thanks Rouhollah but those don't quite cover it. and anyway, I'd prefer to keep freesurfer out of it.
I think restricting to metric etc and generally the strategy I outlined in my follow up is probably decent. a simple approach that captures most stuff in a simple way, and just ignores scenes, vectors or whatever. make them again. paint borderproj surfaces that are fiducials or inflated metric volumes one transform for surfaces. no transform for volumes (reorder the voxels instead, which neatly solves header issues and issues of multiple resolutions in one project. actually mri_convert might be nicer than fsl for doing that). no transform needed for those data files. I think. looking at them. also if you drop the borders (or convert them) all those things are expressable as gifti or nifti. like much else. which means you can move completely into matlab should you wish. or workbench. Gifti/nifti matlab is really good. not a replacement. but certainly an adjunct. On 6 December 2012 13:00, <[email protected]> wrote: > Rouhollah Abdollahi
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