Hi Lori,
thanks for the reply. > In general we never recommended automatically installing anything on a > users system without them knowing (ie.� You shouldn't be installing > modules and packages in the onLoad and this should be removed) It > should be included in the README and as an�INSTALL file included > in�the package top level directory. > I see, thanks! I agree it's kinda dodgy but I didn't know a better way to pass the BioC checks. I changed it accordingly. > Any needed module or system dependency should be assumed to be > installed correctly on a users system�and if you need the builders to > have something installed a request made via this mailing list (Please > let us know if you think something is missing and needs to be > installed on the daily builders�- we would generally then look for the > INSTALL file on the git repository for installation instructions if it > was justifiable) > Do you think it would be possible to install TensorFlow and TensorFlow-Probability on the builders? I'd assume that many would profit from that. Best regards, Simon > Right now tensorflow is unavailable on our windows server (tokay1)�as > we have not updated to python 3 (but will be in the near future)� The > windows error can be ignored for now. > > > > Lori Shepherd > > Bioconductor Core Team > > Roswell Park Cancer Institute > > Department of Biostatistics & Bioinformatics > > Elm & Carlton Streets > > Buffalo, New York 14263 > > ------------------------------------------------------------------------ > *From:* Bioc-devel <bioc-devel-boun...@r-project.org> on behalf of > Simon Dirmeier <simon.dirme...@web.de> > *Sent:* Monday, September 2, 2019 6:08:45 AM > *To:* bioc-devel@r-project.org <bioc-devel@r-project.org> > *Subject:* [Bioc-devel] Build error due to TensorFlow installation > Dear all, > > since I replaced some old C++ code with TensorFlow I am getting some > build errors on merida1 and tokay1 regarding installation (even though I > install TF and TF Probability during /.onLoad/) > > http://bioconductor.org/checkResults/devel/bioc-LATEST/netReg/merida1-buildsrc.html > > Does anyone know how I can fix this or did anyone use TF with > Bioconductor so far? > > Many thanks in advance. > > Best, > > Simon > > > > > > ������� [[alternative HTML version deleted]] > > _______________________________________________ > Bioc-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/bioc-devel > > This email message may contain legally privileged and/or confidential > information. If you are not the intended recipient(s), or the employee > or agent responsible for the delivery of this message to the intended > recipient(s), you are hereby notified that any disclosure, copying, > distribution, or use of this email message is prohibited. If you have > received this message in error, please notify the sender immediately > by e-mail and delete this email message from your computer. Thank you. [[alternative HTML version deleted]]
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