Polygon in the validation tools of phenix.
On Saturday, October 15, 2016, amit sharma <
0d1d6aa5c57b-dmarc-requ...@jiscmail.ac.uk> wrote:
> Hi,
>
> What is the average Wilson B-factor for all single crystal protein
> structures deposited in PDB at 3.5Å? Is there any software or a
Quoting Dale from an older post
"It's also true that the Wilson B calculation assumes that all the B
factors in the crystal are the same - which is also far from the true in
most macromolecular crystals. A person who holds to the practice of
aggressively building water molecules and loops will
>
> wrote:
>
>>I'm sorry but I don't understand what your problem is. Do you think
>> the B factors are too small for a 3A data set? A range of 70 to 75 is a
>> little smaller than usual but probably not out of bounds.
>>
>> Dale Tronrud
>>
>>
Hi all,
I have a structure at 3.0 A and R/Rfree of 24/28. The mean B value is
around 98. The B value is especially high at the N terminus and two loop
regions (around 120-150 AA).
The rest of the structure averaged around 70-75. Has anyone faced such a
scenario? How reliable is the structure and
