Hi folks
When I run hkl2map for SAD data using unmerged .sca files produced by Aimless,
I am invariably bugged by the fact that merged .sca files (from Aimless) have
the unit cell in the first few lines, but the unmerged files don't - so I have
to either type in the cell dimensions or
Dear All,
Whenever I open up imosflm GUI from the terminal, I get the
following error:
iMosflm version 7.1.1, 24th March 2014
ipmosflm is not compatible.
Please configure iMosflm with the correct executable.
clicking the Configure button at the bottom of the error message panel
Hi
When you get this error, and everything has been closed, what do you get if
you type (in the same terminal window that you tried to start iMosflm) -
$MOSFLM_EXEC
?
It's plain from the message that
ipmosflm is not compatible'
that iMosflm is trying to run with an
Dear Sir,
If I sorce ccp4-6.3, and then change in the bashrc file source
ccp4-6.4, (and source the modified .bashrc file in either case) but don't close
the previous terminal, then opening imosflm gives the aforementioned error.
After closing the imosflm GUI, if I type at the
Hi Sreetama
That's the problem - sourcing the old ccp4 6.3 distro has set up MOSFLM_EXEC to
point to an old copy of ipmosflm that will not run with the latest iMosflm.
Mosflm version 7.0.9 for Image plate and CCD data 14th May 2012
which cannot be used with iMosflm 7.1.0.
So it looks
Harry,
I've run into this problem before with other programs when I switch between
v6.3 v6.4. I think the problem is this code in ccp4.setup-sh:
if [ `expr :${PATH}: : .*:${dir}:` -eq 0 ]; then
if test $ccp4_first_in_path -eq 1; then
PATH=${dir}:${PATH}
else
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program https://sbgrid.org/news/sbgridne-cat-computing-school.
*Quo Vadis
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Dear Sreetama, dear Ian,
I avoid sourcing both version 6.3 and 6.4 in the same terminal. If I
need to work with 6.3 I modify my .bashrc from 6.4 to 6.3 and then
open a new terminal to make sure everything refers to v6.3 and vice versa.
Best,
Tim
Dear all,
For experiments that involve switching between different versions of CCP4
you might like to try the CCP4Dispatchers scripts (see
http://www.ccp4.ac.uk/html/CCP4Dispatchers.html). On a binary install of
ccp4 6.4.0 these will have been generated automatically. For example, on my
Linux
Jason -
I’d also like to express my appreciation for all you’ve done to benefit the
PyMOL community. You have, time and again, proven yourself to be an extremely
responsive and helpful leader both in developing the software and in enabling
others to learn to use it. Like many on these lists,
Dear Crystallographers (this may be off-topic, depending on whom you ask...)
A: Can anyone recommend new improved alternatives to the usual suspects for
proteases (TEV, thrombin, enterokinase, etc.)? I've seen some literature about
SUMO- and NEDD8-dependent enzymes, but those apparently require
Dear Jacob,
We have been using factor XA for several years for tag removal of the
proteins we express in the facility. Factor XA does not leave an overhang,
cutting after an IEGR sequence. It can be quite expensive though so we are
looking into methods to purify it from bovine plasma.
David
Dear All,
I am very new to the field of crystallography, I have a few questions which
are very basic and getting input from this forum would help me a lot.
Firstly I am trying to solve a structure using MR Molrep. In the result
the Rfactors are really high how do I reduce the same?? ..When I
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