Dear Rain Field,
The current release is indeed unable to work with the newest versions
of XDS and a new version should be available before the end of the
week, which will be advertised on the blog. However this requires
either a new nightly build of phenix or an unreleased cctbx build, as
bits of
Dear all,
sorry for the only half-related reply, but ...
On Wed, Jul 03, 2013 at 09:20:56AM +0100, Rain Field wrote:
Is there any similar software available?
... since you asked for similar software: the autoPROC release from
19th June is compatible. See
Hi Appu,
Adding the extinction coefficients of the nucleotides is a reasonable
approximation; a somewhat more rigorous approximation takes into account
nearest neighbor frequencies; see, for example, some commercial web sites such
as
Authors can supply the secondary structure assignments to the PDB and these
trump the PDBs own determinations and will appear in the authors' entry.
Remarks 650 (Helix) and 700 (Sheet) are then included which allow the
documentation of the origins of the secondary structure definitions and any
Call for access to Synchrotron Beamline Facilities, autumn 2013 - EMBL,
Hamburg, Germany
As you may already be aware, due to unforeseen circumstances related to
the civil construction of the PETRA III extension, DESY has postponed
the PETRA III shutdown and user operation will continue until
Hi All,
Thanks for all your responses and help.
I'll be trying all of these things over the coming couple of weeks.
Rhys
From: pshawstew...@gmail.com [pshawstew...@gmail.com] On Behalf Of Patrick Shaw
Stewart [patr...@douglas.co.uk]
Sent: 04 July 2013
Dear all,
I recently collected some 10 degree wedges of data on a very small
membrane protein. The data processing so far is not working well. XDS
is the only software that process my data and give a space group and
cell parameters. However, I ended up with a merged dataset with low
http://io9.com/rare-3d-camera-found-containing-photos-from-wwi-669397198
Rare 3D Camera Found Containing Photos from WWI
http://io9.com/rare-3d-camera-found-containing-photos-from-wwi-669397198
--
===
All Things Serve the
Hi Fei,
I assume you have edited the XDS.INP file to include the initially found space
group and the first refined cell ?
If not, then that would be my first choice to do. If that then still fails with
the default parameters, then I would start fixing some values instead of
refining all of
Dear Fei,
in addition, take a look here:
https://www.researchgate.net/profile/Fulvio_Saccoccia/contributions/?ev=prf_act
and download my tutorial on XDS if you want.
Bye
Il 04/07/2013 18:26, Fei Li ha scritto:
Dear all,
I recently collected some 10 degree wedges of data on a very
XDSme works fine right now.
Thank you all!
Hello Appu,
Small amounts of strongly UV absorbing contaminants can throw off
your measurements. If you want to be very accurate, try a fluorescent
dye specific for double stranded DNA such as PicoGreen.
Ho
Ho Leung Ng
University of Hawaii at Manoa
Assistant Professor, Department of
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