Hi Roland,
Yeah, 2Gb memory should cover it. ;-)
My Linux Caret just segmented your occipital lobe in no time flat, no
problems. Did you toggle on disconnect eye (even though there isn't
one), hindbrain, etc.? I left on everything up and including
segmentation. We had some problems with toggling off stuff at first,
but think we fixed them. The "official" download site doesn't include
those fixes, though, so it's worth trying an upgrade here:
http://brainvis.wustl.edu/pub/john/
login pub
password download
Try just the caret5 executable:
http://brainvis.wustl.edu/pub/john/caret5_exe_linux.zip
Don't think the whole distribution will be needed in your case.
Let us know if this helps, hurts, etc.
Donna
On 01/09/2006 09:36 AM, Roland Marcus Rutschmann wrote:
On Monday 09 January 2006 15:24, Donna Hanlon wrote:
Hi Roland,
Hi again,
I got your log file. Could you upload your structural volume here:
I first did it with my own data, which I am uploading at the moment.
But the log I sent was done with your tutorial brain, which I handled exactly
as you in the tutorial but witch the adjustment for occipital flattening:
unfortunately doing this gives me a segfault. Going through the
flattening
tutorial but choosing a lower ymax e.g. 80 for occipital flattening
and
adjusting cropping z to 46..153 I get a segmentation fault.
I don't remember the peaks exactly any more but think I took those of the
tutorial.
I have a debian stable system here (with some upgrades), running X.org 6.8.2
with the nvidia drivers (1.0.7667) for glx. (I'll try with MESA tomorrow).
I think 2GB of Mem+2GB swap should be enough. Running a whole hemisphere works
like a charm.
Thanks and a late Happy New Year,
Roland
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