Re: [arts-users] Cannot create abs_lookup with arts 2.5

2022-02-14 Thread Richard Larsson
Dear all, The deprecation warning is there because we will remove abs_xsec_per_speciesAddLines before Arts 3.0 is released. It is just warning you that some code will have to change in the future. Ignore it for the purpose of what you want to do here. About the speed. The new code should be co

Re: [arts-users] Cannot create abs_lookup with arts 2.5

2022-02-14 Thread Pengwang Zhai
Hello, Mattia, Thanks for the update. I have to admit that I did not use the line.xml file. I used the H2O file downloaded from HITRAN 2020. Originally I said “it seems working”, today I still cannot definitely confirm whether it works from my side, as ARTS 2.5 did not finish the calculation af

Re: [arts-users] Cannot create abs_lookup with arts 2.5

2022-02-14 Thread Lemke, Oliver
Hi Mattia, For ARTS 2.5, the line catalog has been updated and moved from arts-xml-data into its own package arts-cat-data. It's best to use this updated version with the development version of ARTS. You can obtain it from SVN: svn co https://arts.mi.uni-hamburg.de/svn/rt/arts-cat-data/trunk/

Re: [arts-users] Cannot create abs_lookup with arts 2.5

2022-02-11 Thread Pengwang Zhai
Thanks, Oliver and Mattia, for you help. After studying Mattia and Richard's posts, I figured out the following: Comment out line 15 of TestAbs.arts: #Copy(abs_xsec_agenda, abs_xsec_agenda__noCIA) And insert the following to line 16: AgendaSet( abs_xsec_agenda ){ abs_xsec_per_speciesInit

Re: [arts-users] Cannot create abs_lookup with arts 2.5

2022-02-10 Thread Lemke, Oliver
Hi Mattia, hi Pengwang, Thanks Mattia for helping out. :-) Since you were referring to Richard's earlier post, I'll take this opportunity to point out the searchable archive of this list, which might come in handy at times: https://www.mail-archive.com/arts_users.mi@lists.uni-hamburg.de/ Here

Re: [arts-users] Cannot create abs_lookup with arts 2.5

2022-02-10 Thread mattia . sabatini
Pengwang, sorry for my partial answer. Recently I compiled ARTS 2.5 and I had a similar issue concerning the absorption lookup table. Richard Larsson, helped me replying to my mail sent in this mailing list, suggesting to add abs_xsec_per_speciesAddLines into my cross-section agenda. He a

Re: [arts-users] Cannot create abs_lookup with arts 2.5

2022-02-10 Thread Pengwang Zhai
Thanks, Mattia. Would you advise how TestAbs.arts can be revised to include line-by-line calculation? Note that the behavior of TestAbs.arts is different in arts2.3, which does calculate line-by-line absorption coefficients. I do not want continua, as I am mainly interested in the visible spect

Re: [arts-users] Cannot create abs_lookup with arts 2.5

2022-02-10 Thread mattia . sabatini
Hi Pengwang, the controlfile TestAbs.arts, in line 15, has the following: Copy(abs_xsec_agenda, abs_xsec_agenda__noCIA) I checked in controlfiles/general/agendas.arts for what abs_xsec_agenda__noCIA does: AgendaCreate( abs_xsec_agenda__noCIA ) AgendaSet( abs_xsec_agenda__noCIA ){ abs_xsec_p

[arts-users] Cannot create abs_lookup with arts 2.5

2022-02-10 Thread Pengwang Zhai
Hello, ARTS community, I downloaded and compiled the latest version of arts. Now I tested the the creation of abs_lookup with the example control file located in: arts/controlfiles/artscomponents/absorption/TestAbs.arts I only modified two occurrences of: abs_speciesSet( species=[ "H2O-PWR98"