Re: [ccp4bb] the purification process of protein, used for crystallization

2017-11-19 Thread Nicholas Last
It depends on the accessibility of the cut site when bound to the column, but we have a lot of luck with doing an on-column TEV cut of his-tagged proteins. We load the protein on a cobalt column, mix in his-tagged TEV, and cut overnight. In the morning the cut protein just flows off, the tag a

Re: [ccp4bb] the purification process of protein, used for crystallization

2017-11-18 Thread Nishant Varshney
In continuation of this thread, what is the success rate of separating TEV and MBP tag from my desired protein after TEV cleavage using Hydrophobic/Ion exchange column? I have also read TEV is less active in a high concentration of Imidazole, so dialysis before adding TEV may work better but then r

Re: [ccp4bb] the purification process of protein, used for crystallization

2017-11-17 Thread Anshumali Mittal
Hi Liuqing, The scheme you suggested (or heard) of using Ion-exchange at the end can be useful to separate protein with same net charge but different conformations. Ciao On Fri, Nov 17, 2017 at 1:49 PM, Gianluca Cioci wrote: > Dear All > > The ion exchange has the great advantage ,over other t

Re: [ccp4bb] the purification process of protein, used for crystallization

2017-11-17 Thread Gianluca Cioci
Dear All The ion exchange has the great advantage ,over other tecniques, to concentrate the protein. Histrap+sec is a big classic in protein purification but times it is worth considering other schemes. Why doing a SEC? It is for removing aggregates or a contaminant ? It the latter case probably

Re: [ccp4bb] the purification process of protein, used for crystallization

2017-11-17 Thread David Blum
Hi Liuqing, I would not recommend SEC. SEC does not give that great of a separation unless your contaminant is greatly different in size. Instead of SEC, you might want to consider hydrophobic interactions chromatography (HIC). You can add your ammonium sulfate directly to your eluted protein f

Re: [ccp4bb] the purification process of protein, used for crystallization

2017-11-17 Thread Marco Mazzorana
Hi Liuqing, I agree with what Pascal has already written and can add something from my experience. In one case I needed to purify a protein using gelfiltration to control the exact composition of the buffer before preparing for the ion exchange. The protein was only stable in high salt buffers. D

Re: [ccp4bb] the purification process of protein, used for crystallization

2017-11-17 Thread Pascal Egea
Hi liuqing, It is more usual to finish with a sec because you control the composition of the final conditioning buffer of your sample and remove any aggregates. We personally favor the following sequence iMac - desalt - iex if necessary - sec Desalt meaning one of those small Pd10 like column th

[ccp4bb] the purification process of protein, used for crystallization

2017-11-17 Thread Liuqing Chen
Hello everyone! I have listened someone suggested that, first use affinity chromatography (Ni-NTA), then use SEC (superdex200 increase), and finally used ion exchange (monoQ), to purified protein, which will be used to crystallization. My question is why the monoQ used in the finally step