Re: [caret-users] orientation

2012-12-06 Thread Matthew Ward
I would be interested in an answer to this as well. Thanks! On Thu, Dec 6, 2012 at 4:38 AM, Colin Reveley cm...@sussex.ac.uk wrote: I'm writing something up. It turns out that what appears in my MRI as the right hem is actually the left. It turns out that matters. I have to flip it. Is

Re: [caret-users] orientation

2012-12-06 Thread Rouhollah Abdollahi
there are two commands in freesurfer for surface rotation and surface registration to volume. mris_register_to_volume mris_rotate best Rouhi On Thu, Dec 6, 2012 at 4:32 PM, Donna Dierker do...@brainvis.wustl.eduwrote: To my knowledge, there is no flipLR.sh script that x-flips the volumes and

Re: [caret-users] orientation

2012-12-06 Thread Colin Reveley
thanks Rouhollah but those don't quite cover it. and anyway, I'd prefer to keep freesurfer out of it. I think restricting to metric etc and generally the strategy I outlined in my follow up is probably decent. a simple approach that captures most stuff in a simple way, and just ignores scenes,

Re: [caret-users] orientation

2012-12-06 Thread Frederic Roux
-users@brainvis.wustl.edu Sent: Thursday, December 6, 2012 7:23:17 PM Subject: Re: [caret-users] orientation thanks Rouhollah but those don't quite cover it. and anyway, I'd prefer to keep freesurfer out of it. I think restricting to metric etc and generally the strategy I outlined in my follow