Re: [ccp4bb] gelification of a pure protein

2013-04-23 Thread Antony Oliver
To ask a potentially daft question - but why do you need to reduce the salt? You say you are able to purify it, and that it behaves on gel filtration - but only starts misbehaving when you dialyse, and the NaCl is below 100 mM. We've crystallised many proteins, particularly DNA-binding

Re: [ccp4bb] gelification of a pure protein

2013-04-23 Thread Cécile Breyton
Dear Pascal, We have the case of a protein that gelifies without precipitating when bearking overexpressing E. coli cells. We had a look at the sample in electron microscopy and the protein polymerises and forms irreversible and very pretty fibers (explaining the gel). Maybe you want to have

Re: [ccp4bb] gelification of a pure protein

2013-04-23 Thread Ho Leung Ng
Hi Pascal, Is this a membrane protein? I worked on a GPCR that gelled upon high concentration in a detergent/cholesterol solution. It was reversible upon dilution and ran as a monomer by size exclusion chromatography. Detergent assays showed that detergent was not being concentrated in the

[ccp4bb] gelification of a pure protein

2013-04-22 Thread Pascal Egea
Dear All, I am presently faced with a peculiar case in the lab. We are expressing a protein in E. coli and we are able to express it as a fusion protein without problems . Fusion cleavage goes well and the final product looks homogenous by size-exclusion chromatography with the expected molecular

Re: [ccp4bb] gelification of a pure protein

2013-04-22 Thread Mark van Raaij
reminds me of structure 1NEU, although here the gelation was reversible, see ref and abstract below - the paper has a photo of a tube of soluble protein and gelled protein we have also had a couple of cold-sensitive proteins in our hands, that precipitated at 4 degrees when concentrated, but

Re: [ccp4bb] gelification of a pure protein

2013-04-22 Thread Michael Thompson
- Original Message - From: Pascal Egea pas...@msg.ucsf.edu To: CCP4BB@JISCMAIL.AC.UK Sent: Monday, April 22, 2013 3:36:24 PM GMT -08:00 US/Canada Pacific Subject: [ccp4bb] gelification of a pure protein Dear All, I am presently faced with a peculiar case in the lab. We

Re: [ccp4bb] gelification of a pure protein [SEC=UNCLASSIFIED]

2013-04-22 Thread DUFF, Anthony
Anthony Duff    Telephone: 02 9717 3493  Mob: 0431891076 -Original Message- From: CCP4 bulletin board [mailto:CCP4BB@JISCMAIL.AC.UK] On Behalf Of Michael Thompson Sent: Tuesday, 23 April 2013 9:44 AM To: CCP4BB@JISCMAIL.AC.UK Subject: Re: [ccp4bb] gelification of a pure protein Does

Re: [ccp4bb] gelification of a pure protein

2013-04-22 Thread Pascal Egea
Thanks to All for the diligent answers to my query, The protein is not thermophilic and has only one cysteine. We are working in presence of freshly added reducing agent and glycerol to promote solubility (well kinda it seems). This is not an RNA or DNA binding protein and it has no

Re: [ccp4bb] gelification of a pure protein

2013-04-22 Thread Shane Caldwell
Hi Pascal, Your problem brings to mind this paper: FG-Rich Repeats of Nuclear Pore Proteins Form a Three-Dimensional Meshwork with Hydrogel-Like Properties Science 3 November 2006: 314 (5800), 815-817.[DOI: 10.1126/science.1132516] Of course, in that case, the gellation was deliberate, but