QtPrivate23QStringList_lastIndexOfEPK11QStringListRK7QRegExpi

On the computer where rkward crashes (after installing qt-devel)
@pingouRed ~]$ strings /usr/lib/libQtCore.so | grep "lastIndexOf"
_ZNK10QByteArray11lastIndexOfEci
_ZNK10QByteArray11lastIndexOfERKS_i
_ZNK7QString11lastIndexOfE5QChariN2Qt15CaseSensitivityE
_ZNK7QString11lastIndexOfERK7QRegExpi
_ZNK7QString11lastIndexOfERKS_iN2Qt15CaseSensitivityE
_ZN9QtPrivate23QStringList_lastIndexOfEPK11QStringListRK7QRegExpi


  

1b. Running
strings /path/to/rkward.bin | grep "lastIndexOf"
should contain that precise string as well.




I have some weird results here:
@pingouRed ~]$ strings /usr/bin/rkward.bin | grep "lastIndexOf"
_ZNK7QString11lastIndexOfE5QChariN2Qt15CaseSensitivityE
_ZNK7QString11lastIndexOfERKS_iN2Qt15CaseSensitivityE
_ZNK7QString11lastIndexOfER7QRegExpi
- From the computer on which rkward crashes
@pingouLab ~]$ strings /usr/bin/rkward.bin | grep "lastIndexOf"
_ZNK7QString11lastIndexOfE5QChariN2Qt15CaseSensitivityE
_ZNK7QString11lastIndexOfERKS_iN2Qt15CaseSensitivityE
_ZNK7QString11lastIndexOfERK7QRegExpi
- From the computer on which rkward does *not* crash

  
2. If you manage to have one version of rkward with that crash and one 
without, running

ldd /path/to/rkward.bin
on both binaries could possibly show a relevant difference.



Where it crashes:
http://fpaste.org/paste/9599
Where is does not crash:
http://fpaste.org/paste/9600

  
3. Assuming something is going wrong inside rkward code, perhaps trashing some 
memory locations in a strange way, it would be helpful to have the precise 
context. Try running

rkward --debug-level 5
produce the crash and post the last ~20 lines just before the "undefined 
symbol" message. Please do this several times to make sure the context stays 
the same. If it does not, post several versions.


First trial:
http://fpaste.org/paste/9596
Second:
http://fpaste.org/paste/9597
Third:
http://fpaste.org/paste/9598

I am wondering if I don't miss the requirement on qt-devel when I build
the package, I will do some test in this direction.

Thanks for your help,
Best regards,
Pierre



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[rkward-devel] rkward will not open RData files with non-ascii characters in file path via command line or xdg

2011-12-03 Thread stfs

Dear dev list
I have tried to find a way to report a bug - I apologize if this is the 
wrong way.


My system is Ubuntu lucid 10.04
rkward is the latest stable via ppa


Bug: rkward fails to open RData files via commandline which contain 
Danish characters in their file paths. The error shows the path with the 
offending characters shown as the utf8 "unknown char" character.


The same RData file can be opened from the rkward menu "open workspace" 
without problems.


I have set up my system to automatically open RData files in rkward so 
this issue is also present when I doubleclick an RData file.


To reproduce:
!) create or copy a RData file somewhere
2) change its name so it contains a Danish letter eg. ø
3) on the commandline:

rkward ø.RData


expected result: rkward opens with ø.RData as its workspace.

actual result: rkward opens and then produces an error which says

There has been an error opening file '/home/finn/?.Rdata':



best regards
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Re: [rkward-devel] rkward will not open RData files with non-ascii characters in file path via command line or xdg

2011-12-03 Thread stfs

Hi
The issue is gone ;)
thanks a lot.


On 2011-12-03 16:02, Thomas Friedrichsmeier wrote:

Hi,

On Saturday 03 December 2011, stfs wrote:

I have tried to find a way to report a bug - I apologize if this is the
wrong way.

our official bug tracker is here:
http://sourceforge.net/tracker/?atid=459007&group_id=50231&func=browse

But in general it's ok to report bugs to this mailing list, too. I have found
and fixed the issue in the development version. Thanks for reporting.


My system is Ubuntu lucid 10.04
rkward is the latest stable via ppa

You may want to consider using one of our daily build PPAs to test the fix:
https://launchpad.net/~rkward-devel
(Since these are daily builds, it may take up to one day for the fix to become
available).

Regards
Thomas


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Re: [rkward-devel] quantal

2012-10-30 Thread stfs
Hi developers
Let me start by saying how amazed I am with your work, I never cease to 
be impressed with rkward :)

Now to my issues

I'm on xubuntu 12.04
R from CRAN, 2.15.2 (all issues were the same with 2.15.1)

I have two different issues with two different versions of rkward:

Issue 1: rkward in the repository:
Recently rkward from the repositories started to give an error on startup
"The rkward R-library could not be loaded at all, or not in the correct 
version.". If I continue it will soon crash.

It started about 3-4 weeks ago. I was extremely busy at the time and 
just hurried and installed the svn version (currently ver. 4398) after 
removing the one from repository (synaptic "complete remove").

Issue 2: compiled rkward trunk:
the "configure shortcuts" menu is missing.

I just reinstalled the repository version, it still crashes like before

Best

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Re: [rkward-devel] quantal

2012-10-30 Thread stfs


On 10/30/2012 07:51 PM, Thomas Friedrichsmeier wrote:

Hi,

On Tuesday 30 October 2012, stfs wrote:

I have two different issues with two different versions of rkward:

Issue 1: rkward in the repository:
Recently rkward from the repositories started to give an error on startup
"The rkward R-library could not be loaded at all, or not in the correct
version.". If I continue it will soon crash.

basic rule of thumb (sometimes you can get away without this, but often you
can't): If you're using an R version from CRAN, you can't use RKWard from the
normal repository. We have that covered on Ubuntu, though. See
https://launchpad.net/~rkward-devel . You should pick a variant marked "CRAN
version of R".


Wasn't really aware of this. Thanks.


It started about 3-4 weeks ago. I was extremely busy at the time and
just hurried and installed the svn version (currently ver. 4398) after
removing the one from repository (synaptic "complete remove").

Issue 2: compiled rkward trunk:
the "configure shortcuts" menu is missing.

Likely an installation problem of sorts. Generally, the least error-prone
solution seems to be to use
   cmake .. -DCMAKE_INSTALL_PREFIX=`kde4-config --prefix`
which will install to /usr, rather than /usr/local.


Solved it! And God does it start fast now.
It's great to see how rkward moves forward.

Regards
Thomas


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Re: [rkward-devel] quantal

2012-10-30 Thread stfs


On 10/30/2012 08:24 PM, stfs wrote:


On 10/30/2012 07:51 PM, Thomas Friedrichsmeier wrote:

Hi,

On Tuesday 30 October 2012, stfs wrote:

I have two different issues with two different versions of rkward:

Issue 1: rkward in the repository:
Recently rkward from the repositories started to give an error on startup
"The rkward R-library could not be loaded at all, or not in the correct
version.". If I continue it will soon crash.

basic rule of thumb (sometimes you can get away without this, but often you
can't): If you're using an R version from CRAN, you can't use RKWard from the
normal repository. We have that covered on Ubuntu, though. See
https://launchpad.net/~rkward-devel  . You should pick a variant marked "CRAN
version of R".


Wasn't really aware of this. Thanks.


It started about 3-4 weeks ago. I was extremely busy at the time and
just hurried and installed the svn version (currently ver. 4398) after
removing the one from repository (synaptic "complete remove").

Issue 2: compiled rkward trunk:
the "configure shortcuts" menu is missing.

Likely an installation problem of sorts. Generally, the least error-prone
solution seems to be to use
   cmake .. -DCMAKE_INSTALL_PREFIX=`kde4-config --prefix`
which will install to /usr, rather than /usr/local.


Solved it! And God does it start fast now.
It's great to see how rkward moves forward.
Unfortunately it turned out I accidentally installed from old sources. 
Once I updated the "configure shortcuts" was gone again, and further it 
started crashing as well.
I then, by hand, deleted anything rkward related on my whole system, 
installed from the new sources again (with the options above).

This time no chrashes but still no shortcuts menu.
I then added the the stable ppa "cran-version" and installed rkward v6 
over the compiled one. No shortcuts menu but crashes.
Deleted everything again, installed v6 from PPA, no shortcuts menu but 
no chrashes.
Uninstalled, removed PPA, deleted, installed v5.7. Now: shortcuts menu 
and no crashes.


So the crashes seem to be due to corruption/incompatibilites in the 
config files _somewhere_.
The menu issue could be due some change in sources in kde, perhaps. Or 
maybe I'm missing some library or ... well I don't know.

Anyway, now I have a working system again.


Regards
Thomas


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