Re: [caret-users] Segmentation of partial hemisphere - addendum

2006-01-11 Thread Roland Marcus Rutschmann
Hi again, On Monday 09 January 2006 16:52, Donna Hanlon wrote: My Linux Caret just segmented your occipital lobe in no time flat, no problems.  Did you toggle on disconnect eye (even though there isn't one), hindbrain, etc.? ok I tested the new and the official version now. Both work if I

Re: [caret-users] Segmentation of partial hemisphere - addendum

2006-01-09 Thread Donna Hanlon
Hi Roland, I got your log file. Could you upload your structural volume here: http://pulvinar.wustl.edu/cgi-bin/upload.cgi If AFNI, I need both .HEAD and .BRIK; for Analyze, both .hdr and .img. Also, let me know which peaks you used. The crash is occurring pretty early in segmentation --

Re: [caret-users] Segmentation of partial hemisphere - addendum

2006-01-09 Thread Donna Hanlon
Hi Roland, Yeah, 2Gb memory should cover it. ;-) My Linux Caret just segmented your occipital lobe in no time flat, no problems. Did you toggle on disconnect eye (even though there isn't one), hindbrain, etc.? I left on everything up and including segmentation. We had some problems with

Re: [caret-users] Segmentation of partial hemisphere - addendum

2006-01-07 Thread Roland Marcus Rutschmann
Hi again, On Saturday 07 January 2006 00:50, David Van Essen wrote: Roland, If your partial hemisphere does not include the anterior commissure,   it will probably be important to DE-select the Disconnect Hindbrain,   Disconnect Eye and Skull, Cut Corpus Callosum, and Fill Ventricles  

Re: [caret-users] Segmentation of partial hemisphere - addendum

2006-01-06 Thread David Van Essen
Roland, If your partial hemisphere does not include the anterior commissure, it will probably be important to DE-select the Disconnect Hindbrain, Disconnect Eye and Skull, Cut Corpus Callosum, and Fill Ventricles options, as these rely on stereotaxic coordinates relative to the AC. We