Re: [Bioc-devel] Build error due to TensorFlow installation

2019-09-03 Thread Shepherd, Lori
Perhaps others will have more to say or disagree but... In general we never recommended automatically installing anything on a users system without them knowing (ie. You shouldn't be installing modules and packages in the onLoad and this should be removed) It should be included in the README

Re: [Bioc-devel] Build error due to TensorFlow installation

2019-09-03 Thread Simon Dirmeier
Hi Lori, thanks for the reply. > In general we never recommended automatically installing anything on a > users system without them knowing (ie.� You shouldn't be installing > modules and packages in the onLoad and this should be removed) It > should be included in the README and as an�INSTALL

Re: [Bioc-devel] EXTERNAL: MultiAssayExperiment silently converting RangedSummarizedExperiments into SummarizedExperiments.

2019-09-03 Thread Marcel Ramos
Hi Charles, Thank you for your post and for providing a reproducible example. I was able to reduce the example to behavior from the coerce method on `list`/`ANY` objects to `SimpleList`. Here is the reduced example: ``` r suppressPackageStartupMessages({     library(SummarizedExperiment) })