Bug#981680: closed by Debian FTP Masters (reply to Mathias Gibbens ) (Bug#981680: fixed in golang-github-canonical-go-dqlite 1.10.1-1)

2022-04-18 Thread Nilesh Patra
Control: severtiy -1 important On Fri, 26 Nov 2021 14:43:09 +0200 Adrian Bunk wrote: > Control: reopen -1 > > On Fri, Nov 26, 2021 at 12:21:09PM +, Debian Bug Tracking System wrote: > >... > > golang-github-canonical-go-dqlite (1.10.1-1) unstable; urgency=medium > >... > >* Add patches

Bug#1009462: I think we can remove pyqi (Was: Bug#1009462: pyqi: FTBFS: Only Python 3.8 and 3.9 are supported.E: pybuild pybuild:369: configure: plugin distutils failed with: exit code=1: python3.10 s

2022-04-15 Thread Nilesh Patra
On Wed, Apr 13, 2022 at 09:49:35AM +0200, Andreas Tille wrote: > Hi, > > if I remember correctly pyqi was packaged for qiime 1.x. > It has no rdepends any more and I think we should remove it. I got a few spare minutes so I fixed the RC bug. > Does anybody think differently? It is always good t

Bug#1008421: golang-github-traefik-yaegi: FTBFS: dh_auto_test: error: cd _build && go test -vet=off -v -p 8 -timeout 1h github.com/traefik/yaegi github.com/traefik/yaegi/cmd/yaegi github.com/traefik/y

2022-04-14 Thread Nilesh Patra
Thanks Lucas, for reporting this bug! As it looks, yaegi currently does not support go-1.18 properly[1] - atleast support for generics is missing. I could maybe circumvent these tests somehow but that does not look the most optimal thing to do atleast for now. So I will get the ball rolling once

Bug#996965: Packaging bslib + licensing issues

2022-04-11 Thread Nilesh Patra
On 23 February 2022 6:39:57 pm IST, Andreas Tille wrote: >Am Wed, Feb 23, 2022 at 01:52:26PM +0530 schrieb Nilesh Patra: >> Even if we give out sources It looks * very * unlikely for someone to edit >> this in what is a part of >> an * R * package. > >I'd rep

Bug#996965: Packaging bslib + licensing issues

2022-04-11 Thread Nilesh Patra
On 2/23/22 12:51 PM, Andreas Tille wrote: Am Wed, Feb 23, 2022 at 12:24:41PM +0530 schrieb Nilesh Patra: When I looked at the source, it comes with a few minified javascript files, which have sources so I can manage this. What looked like a bit of a problem to me is that it vendors several

Bug#996965: Packaging bslib + licensing issues

2022-04-11 Thread Nilesh Patra
Hi all, [ CC'ed Andreas who last worked on this ] bslib is needed for the new rmarkdown update, and it is being used in other packages in the ecosystem as well, as it seems. When I looked at the source, it comes with a few minified javascript files, which have sources so I can manage this. Wh

Bug#1009159: kmerresistance: Add autopkgtest

2022-04-07 Thread Nilesh Patra
Package: kmerresistance Severity: wishlist Tags: newcomer Hi, Please add autopkgtests for kmerresistance. Regards, Nilesh -- System Information: Debian Release: bookworm/sid APT prefers testing APT policy: (500, 'testing') Architecture: amd64 (x86_64) Kernel: Linux 5.14.0-2-amd64 (SMP w/8

Bug#1009158: xdffileio: Add autopkgtest

2022-04-07 Thread Nilesh Patra
Source: xdffileio Severity: wishlist Tags: newcomer Dear Maintainer, Please add autopkgtests for this package. Regards, Nilesh -- System Information: Debian Release: bookworm/sid APT prefers testing APT policy: (500, 'testing') Architecture: amd64 (x86_64) Kernel: Linux 5.14.0-2-amd64 (SM

Bug#1009156: pplacer: Add autopkgtest

2022-04-07 Thread Nilesh Patra
Package: pplacer Version: 1.1~alpha19-6 Severity: wishlist Dear Maintainer, Please provide autopkgtests for pplacer. Regards, Nilesh -- System Information: Debian Release: bookworm/sid APT prefers unstable APT policy: (500, 'unstable'), (1, 'experimental') Architecture: amd64 (x86_64) Kern

Bug#1008459: qiskit-terra: FTBFS: dh_auto_test: error: pybuild --test -i python{version} -p "3.10 3.9" returned exit code 13

2022-03-29 Thread Nilesh Patra
control: reassign -1 src:nbconvert control: forcemerge -1 1008376 control: affects -1 src:qiskit-terra Hi, > ERRORS > > _ ERROR collecting > .pybuild/cpython3_3.9/build/test/python/tools/jupyter/test_notebooks.py _ > Impo

Bug#1007804: amfora: AppArmor policy

2022-03-29 Thread Nilesh Patra
Hi, On Thu, 17 Mar 2022 04:46:05 + Jo Coscia wrote: > I would like to contribute an AppArmor policy for amfora. I asked the > folks in #apparmor about this, and they recommended going to the Debian > bug tracker. > > I tested amfora with the following policy, and all features appear to > wor

Bug#1008608: r-cran-purrrogress: autopkgtest failure: Error in `is(pb, c("winProgressBar", "tkProgressBar", "txtProgressBar"))`: length(class2) == 1L is not TRUE

2022-03-29 Thread Nilesh Patra
Package: r-cran-purrrogress Version: 0.1.1-3 Severity: serious Dear Maintainer, r-cran-purrrogress is failing its autopkgtest, some of the output is pasted below. | ══ Failed tests | ── Error (apply.R:86:5): with_apply_progress ─

Bug#1008269: Go standard library TLS 1.3 implementation, modified for QUIC (Go-1.18)

2022-03-25 Thread Nilesh Patra
Package: wnpp Severity: wishlist Owner: Nilesh Patra * Package name: golang-github-marten-seemann-qtls-go1-18 Version : 0.1.1-1 Upstream Author : Marten Seemann * URL : https://github.com/marten-seemann/qtls-go1-18 * License : BSD-3-clause Programming Lang

Bug#946979: lists.debian.org: Have a mailing list archive for the JavaScript team.

2022-03-25 Thread Nilesh Patra
control: retitle -1 lists.debian.org: please create debian-js > Of course you do. We do not move lists from alioth per se. [ Long time since this bug is open, replying to this with needed info, on behalf of Utkarsh and JS team ] Name: debian-js Rationale: Debian has over a thousand Javascript

Bug#1008200: [Pkg-javascript-devel] Bug#1008200: marked as done (node-send: patched node-mime-types cause problems for other reverse-dependencies)

2022-03-25 Thread Nilesh Patra
On 3/25/22 8:15 PM, Debian Bug Tracking System wrote: node-send (0.18.0+~cs1.19.1-1) unstable; urgency=medium . * Embed typescript declarations * New upstream version 0.18.0+~cs1.19.1 * Add dependency to node-ms and node-statuses and drop old patches (Closes: #1008200) * Add patch

Bug#1008200: [Pkg-javascript-devel] Bug#1008200: node-send: patched node-mime-types cause problems for other reverse-dependencies

2022-03-25 Thread Nilesh Patra
Yadd, gentle ping on this? :) On 3/25/22 12:09 AM, Nilesh Patra wrote: On Thu, 24 Mar 2022 15:09:24 +0530 Nilesh Patra wrote: Package: node-send Version: 0.17.2-2 Severity: important X-Debbugs-Cc: mer...@debian.org Hi Yadd, node-send is patched[1] to use node-mime-types instead of node-mime

Bug#1007248: [Pkg-javascript-devel] Bug#1007248:

2022-03-25 Thread Nilesh Patra
On 25 March 2022 4:51:44 pm IST, hardpenguin13 wrote: >Was also affected by this, ended up removing affected nodejs packages and >installing them again. No attempt to overwrite reported by dpkg. Same, I saw this yesterday and the same workaround worked.

Bug#1008200: node-send: patched node-mime-types cause problems for other reverse-dependencies

2022-03-24 Thread Nilesh Patra
On Thu, 24 Mar 2022 15:09:24 +0530 Nilesh Patra wrote: > Package: node-send > Version: 0.17.2-2 > Severity: important > X-Debbugs-Cc: mer...@debian.org > > Hi Yadd, > > node-send is patched[1] to use node-mime-types instead of node-mime. > However, this change is b

Bug#1008200: node-send: patched node-mime-types cause problems for other reverse-dependencies

2022-03-24 Thread Nilesh Patra
Package: node-send Version: 0.17.2-2 Severity: important X-Debbugs-Cc: mer...@debian.org Hi Yadd, node-send is patched[1] to use node-mime-types instead of node-mime. However, this change is breaking node-shiny-server[2] build (not yet uploaded) with: | TypeError: send.mime.define is not a funct

Bug#994575: dipy: autopkgtest idea

2022-03-23 Thread Nilesh Patra
On Fri, 24 Dec 2021 19:15:51 +0530 Nilesh Patra wrote: > On checking, it stems from the fact that fury (python module) that dipy needs > is not in (test-)depends, and neither is it in the > archive. > Probably other tests also are missing some or the other module. I also see a

Bug#1008112: Source is duplicated with golang-mvdan-sh

2022-03-22 Thread Nilesh Patra
On Wed, Mar 23, 2022 at 04:04:41AM +0800, Shengjing Zhu wrote: > It's upstream that puts them in one repo. > And src:shfmt clearly contains all the source of src:golang-mvdan-sh > > > Also, if you look even "gosh" is a part of mvdan-sh and it is also in the > > archive as a separate package; > >

Bug#1008112: Source is duplicated with golang-mvdan-sh

2022-03-22 Thread Nilesh Patra
Hi Shengjing, On Wed, 23 Mar 2022 02:35:20 +0800 Shengjing Zhu wrote: > Control: found -1 shfmt/3.4.3-1 > Control: found -1 golang-mvdan-sh/3.4.3+ds-1 ^^ I have excluded the source for shfmt in that version[1] So I do not think duplicated source is true

Bug#1008103: ITP: golang-github-gatherstars-com-jwz -- Go implementation of the JWZ email threading algorithm

2022-03-22 Thread Nilesh Patra
Package: wnpp Severity: wishlist Owner: Nilesh Patra * Package name: golang-github-gatherstars-com-jwz Version : 1.3.0-1 Upstream Author : GatherStars * URL : https://github.com/gatherstars-com/jwz * License : Apache-2.0 Programming Lang: Go Description

Bug#1008101: ITP: golang-github-jhillyerd-enmime -- MIME mail encoding and decoding package for Go

2022-03-22 Thread Nilesh Patra
Package: wnpp Severity: wishlist Owner: Nilesh Patra * Package name: golang-github-jhillyerd-enmime Version : 0.9.3-1 Upstream Author : James Hillyerd * URL : https://github.com/jhillyerd/enmime * License : Expat Programming Lang: Go Description : MIME

Bug#1008099: ITP: golang-github-cention-sany-utf7 -- UTF7 UTF8 transcoder. With transformer interface.

2022-03-22 Thread Nilesh Patra
Package: wnpp Severity: wishlist Owner: Nilesh Patra * Package name: golang-github-cention-sany-utf7 Version : 0.0~git20170124.26cad61-1 Upstream Author : Sany * URL : https://github.com/cention-sany/utf7 * License : TODO Programming Lang: Go Description

Bug#1005479: toil: FTBFS: dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p "3.10 3.9" returned exit code 13

2022-03-19 Thread Nilesh Patra
On Sat, Mar 19, 2022 at 02:32:12PM +0100, Paul Gevers wrote: > > [1] https://people.debian.org/~eriberto/README.package-tests.html > > For avoidance of doubt, the canonical definition lives in the autopkgtest > package: > https://salsa.debian.org/ci-team/autopkgtest/-/blob/master/doc/README.packa

Bug#1005479: toil: FTBFS: dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p "3.10 3.9" returned exit code 13

2022-03-19 Thread Nilesh Patra
On 19 March 2022 1:56:17 pm IST, Sascha Steinbiss wrote: >Hi Nilesh, > >[…] >> Would it be possible to add a hint to ignore arm64 autopkgtest suite? > >BTW I think this is possible already in the autopkgtest definition [1] by >adding an Architecture: section and leaving out arm64 in the list o

Bug#1007713: ITP: python-railroad-diagrams -- library for generating railroad diagrams - Python port

2022-03-15 Thread Nilesh Patra
Package: wnpp Severity: wishlist Subject: ITP: python-railroad-diagrams -- library for generating railroad diagrams - Python port Package: wnpp Owner: Nilesh Patra Severity: wishlist * Package name: python-railroad-diagrams Version : 1.1.1 Upstream Author : Tab Atkins Jr * URL

Bug#1000336: Upgrading tbb

2022-03-15 Thread Nilesh Patra
On 3/14/22 11:51 AM, Andreas Tille wrote: Hi, Am Mon, Mar 14, 2022 at 12:13:50AM + schrieb Torrance, Douglas: On Sun 13 Mar 2022 04:50:32 PM EDT, M. Zhou wrote: Recently I'm not able to test the build of libtbb-dev's reverse dependencies as my build machine was out of access. That blocks

Bug#1000336: Upgrading tbb

2022-03-13 Thread Nilesh Patra
Hi Mo, On 2/23/22 11:01 AM, M. Zhou wrote: Hello guys. Finally it's all green on our release architectures https://buildd.debian.org/status/package.php?p=onetbb&suite=experimental I shall request the slot for transition once finished the rebuild of its reverse dependencies and filed FTBFS bugs

Bug#1007164: RM: shovill [arm64 ppc64el armhf armel i386 mips64el mipsel ppc64el s390x] -- ROM; Unusable everywhere except amd64

2022-03-12 Thread Nilesh Patra
Package: ftp.debian.org Severity: normal shovill Depends on megahit which is amd64-only and hence shovill is usable only on amd64. Please remove the cruft shovill binaries on !amd64 archs. Regards, Nilesh

Bug#1005479: toil: FTBFS: dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p "3.10 3.9" returned exit code 13

2022-03-10 Thread Nilesh Patra
Hi again, Paul. On 3/10/22 6:28 PM, Nilesh Patra wrote: On Thu, Mar 10, 2022 at 01:09:41PM +0100, Paul Gevers wrote: I was finally able to make time and do this. I first ran admin@ci-worker08:/tmp/toil$ apt source toil/unstable admin@ci-worker08:/tmp/toil/toil-5.6.0$ autopkgtest --shell

Bug#1004516: cwltool breaks toil autopkgtest: No such file or directory: '/home/debci/tmp/tmpgxz5j85g'

2022-03-10 Thread Nilesh Patra
control: reassign -1 toil control: found -1 5.6.0-2 control: fixed -1 5.6.0-4 control: close -1 On Sat, 29 Jan 2022 19:41:25 +0100 Paul Gevers wrote: > [0] You can see what packages were added from the second line of the log > file quoted below. The migration software adds source package from > u

Bug#1004455: python3-mappy: undefined symbol ksw_extz2_sse on several architectures

2022-03-10 Thread Nilesh Patra
Hi Michael, On Fri, 28 Jan 2022 01:17:08 +0200 Adrian Bunk wrote: > This is due to: > > (sid_armhf-dchroot)bunk@amdahl:~$ python3 > Python 3.9.10 (main, Jan 16 2022, 17:12:18) > [GCC 11.2.0] on linux > Type "help", "copyright", "credits" or "license" for more information. > >>> import mappy > T

Bug#1006376: blasr: autopkgtest regression: Segmentation fault

2022-03-10 Thread Nilesh Patra
control: fixed -1 5.3.5+dfsg-4 control: close -1 On Thu, 24 Feb 2022 16:09:55 +0100 Paul Gevers wrote: > Currently this regression is blocking the migration to testing [1]. Can > you please investigate the situation and fix it? This has been fixed with my latest upload, everything is green now.

Bug#1005479: toil: FTBFS: dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p "3.10 3.9" returned exit code 13

2022-03-10 Thread Nilesh Patra
On Thu, Mar 10, 2022 at 01:09:41PM +0100, Paul Gevers wrote: > I was finally able to make time and do this. I first ran > > admin@ci-worker08:/tmp/toil$ apt source toil/unstable > > admin@ci-worker08:/tmp/toil/toil-5.6.0$ autopkgtest --shell --shell-fail . > -- lxc --sudo autopkgtest-unstable-i38

Bug#1006664: Revert?

2022-03-02 Thread Nilesh Patra
> python3-unicodedata2 has disappeared from the NEW queue, has it been > rejected? https://tracker.debian.org/pkg/python-unicodedata2 > Can we go back to 4.28.5-1 ? Not needed now, thanks to Sean for processing it in time Regards, Nilesh signature.asc Description: PGP signature

Bug#1005479: toil: FTBFS: dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p "3.10 3.9" returned exit code 13

2022-03-02 Thread Nilesh Patra
Hi Paul, On 3/2/22 11:51 PM, Paul Gevers wrote: I tried re-triggering it to check once again but looks like runners are not up unfortunately. You mean the salsa ones, right? Yes And so if you could trigger a test suite for this package at your end once, and help debug it, that'd be reall

Bug#1005479: toil: FTBFS: dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p "3.10 3.9" returned exit code 13

2022-03-02 Thread Nilesh Patra
Hi Paul, On 3/2/22 9:09 PM, Paul Gevers wrote: On 02-03-2022 14:58, Nilesh Patra wrote: @Paul, could you please help reproduce this in the debci environment and help us with any clues as to what might be wrong? The autopkgtest command line is at the top of each log. I am aware, and I use

Bug#1005479: toil: FTBFS: dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p "3.10 3.9" returned exit code 13

2022-03-02 Thread Nilesh Patra
control: severity -1 serious control: tags -1 moreinfo On Sat, 19 Feb 2022 19:11:52 +0100 Sascha Steinbiss wrote: > Unfortunately I cannot reproduce this. +1 > toil 5.6.0-2 builds in unstable > with no problems locally (amd64) and on the Reproducible Builds build > cluster [1] on amd64, arm64,

Bug#1000980: kubernetes: Please upgrade to golang-1.17

2022-02-28 Thread Nilesh Patra
On Tue, 8 Feb 2022 18:02:54 + Janos LENART wrote: > I'll get on this. Thanks. Janos, Any updates on this? There is a patch as well in this email[1] Can you please apply and upload? [1]: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1000980#31 Regards, Nilesh signature.asc Description

Bug#1005870: [Resolved] Unable to activate singularity container from within boot service script

2022-02-28 Thread Nilesh Patra
control: fixed -1 3.9.5+ds1-3 control: close -1 As confirmed by the bug reporter, this bug is fixed, hence closing Regards, Nilesh signature.asc Description: PGP signature

Bug#1006536: python-prov fails its autopkgtest with rdflib 6.1.1-1

2022-02-27 Thread Nilesh Patra
Source: python-prov Version: 2.0.0-1 Severity: serious Tags: patch X-Debbugs-Cc: jo...@jones.dk Hi Jonas, With recent upload of rdflib, python-prov fails its autopkgtest as seen here[1] (I did not paste logs as this clutters my terminal really) It is also FTBFS since it runs the same tests at bu

Bug#1005870: Unable to activate singularity container from within boot service script

2022-02-26 Thread Nilesh Patra
On Wed, Feb 23, 2022 at 11:50:30PM +, Fox, Ron wrote: > Thank you we'll give it a try as soon as it migrates out to our internal > mirrors. Ron, Any update on this - if it is there on your internal servers by now? Regards, Nilesh signature.asc Description: PGP signature

Bug#1005459: rdflib: FTBFS: dh_auto_test: error: pybuild --test --test-nose -i python{version} -p "3.10 3.9" returned exit code 13

2022-02-24 Thread Nilesh Patra
On 2/24/22 6:10 PM, Andreas Tille wrote: Sorry for dragging you into this - the experimental branch was way advanced which I learned in bug #995675. This leaves the question how we can proceed. It makes probably sense to run ratt or something like this to learn about packages that are broken.

Bug#1005459: rdflib: FTBFS: dh_auto_test: error: pybuild --test --test-nose -i python{version} -p "3.10 3.9" returned exit code 13

2022-02-24 Thread Nilesh Patra
On 2/24/22 6:00 PM, Nilesh Patra wrote: One really odd thing I noticed is that there is no dh_auto_build is overridden but not triggered inside it again, and so dh_auto_build happening at all. ^ Wow, in a hurry I wrote really sloppy english there I meant

Bug#1005459: rdflib: FTBFS: dh_auto_test: error: pybuild --test --test-nose -i python{version} -p "3.10 3.9" returned exit code 13

2022-02-24 Thread Nilesh Patra
On 2/24/22 3:36 PM, Andreas Tille wrote: Please consider releasing rdflib v6 which in my brief testing is compatible with pyparser v3. I tried to follow your suggestion to upgrade rdflib to version 6 in Git. Unfortunately I'm stumbling upon a different issue in the new test suite[1]. One real

Bug#1005870: Unable to activate singularity container from within boot service script

2022-02-23 Thread Nilesh Patra
On Wed, 16 Feb 2022 12:58:57 + "Fox, Ron" wrote: > On Debian 11 note this comes from debian-unstable. > I am attempting to activate a singularity squashfs image from a script that > runs > at boot time. Singularity segfaults with the attached debug/traceback in > the attached file portmana

Bug#990201: CVE-2021-33622 (was: Re: Accepted singularity-container 3.9.5+ds1-1 (source) into experimental)

2022-02-21 Thread Nilesh Patra
Hi again, On Mon, 21 Feb 2022 01:03:13 +0530 Nilesh Patra wrote: > > So where has this issue bin fixed? > > But yes, you are right, even at Mitre metadata, I do not find any information > about any patch for the bug; i.e. I do not see the "code" that fixes it, and >

Bug#1003773: aerc: please update Homepage (and probably debian/copyright URIs as well)

2022-02-21 Thread Nilesh Patra
Hi Jonas, On Sat, 15 Jan 2022 17:28:59 +0100 Jonas Smedegaard wrote: > Homepage is listed as https://aerc-mail.org which points to > https://git.sr.ht/~sircmpwn/aerc for its source and currently lists > 0.5.2 as its latest release. That link points to the correct source code URL link i.e. https

Bug#990201: CVE-2021-33622 (was: Re: Accepted singularity-container 3.9.5+ds1-1 (source) into experimental)

2022-02-20 Thread Nilesh Patra
Hi Salvatore, On Sun, Feb 20, 2022 at 08:01:34PM +0100, Salvatore Bonaccorso wrote: > >[ Andreas Tille ] > >* Team upload. > >* Version > 3.6.x are closing CVE-2021-33622 > > Closes: #990201 > > Can you help isolate on that? > https://support.sylabs.io/support/solutions/articles/

Bug#1005952: [Pkg-javascript-devel] RFP: libjs-vega -- programmed web graphics with JSON

2022-02-19 Thread Nilesh Patra
On 19 February 2022 7:47:29 pm IST, Yadd wrote: >Package is ready in https://salsa.debian.org/js-team/vega.js > >To build package, remove debian/nodejs/extlinks. This is enough for node-vega >but provides probably broken libjs-vega files (I'm unable to test this but >rollup warns). > >If you

Bug#1005952: [Pkg-javascript-devel] RFP: libjs-vega -- programmed web graphics with JSON

2022-02-19 Thread Nilesh Patra
On 19 February 2022 8:22:24 pm IST, Yadd wrote: >Maybe only d3-array should be updated: > 'quantileSorted' is not exported by > ../../../../../usr/share/nodejs/d3-array/src/index.js, > imported by src/quantiles.js > >I moved debian/nodejs/extlinks to debian/nodejs/extcopies to have better >

Bug#1005952: RFP: libjs-vega -- programmed web graphics with JSON

2022-02-19 Thread Nilesh Patra
Hi Yadd, Gentle ping about this? :-)) It is perfectly OK if you are busy and would not manage On 2/18/22 8:24 PM, Nilesh Patra wrote: control: tags -1 help Hi all, We need this one in for an important med-team package (qiime). Unfortunately, I personally do not have enough bandwidth to

Bug#990201: Update golang-github-appc-cni to 1.0 (was Re: singularity-container: CVE-2021-33622)

2022-02-18 Thread Nilesh Patra
On 2/19/22 2:08 AM, Andreas Tille wrote: Am Fri, Feb 18, 2022 at 11:31:23PM +0530 schrieb Nilesh Patra: | dh_fixperms | chown -c root.root debian/singularity-container/usr/lib/*/singularity/bin/* | chown: changing ownership of 'debian/singularity-container/usr/lib/x86_64-linux-gnu/singul

Bug#990201: singularity-container: CVE-2021-33622

2022-02-18 Thread Nilesh Patra
On 2/18/22 6:01 PM, Andreas Tille wrote: Control: tags -1 help Hi, I updated singularity-container in Salsa to the latest available CE release and added some new Build-Depends. Unfortunately it does not build as you can see in salsa-ci[1]. Any help to get the package build is welcome. I pers

Bug#1005952: RFP: libjs-vega -- programmed web graphics with JSON

2022-02-18 Thread Nilesh Patra
control: tags -1 help Hi all, We need this one in for an important med-team package (qiime). Unfortunately, I personally do not have enough bandwidth to package vega, as this is a large monorepo with a number of plugins in it. If someone on the list could take it, that'd be great. I have CC'ed

Bug#1005011: Please fix capnproto in unstable as well (Was: Re: Bug#1005011: fixed in capnproto 0.9.1-2)

2022-02-16 Thread Nilesh Patra
Tony/Tom, Can you do corresponding fixes for unstable too, or otherwise move experimental release to unstable? Otherwise this bug is causing a un-warranted-for autorm, for example in parsnp[1] [1]: https://tracker.debian.org/pkg/parsnp Regards, Nilesh On Sat, 12 Feb 2022 16:03:40 + Debian

Bug#1005695: ITP: r-cran-spatstat.random -- Random Generation Functionality for the 'spatstat' Family

2022-02-13 Thread Nilesh Patra
Package: wnpp Severity: wishlist Subject: ITP: r-cran-spatstat.random -- Random Generation Functionality for the 'spatstat' Family Package: wnpp Owner: Nilesh Patra Severity: wishlist * Package name: r-cran-spatstat.random Version : 2.1 Upstream Author : Adrian Badde

Bug#991490: r-cran-r2html_2.3.2+dfsg-1_amd64.changes REJECTED

2022-02-12 Thread Nilesh Patra
Hi Thorsten, On Sat, Feb 12, 2022 at 07:00:09PM +, Thorsten Alteholz wrote: > please remove all files licensed under CC-BY-1.0 from the source tarball. > As mentioned in [1] this license is not compatible with DFSG. I have fixed this and uploaded. Please consider to review/accept. Regards, N

Bug#1003567: Please make a separate package for mistune 2.x

2022-02-05 Thread Nilesh Patra
On 2/6/22 12:20 AM, Julian Gilbey wrote: On Fri, Feb 04, 2022 at 09:27:59PM +0530, Nilesh Patra wrote: On 2/4/22 9:18 PM, Julian Gilbey wrote: [...] _mistune.py within the Debian package, and have nbconvert do "import nbconvert.filters._mistune as mistune" (see /usr/lib/python3/dis

Bug#1003567: Please make a separate package for mistune 2.x

2022-02-04 Thread Nilesh Patra
On 2/4/22 9:33 PM, Julian Gilbey wrote: _mistune.py within the Debian package, and have nbconvert do "import nbconvert.filters._mistune as mistune" (see /usr/lib/python3/dist-packages/nbconvert/filters/markdown_mistune.py). That seems like an eminently sensible solution to this problem. But tha

Bug#1003567: Please make a separate package for mistune 2.x

2022-02-04 Thread Nilesh Patra
On 2/4/22 9:18 PM, Julian Gilbey wrote: Basically, the mistune upstream author has completely messed up on this by making what is essentially a completely different package with superficially similar functionality but the same name. True. [...] _mistune.py within the Debian package, and have

Bug#859279: Updating the ygl Uploaders list

2022-01-31 Thread Nilesh Patra
Hi Mattia, Kumar, Kumar, would you have any plans to adopt this? On Wed, 12 Apr 2017 09:27:20 +0200 Mattia Rizzolo wrote: On Wed, Apr 12, 2017 at 12:55:35PM +0530, Prabhu Ramachandran wrote: > I am afraid I don't exactly know what to do or have the bandwidth for stepping > in as a maintainer.

Bug#994867: r-cran-jquerylib_0.1.4+dfsg-1_amd64.changes REJECTED

2022-01-30 Thread Nilesh Patra
Hi Thorsten, > Hi, > the package seems to be broken. > While it depends on libjs-jquery 3.5.* it returns version 3.6.0. Shouldn't it > determine what is really installed on the machine? > For jquery major version 1 and 2 it returns a nonexisting path. I fixed this and uploaded. A quick review/ac

Bug#952169: libmodule-starter-plugin-cgiapp-perl: FTBFS: dh_auto_test: error: perl Build test --verbose 1 returned exit code 1

2022-01-30 Thread Nilesh Patra
r-perl + * d/tests/pkg-perl/SKIP: skip build-deps and syntax.t ++ build-deps is skipped since it seems to be tested on itself ++ syntax.t: One check on titanium/Modules.pm needs fixing upstream + + -- Nilesh Patra Sun, 30 Jan 2022 22:24:46 +0530 + libmodule-starter-plugin-cgiapp-perl (0.44-1)

Bug#1003017: dulwich: autopkgtest regression: src/debian/tests/testsuite3: 10: -m: not found

2022-01-29 Thread Nilesh Patra
36:01.0 + @@ -1,3 +1,10 @@ +dulwich (0.20.31-1.1) unstable; urgency=medium + + * Non-maintainer upload. + * Fix variable name in testsuite (Closes: #1003017) + + -- Nilesh Patra Sat, 29 Jan 2022 23:36:01 + + dulwich (0.20.31-1) unstable; urgency=low * New upstream relea

Bug#995171: [Help] Re: Bug#995171: need newer release

2022-01-27 Thread Nilesh Patra
Hi Andreas, On 1/27/22 3:36 PM, Andreas Tille wrote: Hi, [...] While upgrading golang-github-blang-semver-dev helped to get rid of some error message inside the build log this Great is not the case for the latest version of golang-github-vbauerster-mpb-dev:> [...] -o ./singularity

Bug#864795: RFP: brave-browser -- web browser with privacy and micropayment features

2022-01-26 Thread Nilesh Patra
Hi Ben, On Thu, 15 Jun 2017 09:41:40 +1000 Ben Finney wrote: Package: wnpp Severity: wishlist * Package name: brave-browser Version : 0.16.9 Upstream Author : Brave Software * URL : http://www.brave.com/ * License : Mozilla Public License v2 Programming La

Bug#864795: RFP: brave-browser -- web browser with privacy and micropayment features

2022-01-26 Thread Nilesh Patra
On 1/26/22 1:29 PM, Nilesh Patra wrote: Long time since this ITP is open, just wanted to know if there's something blocking this, and/or if you're working on this anymore? Oops, looks like this was always an RFP, apologies for the noise :) Regards, Nilesh

Bug#1003979: arachne-pnr build-depends on removed package

2022-01-25 Thread Nilesh Patra
Hi peter, On Tue, 18 Jan 2022 21:10:35 + peter green wrote: > Package: arachne-pnr > Version: 0.1+20190728gitc40fb22-2 > Tags: bookworm, sid > Severity: serious > > arachne-pnr build-depends on fpga-icestorm-chipdb which is no longer built by > the fpga-icestorm source package, Admittedly,

Bug#1000435: Matplotlib crashes on mips64el in lines.py

2022-01-25 Thread Nilesh Patra
Sandro, Looks like Yunqiang has a patch that fixed the problem. Can you add this patch and upload? Would you allow them to NMU? (See the mail below) Thanks, -Nilesh On Tue, 25 Jan 2022 16:58:34 +0800 Yunqiang Su wrote: > On Sat, 22 Jan 2022 18:23:13 +0800 YunQiang Su wrote: > > On Sat, 22 Jan

Bug#1003561: mypy breaks python-sop autopkgtest: Missing type parameters for generic type "_SubParsersAction"

2022-01-17 Thread Nilesh Patra
loses: #1003561) + + -- Nilesh Patra Mon, 17 Jan 2022 18:33:40 +0530 + python-sop (0.2.0-1.1) unstable; urgency=medium * Non-maintainer upload. diff -Nru python-sop-0.2.0/debian/patches/fix-test-with-new-mypy.patch python-sop-0.2.0/debian/patches/fix-test-with-new-mypy.patch --- python-sop-

Bug#1003090: RFS: ffcvt/1.7.5-1

2022-01-16 Thread Nilesh Patra
Hi Tong, On 1/16/22 10:41 PM, Tong Sun wrote: I'll remove the build dependency of easygen as planned, as I know for sure it can fix the issue I am not sure if that's the problem here. Why would it fix the issue? [...] config.go:1:1: expected 'package', found 'EOF' which is in turn caused by

Bug#1003090: RFS: ffcvt/1.7.5-1

2022-01-15 Thread Nilesh Patra
Hi Tong, On 1/15/22 2:55 AM, Tong Sun wrote: Hi, The situation should have been fixed with the new upload of easygen. However, the CI build is still failing in salsa. This is something that I don't understand as it builds OK on github. Sorry I've run out of ideas why it is happening like this

Bug#1003623: ITP: angelfish -- Web browser for Plasma Mobile

2022-01-12 Thread Nilesh Patra
Package: wnpp Severity: wishlist Subject: ITP: angelfish -- Web browser for Plasma Mobile Package: wnpp Owner: Nilesh Patra Severity: wishlist * Package name: angelfish Version : 21.06 Upstream Author : Rinigus * URL : https://apps.kde.org/angelfish/ * License

Bug#1002223: simde: FTBFS: dh_auto_test: error: cd clang_test && LC_ALL=C.UTF-8 MESON_TESTTHREADS=4 meson test returned exit code 6

2022-01-10 Thread Nilesh Patra
Control: severity -1 important On Mon, 10 Jan 2022 15:53:01 +0530 Nilesh Patra wrote: > Andreas, > > On Thu, 30 Dec 2021 09:07:08 +0100 Andreas Tille wrote: > > Control: tags -1 upstream > > Control: forwarded -1 https://github.com/simd-everywhere/simde/issues/936 >

Bug#1002223: simde: FTBFS: dh_auto_test: error: cd clang_test && LC_ALL=C.UTF-8 MESON_TESTTHREADS=4 meson test returned exit code 6

2022-01-10 Thread Nilesh Patra
Andreas, On Thu, 30 Dec 2021 09:07:08 +0100 Andreas Tille wrote: > Control: tags -1 upstream > Control: forwarded -1 https://github.com/simd-everywhere/simde/issues/936 > > Hi, > > I'm able to reproduce this issue in a local pbuilder chroot and have > forwarded the issue upstream. Quoting Mich

Bug#1002757: hfd-service: FTBFS: dh_auto_configure: error: cd obj-x86_64-linux-gnu && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTA

2022-01-09 Thread Nilesh Patra
Hi Mike, On Tue, 28 Dec 2021 21:16:12 +0100 Lucas Nussbaum wrote: > Source: hfd-service > Version: 0.1.0-3 > Severity: serious > > -- No package 'libhardware' found > > CMake Warning at CMakeLists.txt:22 (message): > > Bulding without libhybris support, missing required dependencies! > > > >

Bug#998244: lists.debian.org: request for debian-math mailing list

2022-01-02 Thread Nilesh Patra
ord, > > I am also in favor of the creation of this list. I think we could then close > down debian-science-sagem...@alioth-lists.debian.net and move these > discussions to debian-math. > > Best, > Tobias > > On Sat, 13 Nov 2021 16:45:48 +0530 "Nilesh Patra" wrot

Bug#1002142: shasta: FTBFS: PythonModule.cpp:40:29: error: expected primary-expression before ‘(’ token

2021-12-31 Thread Nilesh Patra
forwarded -1 https://github.com/chanzuckerberg/shasta/issues/274 Hopefully upstream fixes it soonish Regards, Nilesh signature.asc Description: PGP signature

Bug#1002587: python3-sage: Depends on unavailable package

2021-12-27 Thread Nilesh Patra
On 12/28/21 12:36 AM, Tobias Hansen wrote: Version: 9.4-1 Hi, memory-allocator passed NEW now. I just did a source-upload for memory-allocator with a bit of polishing. sagemath autopkgtests are failing which do not look exactly because of memory-allocator, taking a look locally. Kind Regard

Bug#1002525: r-cran-tmb: autopkgtest needs update for new version of rmatrix: Package version inconsistency detected.

2021-12-25 Thread Nilesh Patra
control: reassign -1 r-cran-tmb/1.7.22-1 Hi Dirk, On Thu, 23 Dec 2021 14:30:10 -0600 Dirk Eddelbuettel wrote: > passfail > | rmatrixfrom testing1.4-0-1 > | r-cran-tmb from testing1.7.22-1 > | all others from test

Bug#994575: dipy: autopkgtest idea

2021-12-24 Thread Nilesh Patra
On Fri, 17 Dec 2021 16:34:02 +0100 Andreas Tille wrote: > Am Thu, Dec 16, 2021 at 09:10:45PM +0100 schrieb Andreas Tille: > > Hi Étienne, > > > > Am Fri, Sep 17, 2021 at 11:11:03PM +0200 schrieb Étienne Mollier: > > > While working on #983840, I needed to do some testing of the > > > package, and

Bug#1000336: numba: FTBFS with Python 3.10

2021-12-22 Thread Nilesh Patra
Hi all, On Fri, 10 Dec 2021 08:56:49 +0100 Andreas Tille wrote: > dh_auto_clean -O--buildsystem=pybuild > I: pybuild base:237: python3.10 setup.py clean > ... > from distutils import sysconfig > Traceback (most recent call last): > File "/build/numba-0.54.1/setup.py", line 51, in > _gua

Bug#1001992: autopkgtest: Support for non-install test

2021-12-19 Thread Nilesh Patra
Package: autopkgtest Version: 5.17 Severity: wishlist Dear Maintainer, Currently, if I want to test a fixed package on a porter-box machine, there is no way to do so. To elaborate, let's say I have version 'x' of a package 'foo' which fails it's autopkgtest. Now, I fix it locally on a porter box

Bug#1001936: r-cran-rbibutils: Failing autopkgtests on !x86

2021-12-19 Thread Nilesh Patra
Package: r-cran-rbibutils Version: 2.2.4-1 Severity: serious Control: forwarded -1 https://github.com/GeoBosh/rbibutils/issues/8 Dear Maintainer, rbibutils fails its autopkgtests as given below. I have fwded this to upstream. ══ Failed tests ══

Bug#1001663: r-cran-satellite: autopkgtest failure on ppc64el

2021-12-19 Thread Nilesh Patra
control: fixed -1 1.0.4-2 control: close -1 Sebastian, On Mon, 13 Dec 2021 22:36:21 +0100 Sebastian Ramacher wrote: > Source: r-cran-satellite > Version: 1.0.4-1 Since version 1.0.4-2, tests seem to work good[1,2], and this is the current version in testing. So I am closing this Bug Report.

Bug#1001657: Ball fails its autopkgtest - how to properly deal with sip files?

2021-12-16 Thread Nilesh Patra
On 12/16/21 1:24 PM, Andreas Tille wrote: Hi Étienne, Am Wed, Dec 15, 2021 at 11:23:17PM +0100 schrieb Étienne Mollier: I pushed my changes leading to these errors, but getting the other bugs affecting ball fixed before Christmas might involve undoing the setting of SIP_LIBRARIES in d/rules.

Bug#985071: fixed in smalt 0.7.6-10

2021-12-15 Thread Nilesh Patra
control: reopen -1 Hi, On Mon, 13 Dec 2021 18:50:06 + Debian FTP Masters wrote: >[ Andreas Tille ] >* Drop unneeded debian/install >* Make sure sequenceReverseComplement_test is created even if > DEB_BUILD_OPTIONS=nocheck is set This does not seem to take effect. Error sti

Bug#1001657: Ball fails its autopkgtest - how to properly deal with sip files?

2021-12-15 Thread Nilesh Patra
On 15 December 2021 2:36:14 pm IST, Andreas Tille wrote: >Hi Étienne, > >Am Tue, Dec 14, 2021 at 11:13:21PM +0100 schrieb Étienne Mollier: >> Étienne Mollier, on 2021-12-14: >> > However, once the sip file is caught, the package fails to build >> > from source due to various errors in the generate

Bug#1001549: node-mermaid: FTBFS with webpack5: Error: webpack-cli is missing

2021-12-12 Thread Nilesh Patra
control: severity -1 normal Hi, I maintain mermaid in debian On 12/12/21 9:32 AM, Ayoyimika Ajibade wrote: Found debian/nodejs/strip-css-comments/build     cd ./strip-css-comments && sh -ex ../debian/nodejs/strip-css-comments/build + babeljs -o index.cjs index.js Found debian/nodejs/styl

Bug#1000339: r-cran-raster breaks r-cran-satellite autopkgtest: unable to find an inherited method for function 'extend'

2021-12-12 Thread Nilesh Patra
On 11 December 2021 8:53:04 pm IST, Andreas Tille wrote: >Am Sat, Dec 11, 2021 at 02:33:40PM +0530 schrieb Nilesh Patra: >> On 12/11/21 12:14 PM, Nilesh Patra wrote: >> > Tests are still failing, see here[1]. It is not a problem of terra >> > version, as it seems, it i

Bug#1001009: Downloads external files on install

2021-12-11 Thread Nilesh Patra
Hi Tong, On 12/12/21 1:06 AM, Tong Sun wrote: Thank you Nilesh for such detailed explanation. Weighted on all the options, I decided it still needs to go to contrib and have put a note in d/README.Debian -- https://salsa.debian.org/debian/dbab/-/commit/fa771322e1342c532637e17baa863cca8ac80488

Bug#1000339: r-cran-raster breaks r-cran-satellite autopkgtest: unable to find an inherited method for function 'extend'

2021-12-11 Thread Nilesh Patra
On 12/11/21 12:14 PM, Nilesh Patra wrote: control: notfixed -1 r-cran-raster/3.5-9-1 Hi Robert, On 12/11/21 12:10 AM, Nilesh Patra wrote: On 12/10/21 11:43 PM, Robert J. Hijmans wrote: The new release of raster should first update terra if indeed it finds an older version. So let's h

Bug#1000339: r-cran-raster breaks r-cran-satellite autopkgtest: unable to find an inherited method for function 'extend'

2021-12-10 Thread Nilesh Patra
control: notfixed -1 r-cran-raster/3.5-9-1 Hi Robert, On 12/11/21 12:10 AM, Nilesh Patra wrote: On 12/10/21 11:43 PM, Robert J. Hijmans wrote: The new release of raster should first update terra if indeed it finds an older version. So let's hope I am right. I just uploaded the new ve

Bug#1001009: Downloads external files on install

2021-12-10 Thread Nilesh Patra
Hey Tong, On Fri, Dec 10, 2021 at 05:05:03PM -0500, Tong Sun wrote: > dbab moving to contrib is because of this Bug#1001009. I personally have no > idea, but as requested by Andrey. > > I guess it is about this line that is called from the postinst script > https://salsa.debian.org/debian/dbab/-/

Bug#995769: Fwd: dbab_1.5.7-2_source.changes REJECTED

2021-12-10 Thread Nilesh Patra
On 12/11/21 2:30 AM, Tong Sun wrote: Oh, thanks a lot Nilesh! Everything is updated on salsa. pls double check, e.g.: https://salsa.debian.org/debian/dbab/-/commit/4cd8db27cec918244a9fba3d698a7b0123c9f3f9 Just one query: you reason for moving to contrib is not entirely clear to me. You wrote

Bug#995769: Fwd: dbab_1.5.7-2_source.changes REJECTED

2021-12-10 Thread Nilesh Patra
Hi Tong, On Fri, 10 Dec 2021 15:12:20 -0500 Tong Sun wrote: > The Debian FTP Masters explains that it means "DMs may not upload > packages going to NEW. Need to use a sponsor for those". If your changes are updated in salsa, I could help you with sponsoring. Let me know if you'd like some help

Bug#1000339: r-cran-raster breaks r-cran-satellite autopkgtest: unable to find an inherited method for function 'extend'

2021-12-10 Thread Nilesh Patra
control: notfound -1 r-cran-satellite/1.0.4-1 control: fixed -1 r-cran-raster/3.5-9-1 The new release fixes things for me locally, I will check debci and close the bug when debci runs the tests. Please hold on until then. Regards, Nilesh signature.asc Description: PGP signature

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