There is an open postdoctoral position for a membrane protein
structure-function project in my lab at the NIH. We are currently focusing
on integral membrane enzymes (Science. 2018, doi: 10.1126/science.aao6326)
and transporters of transition metal ions (J Biol Chem. 2018, doi:
Thanks, Robbie, I will try this.
-Vandna
On Mon, Feb 12, 2018 at 3:00 PM, Robbie Joosten
wrote:
> Dear Vandna,
>
>
>
> Paired refinement is indeed the most reliable way to see whether the
> higher resolution data help your refinement. It is done automatically on
>
Dear Vandna,
Paired refinement is indeed the most reliable way to see whether the higher
resolution data help your refinement. It is done automatically on the
pdb-redo.eu server if the resolution of the data used in refinement so far is
lower than the resolution of your dataset (by at least
The most useful information for this can come from paired refinement, which
will tell you if the data in outer shell is improving the model.
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3689524/
For example
On balance it’s unlikely throwing away measurements will make your model
better...
Hi,
I solved a crystal structure at 1.69 A resolution with R /R free 18
/ 20 i used 1.69 A data.
Data completeness is 100 % and for the outer shell, it's 50 %. for i /Sig I
> 1.
Do I need to cut resolution in refinement??
Vandna Kukshal
Postdoctral Research Associate
Dept. Biochemistry
Dear Rens de Vries,
Sorry for the trouble. Can you please try the following?
1. Open the file C:\CCP4-7\7.0\InstallSetup.cmd in a text editor
2. Change the string "--skip-phenix-dispatchers" to
"--skip_phenix_dispatchers" (i.e. last two dashes to underscores)
3. Save the file
4.
Rutgers Biomedical and Health Sciences
Faculty Position in Structural Biology and Disease
The Department of Microbiology, Biochemistry, and Molecular Genetics and the
interdepartmental Center for Immunity and Inflammation at Rutgers New Jersey
Medical School seeks an exceptional Structural
Dear all,
We are looking for a highly-motivated and creative Post Doctoral Researcher
with a structural biology/bioinformatics background and experience in software
development to work in Birkbeck College, London, on an exciting computational
project in the field of cryoEM. The position is a
Dear all,
Although I normally use Linux for all my work with CCP4i2, I now use the
Windows because of a workshop I will be giving. Here the audience is using
Windows almost exclusively, therefore I chose to adapt to it.
After using the xia2/DIALS pipeline I wanted to use the